Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a05
         (671 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DD84EF Cluster: PREDICTED: hypothetical protein;...    36   0.67 
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031...    36   0.67 
UniRef50_UPI0000E218A0 Cluster: PREDICTED: hypothetical protein;...    36   1.2  
UniRef50_UPI0000EB29E7 Cluster: UPI0000EB29E7 related cluster; n...    34   2.7  
UniRef50_Q6ZPE9 Cluster: MKIAA3013 protein; n=7; Mus musculus|Re...    34   2.7  
UniRef50_Q3JT18 Cluster: Flavoprotein reductase; n=2; Burkholder...    34   3.6  
UniRef50_Q58S78 Cluster: 1,2,4-benzenetriol 1,2-dioxygenase; n=1...    34   3.6  
UniRef50_Q5JQU2 Cluster: OSJNBa0061C06.11 protein; n=1; Oryza sa...    33   4.8  
UniRef50_UPI0000DB732E Cluster: PREDICTED: hypothetical protein,...    33   6.3  

>UniRef50_UPI0000DD84EF Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 301

 Score = 36.3 bits (80), Expect = 0.67
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 198 HYGYARLSGRESSRRVTSVARPV--QRPSDVAGRRRP-SHRAHATPATCWGGRVARGYPG 28
           H G+ R   R  +RRV S  RP+   RP   +G+  P +HRA       WGG    G PG
Sbjct: 199 HPGHTRRCRRSEARRVHSPRRPLPSSRPEGRSGQGAPAAHRAPTWGRGGWGGAGPPGGPG 258

Query: 27  T 25
           +
Sbjct: 259 S 259


>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
           OJ1031_C12.31; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
          Length = 214

 Score = 36.3 bits (80), Expect = 0.67
 Identities = 28/76 (36%), Positives = 36/76 (47%)
 Frame = -3

Query: 255 FIYVNSSFTT*SRVQNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHA 76
           F+ V+  F    RV++KV H   AR SG +  +R  +V RP      V  RRR    A +
Sbjct: 2   FVRVSCMFV---RVRSKVVHVSGARDSGVQWRQRRGAVGRP----GGVGARRRGGAAAAS 54

Query: 75  TPATCWGGRVARGYPG 28
            PA C  G V  G  G
Sbjct: 55  GPAACGRGGVVEGPSG 70


>UniRef50_UPI0000E218A0 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 350

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 10  AAQRDCARVPACNATA-PTCGWGRVGPVRRPAASSDVARPL 129
           AAQ +   V +  ATA P CGWGR    +RP AS+    PL
Sbjct: 31  AAQHETNPVLSLEATARPWCGWGRTDTAQRPPASTGHGFPL 71


>UniRef50_UPI0000EB29E7 Cluster: UPI0000EB29E7 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB29E7 UniRef100
           entry - Canis familiaris
          Length = 551

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 109 WTPPAVAPGPRDPSHML-GRSRCTRVPWHSPAALPEC 2
           W+PP ++PGPR  S ++  R R    P  SP A P C
Sbjct: 370 WSPPGISPGPRLASPLVPARHRPRSPPGISPGAHPAC 406


>UniRef50_Q6ZPE9 Cluster: MKIAA3013 protein; n=7; Mus musculus|Rep:
           MKIAA3013 protein - Mus musculus (Mouse)
          Length = 1461

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -3

Query: 246 VNSSFTT*SRV--QNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHAT 73
           V SS  T S+   +N VPH    +LS   +  +V +VA+P +   D A + R       +
Sbjct: 789 VESSANTDSKQLSENSVPHSSEDKLSSDPAVEKVETVAQPAESLVDKAPKPRTRRSRFHS 848

Query: 72  PATCW 58
           P+T W
Sbjct: 849 PSTTW 853


>UniRef50_Q3JT18 Cluster: Flavoprotein reductase; n=2;
           Burkholderia|Rep: Flavoprotein reductase - Burkholderia
           pseudomallei (strain 1710b)
          Length = 421

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 19/40 (47%), Positives = 20/40 (50%)
 Frame = -3

Query: 159 RRVTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVAR 40
           RR +S  RP  RP   A RR    RA A PA C G R  R
Sbjct: 335 RRRSSGTRPTPRPPRDAVRRSAIRRAAARPARCTGARTDR 374


>UniRef50_Q58S78 Cluster: 1,2,4-benzenetriol 1,2-dioxygenase; n=1;
           Arthrobacter sp. PNP2|Rep: 1,2,4-benzenetriol
           1,2-dioxygenase - Arthrobacter sp. PNP2
          Length = 180

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 106 TPPAVAPGPRDPSHMLGR-SRCTRVPWHSPAALPEC 2
           TP   AP PR PS   G+ +RC R P    +ALP C
Sbjct: 110 TPSGDAPPPRTPSRTTGQWARCLRRPGAHQSALPTC 145


>UniRef50_Q5JQU2 Cluster: OSJNBa0061C06.11 protein; n=1; Oryza
           sativa|Rep: OSJNBa0061C06.11 protein - Oryza sativa
           (Rice)
          Length = 251

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 18/36 (50%), Positives = 19/36 (52%)
 Frame = -3

Query: 144 VARPVQRPSDVAGRRRPSHRAHATPATCWGGRVARG 37
           VA    R  D A RRRP+    AT A C GGR  RG
Sbjct: 95  VAAARGRELDTARRRRPAEEEEATVAGCAGGRGGRG 130


>UniRef50_UPI0000DB732E Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Apis mellifera|Rep: PREDICTED:
           hypothetical protein, partial - Apis mellifera
          Length = 72

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = -3

Query: 207 KVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVARGYPG 28
           K+P +   R   R+++R V +  R  +R S   GR  PS RAH  P  C   +++R  PG
Sbjct: 12  KIPQHSNGR---RKTTRSVCTWDRGSRRTSR-CGRGSPSTRAHPNPDRCNNRQLSRDIPG 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,913,470
Number of Sequences: 1657284
Number of extensions: 11270707
Number of successful extensions: 33891
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33867
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)