Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a02
         (629 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0652 - 21527768-21528328,21528980-21529738,21530151-215302...    32   0.33 
02_05_0092 + 25749070-25750638                                         31   1.00 
01_02_0052 - 10662985-10662993,10663932-10664453                       29   2.3  
08_01_0661 - 5708088-5708131,5708217-5710048,5710527-5710625,571...    29   4.0  
04_01_0218 - 2759211-2760146                                           28   7.0  

>12_02_0652 -
           21527768-21528328,21528980-21529738,21530151-21530216,
           21530550-21530598,21530717-21530817,21531469-21531540,
           21531630-21531746,21531870-21531959,21532224-21532319,
           21532429-21532482,21533210-21533290,21533382-21533581,
           21533677-21533804,21533943-21533995,21534312-21534374
          Length = 829

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 454 SLQLASLQEAIDESPRRFSDETFIPDTDDDEAYND 558
           S +LA L E +D   +   D+T +PD DDDE  +D
Sbjct: 794 STRLAELGEDVDTLLQGIGDDTALPDDDDDEDEDD 828


>02_05_0092 + 25749070-25750638
          Length = 522

 Score = 30.7 bits (66), Expect = 1.00
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 487 DESPRRFSDETFIPDTDDDEAYNDGPIEETPTRP 588
           D+    +SD  +  DTDDD+   D  IE+TP+ P
Sbjct: 178 DDDDDGYSDSDYGMDTDDDDDRYDECIEKTPSPP 211


>01_02_0052 - 10662985-10662993,10663932-10664453
          Length = 176

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +1

Query: 442 NHRPSLQLASLQEAIDES-PRRFSDETFI-PDTDDDEAYNDGPIEETPTRPVVNGRRSSD 615
           ++ P+   A+  EA     PR     + +    DD+ A+  GP E +PT     GR+ S 
Sbjct: 74  HYPPAAAAAAATEAYFRGGPRTAGSSSLVFGPADDESAFMVGPFESSPTPRSGGGRKRSR 133

Query: 616 AT 621
           AT
Sbjct: 134 AT 135


>08_01_0661 -
           5708088-5708131,5708217-5710048,5710527-5710625,
           5711015-5711508,5711579-5711632,5712597-5712683,
           5712684-5712776
          Length = 900

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 201 TKNVQKSCGQAGDLLSLLHWRNEQTE*LDE 112
           T  VQK C    DL  +  W+++Q   LDE
Sbjct: 334 TSRVQKKCSSLADLPIVKSWKDDQESSLDE 363


>04_01_0218 - 2759211-2760146
          Length = 311

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 355 GEPTLTESPVPVALARLQGRPGRYQRGLRNHRPSLQLASLQEAIDE 492
           G  ++ ESP+P    R +GR G   RG    RP+ + AS  +  DE
Sbjct: 41  GNNSVAESPIPNRGGRGRGRAGGRGRGRGRGRPN-EAASSNQMEDE 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,908,074
Number of Sequences: 37544
Number of extensions: 284673
Number of successful extensions: 878
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)