Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11a12
(543 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g02160.1 68414.m00143 expressed protein 43 2e-04
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 31 0.38
At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR... 31 0.66
At5g09570.1 68418.m01108 expressed protein contains Pfam domain,... 29 2.7
At4g16920.1 68417.m02552 disease resistance protein (TIR-NBS-LRR... 29 2.7
At3g22435.1 68416.m02835 XS domain-containing protein contains P... 29 2.7
At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putati... 29 2.7
At4g16950.2 68417.m02557 disease resistance protein (TIR-NBS-LRR... 28 3.5
At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR... 28 3.5
At1g44030.1 68414.m05079 DC1 domain-containing protein contains ... 28 4.6
At1g44020.1 68414.m05078 DC1 domain-containing protein contains ... 28 4.6
At1g68570.1 68414.m07834 proton-dependent oligopeptide transport... 27 6.1
>At1g02160.1 68414.m00143 expressed protein
Length = 71
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 168 NPCLTEQEQSYKCLDKNGFDHAKCEEYFENYNTCKK 275
+PC + S KCL++ G D +KC+++F+ Y CKK
Sbjct: 19 SPCYLQYSASLKCLEEFGSDKSKCQDHFDVYKECKK 54
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase family
protein similar to Potential phospholipid-transporting
ATPase (EC 3.6.3.1) from Homo sapiens [SP|Q9Y2Q0,
SP|O43520], Mus musculus [SP|P98200, SP|P70704], {Bos
taurus} SP|Q29449; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase
Length = 1184
Score = 31.5 bits (68), Expect = 0.38
Identities = 25/84 (29%), Positives = 35/84 (41%)
Frame = -2
Query: 413 NERFNFLLFSFNGLKIGCFYFFPLFNLWQVRLYTLCFSVFVHFSPKLFAGVIIFEILLAF 234
N F F LF + F P +N W + LY SVF P + G+ ++ F
Sbjct: 931 NITFGFTLFLYEAYT--SFSATPAYNDWYLSLY----SVFFTSLPVICLGIFDQDVSAPF 984
Query: 233 CVIKTIFIQTFVRLFLFCKTRIQS 162
C+ + Q V+ LF RI S
Sbjct: 985 CLKFPVLYQEGVQNLLFSWRRILS 1008
>At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1147
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 225 DHAKCEEYFENYN-TCKKFWGKVYKDRKAKGIQPYLPE 335
DH C EN TC++FW ++Y +R ++ I Y E
Sbjct: 1093 DHVSCVPLSENIEYTCERFWDELY-ERNSRSIFSYKDE 1129
>At5g09570.1 68418.m01108 expressed protein contains Pfam domain,
PF04933: Protein of unknown function (DUF657)
Length = 139
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 156 AERLNPCLTEQEQSYKCLDKNGFDHAKCEEYFENYNTCKKFWGKV 290
A + C + C++ G D +KC+ Y + + CKK G V
Sbjct: 92 ANTMTACDIHSKAFQDCVNHFGSDISKCQFYMDMLSECKKNSGSV 136
>At4g16920.1 68417.m02552 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1304
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 225 DHAKCEEYFENYN-TCKKFWGKVYKD 299
DH C EN TC++FW +Y D
Sbjct: 1166 DHVSCVPLSENIEYTCERFWDALYDD 1191
>At3g22435.1 68416.m02835 XS domain-containing protein contains Pfam
profile PF03468: XS domain
Length = 183
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 210 DKNGF-DHAKCEEYFENYNTCKKFWGKVYKDRKAKGIQ--PYLPEVEERKEIKAAYF 371
D +G D + EYFE N +K WG+V +K + P L EV+ R K F
Sbjct: 94 DDSGLRDAMRMAEYFEKINRGRKSWGRVQPLTPSKDDEKNPGLVEVDGRTGEKKRIF 150
>At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putative
(COX6b) nearly identical to subunit 6b of cytochrome c
oxidase [Arabidopsis thaliana] GI:6518353
Length = 191
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 174 CLTEQEQSYKCLDKNGFDHAKCEEYFENYNT-CKKFWGKVYKDRKAKGIQP 323
C T + ++C+ G D +C+++ + Y + C W + +++ G P
Sbjct: 137 CFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVDRWNEQRENGTFP 187
>At4g16950.2 68417.m02557 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.; closest
homolog in Col-0 to RPP5 of clutivar Landsberg erecta.
Length = 1404
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 225 DHAKCEEYFENYN-TCKKFWGKVYKD 299
D C EN TC++FWG++Y D
Sbjct: 1172 DSVSCVPLSENIEYTCERFWGELYGD 1197
>At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.; closest
homolog in Col-0 to RPP5 of clutivar Landsberg erecta.
Length = 1449
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 225 DHAKCEEYFENYN-TCKKFWGKVYKD 299
D C EN TC++FWG++Y D
Sbjct: 1172 DSVSCVPLSENIEYTCERFWGELYGD 1197
>At1g44030.1 68414.m05079 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 597
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 150 KNAERLNPCLTEQEQSYKCLDKNGFDHAKCEE 245
KN RL E + C D NG DH +CE+
Sbjct: 313 KNKHRLYLESGEDASHFLCKDCNGEDHVECEK 344
>At1g44020.1 68414.m05078 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 577
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 150 KNAERLNPCLTEQEQSYKCLDKNGFDHAKCEE 245
+N RL E+ + C D NG DH +CE+
Sbjct: 293 ENRHRLYLAKGEEASHFICKDCNGEDHIECEK 324
>At1g68570.1 68414.m07834 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 596
Score = 27.5 bits (58), Expect = 6.1
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -3
Query: 517 FIFMEKICS*NFVLNFLITQTISMINKIHLKIT*TMKDLIFY--YSPLTALK*AAFISFL 344
FIF +IC V+ F + ++HL +T L + S LT L AFI+
Sbjct: 32 FIFANEICEKLAVVGFHANMISYLTTQLHLPLTKAANTLTNFAGTSSLTPLL-GAFIA-- 88
Query: 343 SSTSGRYGCIPFAFLSLYTFPQNFLQV 263
S +GR+ I FA + +Y L +
Sbjct: 89 DSFAGRFWTITFASI-IYQIGMTLLTI 114
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,666,414
Number of Sequences: 28952
Number of extensions: 190177
Number of successful extensions: 499
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1013649368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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