Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a14
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.0  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +3

Query: 366 NICRFAKKYHMYNCKQSMCLWHEIYNVGSTRSTNWSPRYNTCWWDGIYVKCTFLF 530
           N C+F     +YNC  S  L   +      ++  W  RY T    G+ V+ T LF
Sbjct: 140 NYCQF-----LYNCFHSTLLLMILSRYQRLKAQLWQNRYETV-AHGMTVQKTTLF 188


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -3

Query: 450  CQHYRFHARGTYFVYSCTYGTFWQTCK 370
            C  Y     G Y V++C  G  W   K
Sbjct: 1291 CTRYLHCLWGKYEVFNCAPGLHWDNNK 1317



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = +3

Query: 420  CLW--HEIYNVGSTRSTNWSPRYNTCWW 497
            CLW  +E++N       +W    N C W
Sbjct: 1297 CLWGKYEVFNCAP--GLHWDNNKNICDW 1322


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -3

Query: 429 ARGTYFVYSCTYGTFWQTCKYYSLSC 352
           A+G+   Y+C    +W+ C+    +C
Sbjct: 46  AKGSLKQYTCELKLWWEFCQRNGHNC 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,498
Number of Sequences: 336
Number of extensions: 3523
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)