Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a02
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    26   0.30 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.52 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   4.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.5  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 610 KICVH*RQVESESPQLGHRCTLHHRLCQV*T 518
           KI V     +++S  LG  CTLHH L ++ T
Sbjct: 204 KITVKNFATKTQSAVLGKICTLHHHLSKLVT 234


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 589 QVESESPQLGHRCTLHHRLCQV 524
           + +++S  LG  CTLHH L ++
Sbjct: 843 ETKAQSVALGKICTLHHHLSKL 864



 Score = 24.6 bits (51), Expect = 0.69
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 583 ESESPQLGHRCTLHHRLCQV*T 518
           +++S  LG  CTLHH L ++ T
Sbjct: 569 KAQSVVLGRICTLHHHLSKLVT 590



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 188  WTFFVLFNYNELHFHLQII 244
            ++ F  F+ N+LHF LQII
Sbjct: 1414 FSMFERFHVNKLHFLLQII 1432



 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 589  QVESESPQLGHRCTLHHRLCQV 524
            +V  +S   G  C+LHH L ++
Sbjct: 1293 EVRKKSLDFGKLCSLHHHLSKL 1314


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 234 CKSYFRQF*YEGAVINMQTP*SEESDKTI 320
           C S+F Q+ Y+G  I+ + P + + +  +
Sbjct: 129 CLSFFSQWGYDGIDIDWEYPANADKENFV 157


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 182 LFWTFFVLFNYNELHF 229
           L+W   +L N+N+++F
Sbjct: 440 LYWVDEILANHNDVYF 455


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,067
Number of Sequences: 336
Number of extensions: 2410
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)