Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a02
         (629 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK001683-1|BAA91834.1|  738|Homo sapiens protein ( Homo sapiens ...    33   0.83 
AB007859-1|BAA23695.4| 2982|Homo sapiens KIAA0399 protein protein.     33   0.83 

>AK001683-1|BAA91834.1|  738|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10821 fis, clone NT2RP4001057. ).
          Length = 738

 Score = 33.1 bits (72), Expect = 0.83
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 469 SLQEAIDESPRRFSDETFIPDTDDDEAYNDGPIEETPTRP 588
           S Q  I +SP   S  T +PD +D E  +  PIEE    P
Sbjct: 350 SCQTQISDSPADASPPTGLPDAEDSEVSSQKPIEEKAVTP 389


>AB007859-1|BAA23695.4| 2982|Homo sapiens KIAA0399 protein protein.
          Length = 2982

 Score = 33.1 bits (72), Expect = 0.83
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 469  SLQEAIDESPRRFSDETFIPDTDDDEAYNDGPIEETPTRP 588
            S Q  I +SP   S  T +PD +D E  +  PIEE    P
Sbjct: 2057 SCQTQISDSPADASPPTGLPDAEDSEVSSQKPIEEKAVTP 2096


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,200,845
Number of Sequences: 237096
Number of extensions: 1463585
Number of successful extensions: 3240
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3236
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)