Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a08
         (633 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione s...    30   1.2  
Z93379-1|CAB07589.1|  218|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z73426-6|CAA97796.2|  853|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z73425-9|CAA97791.2|  853|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z81479-4|CAB03939.1|  116|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AC006723-1|AAF59429.3|  534|Caenorhabditis elegans Hypothetical ...    27   8.4  

>AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione
           s-transferase protein34 protein.
          Length = 218

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
 Frame = +3

Query: 294 EDETKQVHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMASGPNSPVQ-TEQ 464
           E+E K++HD++ +   + ++ ++ ++ KE    +  GD + W ++ +A    S     E 
Sbjct: 124 EEEVKRIHDEVYIPVKNLLFKILTRILKESKSEYLVGDGLTWADLVVADHLYSLTNIKEL 183

Query: 465 DIEDIFGDSLKTW 503
           D ED    +LK +
Sbjct: 184 DPEDPIHLNLKKY 196


>Z93379-1|CAB07589.1|  218|Caenorhabditis elegans Hypothetical
           protein F21H7.1 protein.
          Length = 218

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 297 DETKQVHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMA 431
           +E KQ+HDK+ +   + ++ ++ ++ KE       GD + W ++ +A
Sbjct: 125 EEVKQIHDKVYIPAKNLMFKILTRILKENKSGFLVGDGLTWADLVVA 171


>Z73426-6|CAA97796.2|  853|Caenorhabditis elegans Hypothetical
           protein F12F6.1 protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 420 IEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKKNTFHDAI 551
           +E A+G  +P+  +   + +F D++  +    D AK+N  HDA+
Sbjct: 345 LEAANG-QAPIYAQSLAKILFADTIMMYFKDQDTAKRNWLHDAV 387


>Z73425-9|CAA97791.2|  853|Caenorhabditis elegans Hypothetical
           protein F12F6.1 protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 420 IEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKKNTFHDAI 551
           +E A+G  +P+  +   + +F D++  +    D AK+N  HDA+
Sbjct: 345 LEAANG-QAPIYAQSLAKILFADTIMMYFKDQDTAKRNWLHDAV 387


>Z81479-4|CAB03939.1|  116|Caenorhabditis elegans Hypothetical
           protein C34F6.5 protein.
          Length = 116

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +3

Query: 414 KNIEMASGPNSP----VQTEQDIEDIFGDSLKTWDHFTDDAKKN 533
           +N+E A+GP+ P    VQ EQD+E+I  D  +  D   +D  +N
Sbjct: 37  RNMEHAAGPSPPVEQGVQLEQDLEEII-DIHEVDDEEEEDEDQN 79


>AC006723-1|AAF59429.3|  534|Caenorhabditis elegans Hypothetical
           protein Y19D10B.2 protein.
          Length = 534

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 408 VWKNIEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTD 518
           V+ N+E+  GPNS + T + IE IFG  +    + TD
Sbjct: 135 VFGNVEI--GPNSNLDTMKSIEIIFGSLIINETNLTD 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,118,306
Number of Sequences: 27780
Number of extensions: 216234
Number of successful extensions: 626
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)