Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a02
         (629 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CD1A9 Cluster: hypothetical protein TTHERM_0012...    33   5.7  
UniRef50_O02331 Cluster: Putative uncharacterized protein; n=1; ...    33   5.7  
UniRef50_O43149 Cluster: Zinc finger ZZ-type and EF-hand domain-...    33   5.7  
UniRef50_UPI00015C51A6 Cluster: hypothetical protein CKO_00012; ...    33   7.5  
UniRef50_A7IAD5 Cluster: NAD(P)H dehydrogenase; n=1; Candidatus ...    33   7.5  
UniRef50_P76612 Cluster: Uncharacterized protein ypjB; n=4; Ente...    33   7.5  
UniRef50_Q2QP84 Cluster: Vesicle tethering family protein, putat...    32   9.9  

>UniRef50_UPI00006CD1A9 Cluster: hypothetical protein TTHERM_00129240;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00129240 - Tetrahymena thermophila SB210
          Length = 2421

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +1

Query: 1    EYQSKRRARRTHEHEYVQIAVVKVSRAGSATI 96
            +YQ  RR  RTH+H+   +A+ ++S+AG  ++
Sbjct: 1923 QYQLARRGARTHDHKIKSLALYRLSQAGEQSL 1954


>UniRef50_O02331 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 464

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
 Frame = +1

Query: 355 GEPTLTESPVPVALARLQGRPGRYQRGLRNHRPSLQLAS--LQEAIDESPRRFSDETFIP 528
           GE T+  +     ++    R  R  R  RN  P +Q     +Q    +  R  + ET+ P
Sbjct: 105 GEATMNRTRANQQISESPNRR-RSTRQTRNPNPQMQFEGDRVQVRQGDEIRDITAETYFP 163

Query: 529 DTDDDEAYNDGPIEETPTR 585
           D DDD  Y     EE   R
Sbjct: 164 DDDDDSDYTQSDNEEEEER 182


>UniRef50_O43149 Cluster: Zinc finger ZZ-type and EF-hand
            domain-containing protein 1; n=23; Eumetazoa|Rep: Zinc
            finger ZZ-type and EF-hand domain-containing protein 1 -
            Homo sapiens (Human)
          Length = 2961

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 469  SLQEAIDESPRRFSDETFIPDTDDDEAYNDGPIEETPTRP 588
            S Q  I +SP   S  T +PD +D E  +  PIEE    P
Sbjct: 2036 SCQTQISDSPADASPPTGLPDAEDSEVSSQKPIEEKAVTP 2075


>UniRef50_UPI00015C51A6 Cluster: hypothetical protein CKO_00012;
           n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
           protein CKO_00012 - Citrobacter koseri ATCC BAA-895
          Length = 195

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +3

Query: 75  ARRFRYD----FVCRRLRLVIRFVRCASATAKGGRPPVRNSFGRF 197
           A+ FR+D    F+C ++R   RF RC    AK   PP R  + R+
Sbjct: 89  AQLFRHDNGKFFICTKMRRRSRFARCRRWPAKQKTPPERGFYQRY 133


>UniRef50_A7IAD5 Cluster: NAD(P)H dehydrogenase; n=1; Candidatus
           Methanoregula boonei 6A8|Rep: NAD(P)H dehydrogenase -
           Methanoregula boonei (strain 6A8)
          Length = 456

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -3

Query: 624 KSSVRRSASINDRSSRSLLNWAIVVRFIIVCVRYKRFV 511
           K SV  +A ++   S  L+ WA  + +++VC +YKRF+
Sbjct: 47  KDSVCFAAILDRIRSADLVLWAFPLYYLLVCAQYKRFI 84


>UniRef50_P76612 Cluster: Uncharacterized protein ypjB; n=4;
           Enterobacteriaceae|Rep: Uncharacterized protein ypjB -
           Escherichia coli (strain K12)
          Length = 263

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 505 FSDETFIPDTDDDEAYNDGPIEETP--TRPVVNGRRSS 612
           F D  F+ D  DD +  D P+E +P  T PVV+  +SS
Sbjct: 224 FDDILFMDDDFDDSSSEDDPVENSPVVTSPVVSSSKSS 261


>UniRef50_Q2QP84 Cluster: Vesicle tethering family protein,
           putative, expressed; n=3; Oryza sativa|Rep: Vesicle
           tethering family protein, putative, expressed - Oryza
           sativa subsp. japonica (Rice)
          Length = 929

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 454 SLQLASLQEAIDESPRRFSDETFIPDTDDDEAYND 558
           S +LA L E +D   +   D+T +PD DDDE  +D
Sbjct: 894 STRLAELGEDVDTLLQGIGDDTALPDDDDDEDEDD 928


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,465,350
Number of Sequences: 1657284
Number of extensions: 9930970
Number of successful extensions: 29128
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29106
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)