Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a03
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.6  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 126 IWTKKINICSELHTTLPATITRNRRTTKYPSTSWTC 233
           IW  + N   E  T + +T++RN  T  YP T  TC
Sbjct: 29  IWYWQCNTDEETCTRISSTVSRN--TDTYP-TLETC 61


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 451 SSILFVLWMRRRW 413
           S++L  LW RRR+
Sbjct: 54  STVLLALWTRRRY 66


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 134 EEDQHLFRAAYDTPSYDHEEQED 202
           E+++ + R  Y    Y+H  +ED
Sbjct: 314 EQEELIHRLVYFQNEYEHPSEED 336


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 260 PSQPKDRLSTSPACRGIFRC 201
           P+    RL+T   CR + RC
Sbjct: 38  PADEYFRLTTEGDCRDVVRC 57


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 260 PSQPKDRLSTSPACRGIFRC 201
           P+    RL+T   CR + RC
Sbjct: 38  PADEYFRLTTEGDCRDVVRC 57


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +3

Query: 81   CFLTQFHQDTCLDILIWTKKINIC 152
            C L +  +  C   L W K+  IC
Sbjct: 1121 CVLGELRKQYCAGGLHWNKERKIC 1144


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = -3

Query: 323 IWWRACSRRG 294
           +WW  C R G
Sbjct: 59  LWWEFCQRNG 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,241
Number of Sequences: 336
Number of extensions: 2928
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)