Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11a13
(691 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 44 6e-06
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 37 7e-04
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 36 0.001
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 36 0.002
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 27 0.74
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 26 0.97
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 25 1.7
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 24 5.2
AY553322-1|AAT36323.1| 426|Anopheles gambiae G-protein coupled ... 23 6.9
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 43.6 bits (98), Expect = 6e-06
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Frame = +2
Query: 26 TESETGANHLKNVLSEAEINNLSNNVVQKINDYIESKFDEYLTAKALHETSRVQLGEKIA 205
TE + K + + +IN L + K++ I E T++ + S+ +KI
Sbjct: 884 TEQINEITNSKVKVLQTKINGLGKQI-DKLSANISKLTVEIKTSERNVQKSK----DKIN 938
Query: 206 VLESEVLEKTAKYEDAAKKLITADETVEELGKQVETLKAELEKAHDKITRLENEIISLKS 385
+E EV + + +E +L +++E +K +EKAH+ + ++ EI++L+
Sbjct: 939 SMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQK 998
Query: 386 ARDSAVDERNDLTRILQRRDAEIERLTTNDTALSQQLRAAIDAKCEALALNDEIQSKELS 565
+R + +ILQ + +++ T DT QL+ K L E +E
Sbjct: 999 REAEGKMKRLEFEQILQTIETKLQE--TKDTLPHWQLQ----LKPLKLHEIPEEPPQEPL 1052
Query: 566 LQYREKRIEQERTL-LNSQIAGLTEEVNRLTSELQTV 673
+Y E+ ++ + L QI+ L E++N L +
Sbjct: 1053 KEYTEEELDSYKLPDLQYQISILEEKLNANKPNLSVI 1089
Score = 25.8 bits (54), Expect = 1.3
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 140 DEYLTAKALHETSRVQLGEKIAVLESEVLEKTA-KYEDAAKKLITADETVEELGKQVETL 316
DE +A ++ E S +++ + V E LE YE+ K L ++ L + +
Sbjct: 481 DESKSALSIAE-SELKICQHDEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVT 539
Query: 317 KAELEKAHDKITRLENE 367
+ ELE A K+ NE
Sbjct: 540 RTELETAKQKLQENANE 556
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 36.7 bits (81), Expect = 7e-04
Identities = 49/228 (21%), Positives = 96/228 (42%), Gaps = 12/228 (5%)
Frame = +2
Query: 14 KMEATESETGANHLKNVLSEAEINNLSNNVVQKINDYIESKFDEYLTAKALHETSRVQLG 193
K+E T G ++ + E+NNL + Q + + +E + + V+
Sbjct: 702 KIEKTAHRFGQLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEAR 761
Query: 194 EKIAVLESEVLEKTAKYEDAA----KKLITADETVEELGKQVETLKAELEKAHDKITRLE 361
E ++V + AK D ++L +A+E ++ K+ E + +K L+
Sbjct: 762 ETQTQCSAKVKDLQAKIADGKGHRERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLK 821
Query: 362 NEIISLK----SARDSAVDERNDLTRILQRR---DAEIERLTTNDTALSQQLRAAIDAKC 520
EI L+ +A++ AV + + QR + +T TAL QQ+ K
Sbjct: 822 LEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQI------KQ 875
Query: 521 EALALNDEIQSKELSLQYREK-RIEQERTLLNSQIAGLTEEVNRLTSE 661
+N QSKEL +Y ++ ++ ++ L +I E+ ++ +E
Sbjct: 876 HKEKMNS--QSKELKAKYHQRDKLLKQNDELKLEIKKKENEITKVRNE 921
Score = 35.1 bits (77), Expect = 0.002
Identities = 42/206 (20%), Positives = 91/206 (44%), Gaps = 4/206 (1%)
Frame = +2
Query: 62 VLSEAEINNLSNNVVQKINDYIESKFDEYLTAKALHETSRVQLGEKIAVLESEVLEKTAK 241
+L AEIN + + +K + + + K H QL E+ +L E+ K
Sbjct: 673 LLDVAEINRIQAMLQEKEAELRDISAEVSKIEKTAHRFG--QLKEQHDMLNYEL--NNLK 728
Query: 242 YEDAAKKLITADETVEELGKQVETLKAELEKAHDKITRLENEIISLKSARDSAVDERNDL 421
A E +EEL K++ETL+ + +A + T+ ++ K + D +
Sbjct: 729 QRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKV---KDLQAKIADGKGHR 785
Query: 422 TRILQRRDAEIERLTTNDTALSQQLRAAIDAKCEALALN-DEIQSKELSLQYREKRIEQE 598
R L+ + +++R + + S++ + E L L +E+Q ++ + + ++E++
Sbjct: 786 ERELKSAEEDLKR-SKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQ 844
Query: 599 RTLLNS---QIAGLTEEVNRLTSELQ 667
