Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a13
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.1  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 254  AKKLITADETVEELGKQVETLKAELEKAHDKITRLENE 367
            +++L    ET++ L  +V ++ AE  K+H +    +NE
Sbjct: 1458 SRRLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNE 1495


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 254  AKKLITADETVEELGKQVETLKAELEKAHDKITRLENE 367
            +++L    ET++ L  +V ++ AE  K+H +    +NE
Sbjct: 1458 SRRLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNE 1495


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 254  AKKLITADETVEELGKQVETLKAELEKAHDKITRLENE 367
            +++L    ET++ L  +V ++ AE  K+H +    +NE
Sbjct: 1458 SRRLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNE 1495


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 254  AKKLITADETVEELGKQVETLKAELEKAHDKITRLENE 367
            +++L    ET++ L  +V ++ AE  K+H +    +NE
Sbjct: 1458 SRRLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNE 1495


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 579 SRYCKDNSLLCISSLSANASHF 514
           +R C+DN LL ++  S+ ++ F
Sbjct: 248 ARTCRDNRLLVLAGTSSPSNRF 269


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 527 LALNDEIQS-KELSLQYREKRIEQER 601
           + L  E+++ KE++ Q R +R EQER
Sbjct: 59  MKLKKELRAVKEINEQARREREEQER 84


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +3

Query: 135 NLMNI*QQKLYMKPVECN 188
           +L+N+  Q+L +KP++ N
Sbjct: 479 SLLNLDNQQLELKPIDLN 496


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 527 LALNDEIQS-KELSLQYREKRIEQER 601
           + L  E+++ KE++ Q R +R EQER
Sbjct: 210 MKLKKELRAVKEINEQARREREEQER 235


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 527 LALNDEIQS-KELSLQYREKRIEQER 601
           + L  E+++ KE++ Q R +R EQER
Sbjct: 269 MKLKKELRAVKEINEQARREREEQER 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,099
Number of Sequences: 336
Number of extensions: 2529
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)