Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a17
         (756 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         26   1.4  
AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    24   5.8  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   7.7  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        23   7.7  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        23   7.7  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        23   7.7  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        23   7.7  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   7.7  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   7.7  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/46 (28%), Positives = 19/46 (41%)
 Frame = +2

Query: 323 GAHRLWAHRTYKASTELRIVLMLLQTLAGVGPIYNWVRHHRLHHAH 460
           G HR    +  +  + LR V+         G   N + HH+ HH H
Sbjct: 80  GIHRRQIQKWLQVESNLRSVVANGNANREAGMKINLLNHHQHHHQH 125


>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -2

Query: 179 LLSCY*DLFPLLESPLAFRLPFWFLPVSF 93
           LLS    L PLL +P+     FWFLP SF
Sbjct: 11  LLSAAVLLQPLLAAPI-----FWFLPWSF 34


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 437 HHRLHHAHFATENDPF 484
           HH  HH H    ND F
Sbjct: 656 HHHHHHHHHQNPNDHF 671


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 367 CACFVSTVRPKSMSSGRHCEYGGKCQC 287
           C C   T   K+ S+   C   G+C C
Sbjct: 18  CECTTDTTGCKAPSNDAVCSGHGQCNC 44


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 367 CACFVSTVRPKSMSSGRHCEYGGKCQC 287
           C C   T   K+ S+   C   G+C C
Sbjct: 18  CECTTDTTGCKAPSNDAVCSGHGQCNC 44


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 367 CACFVSTVRPKSMSSGRHCEYGGKCQC 287
           C C   T   K+ S+   C   G+C C
Sbjct: 18  CECTTDTTGCKAPSNDAVCSGHGQCNC 44


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 367 CACFVSTVRPKSMSSGRHCEYGGKCQC 287
           C C   T   K+ S+   C   G+C C
Sbjct: 18  CECTTDTTGCKAPSNDAVCSGHGQCNC 44


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 367 CACFVSTVRPKSMSSGRHCEYGGKCQC 287
           C C   T   K+ S+   C   G+C C
Sbjct: 594 CECTTDTTGCKAPSNDAVCSGHGQCNC 620


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 410 VGPIYNWVRHHRLHHAHFATE 472
           V  +  W+R H L  AH  TE
Sbjct: 696 VSAVDRWLREHHLELAHAKTE 716


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,564
Number of Sequences: 2352
Number of extensions: 13648
Number of successful extensions: 38
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)