Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11a11
(556 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 326 7e-90
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 322 2e-88
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 322 2e-88
SB_56| Best HMM Match : Actin (HMM E-Value=0) 320 5e-88
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 319 1e-87
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 1e-37
SB_54| Best HMM Match : Actin (HMM E-Value=0) 106 1e-23
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 91 4e-19
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 77 7e-15
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 1e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 3e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.001
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.48
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.48
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.48
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.48
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.48
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.63
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.63
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.84
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.84
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.1
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.1
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.1
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.1
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 1.5
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 2.6
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 2.6
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 326 bits (801), Expect = 7e-90
Identities = 150/154 (97%), Positives = 154/154 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 274
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 275 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 454
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 455 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 556
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVM 154
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 322 bits (790), Expect = 2e-88
Identities = 149/154 (96%), Positives = 153/154 (99%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 274
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 275 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 454
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 455 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 556
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVM 154
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 322 bits (790), Expect = 2e-88
Identities = 147/154 (95%), Positives = 153/154 (99%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 274
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 275 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 454
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 455 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 556
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVM 154
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 320 bits (786), Expect = 5e-88
Identities = 148/152 (97%), Positives = 152/152 (100%)
Frame = +2
Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 281 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 461 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 556
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVM 153
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 319 bits (783), Expect = 1e-87
Identities = 147/152 (96%), Positives = 152/152 (100%)
Frame = +2
Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 281 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 461 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 556
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVM 153
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +2
Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 281 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 367
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +2
Query: 440 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 556
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVM 116
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 153 bits (370), Expect = 1e-37
Identities = 72/151 (47%), Positives = 101/151 (66%), Gaps = 3/151 (1%)
Frame = +2
Query: 113 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 286
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 287 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 463
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 464 MFETFNTPAMYVAIQAVLSLYASGRTTGIVL 556
MFE + +Y+AIQAVL+LYA G TG+V+
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVI 157
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 106 bits (254), Expect = 1e-23
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 347 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 526
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 527 ASGRTTGIV 553
ASGRTTG V
Sbjct: 2189 ASGRTTGTV 2197
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 220
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 91.5 bits (217), Expect = 4e-19
Identities = 38/54 (70%), Positives = 49/54 (90%)
Frame = +2
Query: 395 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 556
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VL
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVL 179
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 77.4 bits (182), Expect = 7e-15
Identities = 31/84 (36%), Positives = 56/84 (66%)
Frame = +2
Query: 305 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 484
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 485 PAMYVAIQAVLSLYASGRTTGIVL 556
PA ++ +VL+ +A+GR+ G+V+
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVI 86
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 220
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +2
Query: 461 IMFETFNTPAMYVAIQAVLSLYASGRTTGIV 553
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVV 31
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 89 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 259
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 260 GDEAQSKRGILTL 298
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +2
Query: 233 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 412
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 107 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 286
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 287 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 376
L Y P + G + NWD ++IW +TF E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 217 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 101
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 350 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 529
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 530 SGRTTGIV 553
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 296 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 448
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 437 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 553
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.48
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 340 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 164
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 163 CETGLAHT 140
CET L T
Sbjct: 252 CETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.63
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 340 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 164
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 163 CETGLAHT 140
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.63
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 340 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 164
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 163 CETGLAHT 140
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.63
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 340 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 164
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 163 CETGLAHT 140
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 0.84
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 340 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 164
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 163 CETGLAHT 140
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 0.84
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 340 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 164
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 163 CETGLAHT 140
CET L T
Sbjct: 288 CETQLVLT 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 340 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 164
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 163 CETGLAHT 140
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 367 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 200
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 199 DRGEHGARSIISCETGLAHT 140
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 421 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 513
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 367 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 200
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 199 DRGEHGARSIISCETGLAHT 140
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 367 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 200
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 199 DRGEHGARSIISCETGLAHT 140
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 367 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 200
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 199 DRGEHGARSIISCETGLAHT 140
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 501 PSKPCSRCTRPVVPP 545
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 367 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 200
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 199 DRGEHGARSIISCETGLAHT 140
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 367 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 200
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 199 DRGEHGARSIISCETGLAHT 140
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 1.5
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -1
Query: 280 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 116
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 115 GNFFVAHLELVK 80
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 274 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 340 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 164
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 163 CETGLAHT 140
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 340 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 164
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 163 CETGLAHT 140
CET L T
Sbjct: 61 CETQLVLT 68
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 425 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 553
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 486 PPCTSPSKPCSRCTRPVVPPVSC 554
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 207 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 97
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 274 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 263 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 117
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -3
Query: 269 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 99
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,502,586
Number of Sequences: 59808
Number of extensions: 507656
Number of successful extensions: 1743
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1288581898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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