L +++G T+E+ + L+
Sbjct: 845 IAALQQRLVEVSGTTDEMTAAVTALK 870
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 36.3 bits (80), Expect = 0.001
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +2
Query: 353 RLENEIISLKSARDSAVDERNDLTRILQRRDAEIER----LTTNDTALSQQLRAAIDAKC 520
+L+ E+ L SA + ++TR L +R +++ L TN+ L Q + +
Sbjct: 720 QLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQLAGVVFEGET 779
Query: 521 EALALNDEIQSKELSLQYREKRIEQERTLLN 613
E L +E++ L +K IE+E+ L+
Sbjct: 780 EETTLREELEHSRTILAKLQKGIEEEQAKLD 810
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 35.5 bits (78), Expect = 0.002
Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 7/167 (4%)
Frame = +2
Query: 188 LGEKIAVLESEVLEKTAKYEDAAKKLITADETVEELGKQVETLKAELEKAHDKITRLENE 367
L ++I + + +DA K ++TA + L + + L E K I+ L +E
Sbjct: 256 LTQEIQKAQDRLKNAQKALKDAKKDVVTAKDEKSVLATEHQQLLREKTKLDLTISDLSDE 315
Query: 368 IISLKSARDSAVDERNDLTRILQRRDAEIERLTTNDTAL-------SQQLRAAIDAKCEA 526
+ +++ A E L + ++ E+E++ A+ S++L + E
Sbjct: 316 VQGDNKSKERAEQELERLKITIAEKEKELEQVRPRYEAMRRKEEECSRELNLKEQKRKEL 375
Query: 527 LALNDEIQSKELSLQYREKRIEQERTLLNSQIAGLTEEVNRLTSELQ 667
A S+ S + R+K I+ E LN QI N+L +L+
Sbjct: 376 YAKQGR-GSQFSSKEERDKWIQGELKSLNKQIKDKISHQNKLQDDLK 421
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 26.6 bits (56), Expect = 0.74
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +2
Query: 272 ADETVEELGKQVETLKAELEKAHDKITRLENEIISLKSARDSAVDERNDLTRILQRRDAE 451
A + + E T ELE I RLE + ++K +++ + ++LQ E
Sbjct: 99 ASKPIAEPKAASATPAPELELLRATIQRLEEQNCAMKEQNAKLLEQITGMCQLLQEEKEE 158
Query: 452 IERLTTNDTALSQQLRAA 505
+R A ++L AA
Sbjct: 159 AKRREEKLEAQMEKLAAA 176
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 26.2 bits (55), Expect = 0.97
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 278 ETVEELGKQVETLKAELEK---AHDKITRLENEIISLKSA-RDSAVDERNDLTRILQRRD 445
E EE ++ E LKA++EK AH + L N +++ K A + R T + +R
Sbjct: 130 EEKEEAKRREEKLKAQMEKLAAAHQRDRNLLNSLLAAKVAGGQPSASSRQPPTPLPRRSS 189
Query: 446 AE 451
A+
Sbjct: 190 AQ 191
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 25.4 bits (53), Expect = 1.7
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 299 KQVETLKAELEKAHDKITRLENEIISLKSARDSAVDERNDLTRILQRRDA---EIERLTT 469
+++ L+A LEK ++I L ++LK S E +L +L+R + E E + +
Sbjct: 94 REIIDLEARLEKTENEILELSQNAVNLK----SNYLELTELKHVLERTQSFFFEQEVIVS 149
Query: 470 NDTALS 487
D A S
Sbjct: 150 TDAAKS 155
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 23.8 bits (49), Expect = 5.2
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Frame = +2
Query: 179 RVQLGE-KIAVLESEVLEKTAKYEDAAK-KLITADETVEELG---KQVETLKAELEKAHD 343
+V++G+ KI ++ E L K ED K K+ AD+T+E + T++ + +
Sbjct: 399 KVKVGQSKILLILHEPLTK----EDWIKIKVEKADQTIEITNIKRRNPYTIQFSVPEVCM 454
Query: 344 KIT-----RLENEIISLKSARDSAVDERNDLTRILQRRDAEIERLTTNDTALSQQLRAAI 508
+I+ RLE I L S + +L +IL +DA +E L LS R +
Sbjct: 455 EISMMIKIRLEKNSIDLGSRPLKCESQMRELEQILSSKDAPME-LICQSVGLSTNDRDKL 513
Query: 509 D 511
D
Sbjct: 514 D 514
>AY553322-1|AAT36323.1| 426|Anopheles gambiae G-protein coupled
receptor 4 protein.
Length = 426
Score = 23.4 bits (48), Expect = 6.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 189 SCTLLVSCRAFAVRYSSNFDSI*SLIFCTTLLDKLLISASDK 64
+C + + RAF + SSN SL C ++ L +SA+ K
Sbjct: 149 ACKVFLFMRAFCLYLSSNVLVCVSLDRCFAVIYPLRVSAARK 190
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,436
Number of Sequences: 2352
Number of extensions: 10453
Number of successful extensions: 34
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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