Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11a03
(634 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83477-1|BAA11923.1| 1367|Drosophila melanogaster TamA protein. 30 2.3
AY061056-1|AAL28604.1| 487|Drosophila melanogaster LD02541p pro... 30 2.3
AE014297-834|AAF54300.3| 1371|Drosophila melanogaster CG31349-PB... 30 2.3
AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC... 30 2.3
AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA... 30 2.3
M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein... 29 5.2
BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p pro... 29 5.2
AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p pro... 29 5.2
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P... 29 5.2
AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB... 29 5.2
AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA... 29 5.2
AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD... 29 5.2
AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC... 29 5.2
>D83477-1|BAA11923.1| 1367|Drosophila melanogaster TamA protein.
Length = 1367
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 404 HYQPTPSHPQYEQYAGPQYGAPQHGY 481
+Y PTPSH Y Q A P G+P +G+
Sbjct: 1237 YYPPTPSHHHYGQQATP--GSPSNGH 1260
>AY061056-1|AAL28604.1| 487|Drosophila melanogaster LD02541p
protein.
Length = 487
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 404 HYQPTPSHPQYEQYAGPQYGAPQHGY 481
+Y PTPSH Y Q A P G+P +G+
Sbjct: 357 YYPPTPSHHHYGQQATP--GSPSNGH 380
>AE014297-834|AAF54300.3| 1371|Drosophila melanogaster CG31349-PB,
isoform B protein.
Length = 1371
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 404 HYQPTPSHPQYEQYAGPQYGAPQHGY 481
+Y PTPSH Y Q A P G+P +G+
Sbjct: 1241 YYPPTPSHHHYGQQATP--GSPSNGH 1264
>AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC,
isoform C protein.
Length = 1293
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 404 HYQPTPSHPQYEQYAGPQYGAPQHGY 481
+Y PTPSH Y Q A P G+P +G+
Sbjct: 1163 YYPPTPSHHHYGQQATP--GSPSNGH 1186
>AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA,
isoform A protein.
Length = 2090
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 404 HYQPTPSHPQYEQYAGPQYGAPQHGY 481
+Y PTPSH Y Q A P G+P +G+
Sbjct: 1163 YYPPTPSHHHYGQQATP--GSPSNGH 1186
>M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein
protein.
Length = 1638
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 413 PTPSHPQYEQYAGPQYGAPQHGYDPYYGH 499
P+P P Q GP G P G+ YGH
Sbjct: 29 PSPHSPYPHQQPGPLQGPPPPGHPGAYGH 57
>BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p
protein.
Length = 1634
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 413 PTPSHPQYEQYAGPQYGAPQHGYDPYYGH 499
P+P P Q GP G P G+ YGH
Sbjct: 29 PSPHSPYPHQQPGPLQGPPPPGHPGAYGH 57
>AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p
protein.
Length = 1638
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 413 PTPSHPQYEQYAGPQYGAPQHGYDPYYGH 499
P+P P Q GP G P G+ YGH
Sbjct: 29 PSPHSPYPHQQPGPLQGPPPPGHPGAYGH 57
>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
isoform B protein.
Length = 2133
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +2
Query: 404 HYQPTPS---HPQYEQYAGPQYGAPQHGYDPYYGH 499
H+QP PS HP + + P + P H P + H
Sbjct: 12 HHQPHPSMQHHPTHPHHQQPHHQQPHHPQQPIHQH 46
>AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB,
isoform B protein.
Length = 1638
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 413 PTPSHPQYEQYAGPQYGAPQHGYDPYYGH 499
P+P P Q GP G P G+ YGH
Sbjct: 29 PSPHSPYPHQQPGPLQGPPPPGHPGAYGH 57
>AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA,
isoform A protein.
Length = 1638
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 413 PTPSHPQYEQYAGPQYGAPQHGYDPYYGH 499
P+P P Q GP G P G+ YGH
Sbjct: 29 PSPHSPYPHQQPGPLQGPPPPGHPGAYGH 57
>AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD,
isoform D protein.
Length = 1634
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 413 PTPSHPQYEQYAGPQYGAPQHGYDPYYGH 499
P+P P Q GP G P G+ YGH
Sbjct: 29 PSPHSPYPHQQPGPLQGPPPPGHPGAYGH 57
>AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC,
isoform C protein.
Length = 1634
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 413 PTPSHPQYEQYAGPQYGAPQHGYDPYYGH 499
P+P P Q GP G P G+ YGH
Sbjct: 29 PSPHSPYPHQQPGPLQGPPPPGHPGAYGH 57
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,854,847
Number of Sequences: 53049
Number of extensions: 517102
Number of successful extensions: 1955
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1955
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -