Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a02
         (629 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81131-1|CAB03423.4|  464|Caenorhabditis elegans Hypothetical pr...    33   0.17 
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr...    31   0.90 
Z12017-3|CAA78049.1|  570|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U61952-5|AAB03162.1|  135|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z81131-1|CAB03423.4|  464|Caenorhabditis elegans Hypothetical
           protein T24D1.2 protein.
          Length = 464

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
 Frame = +1

Query: 355 GEPTLTESPVPVALARLQGRPGRYQRGLRNHRPSLQLAS--LQEAIDESPRRFSDETFIP 528
           GE T+  +     ++    R  R  R  RN  P +Q     +Q    +  R  + ET+ P
Sbjct: 105 GEATMNRTRANQQISESPNRR-RSTRQTRNPNPQMQFEGDRVQVRQGDEIRDITAETYFP 163

Query: 529 DTDDDEAYNDGPIEETPTR 585
           D DDD  Y     EE   R
Sbjct: 164 DDDDDSDYTQSDNEEEEER 182


>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
           protein C06E1.10 protein.
          Length = 1148

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +1

Query: 457 LQLASLQEAIDESPRRFSDETFIPDTDDDEAYNDGPIEETPTRPVVNGRR 606
           + L  + EAID +P    D+  +   DD+E+ N+  I   PT  V+N ++
Sbjct: 172 IDLDDVDEAIDGNPETNLDQIVVKREDDEESDNE-DILALPTTTVINRKK 220


>Z12017-3|CAA78049.1|  570|Caenorhabditis elegans Hypothetical
           protein R08D7.3 protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 403 LQGRPGRYQRGLRNHRPSLQLASLQEAIDESPRRFSDETFIPDTDDDE 546
           ++ +PG+Y        P ++L SL E   ES R  SDE    ++DDD+
Sbjct: 526 MKQKPGKYLLMKDPQSPVIRLYSLPEGTFESERESSDE---ENSDDDQ 570


>U61952-5|AAB03162.1|  135|Caenorhabditis elegans Hypothetical
           protein F42A9.3 protein.
          Length = 135

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +3

Query: 9   VKAPRASHA*ARVCANRSSESLARRFRYDFVC 104
           VKAP+   A A+   NRSSE+L  +  +DF+C
Sbjct: 53  VKAPKIV-ADAQQGTNRSSETLENKMVHDFMC 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,713,288
Number of Sequences: 27780
Number of extensions: 248991
Number of successful extensions: 817
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)