Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p24
         (487 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93379-1|CAB07589.1|  218|Caenorhabditis elegans Hypothetical pr...    30   1.0  
AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione s...    30   1.0  
Z81479-4|CAB03939.1|  116|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z70682-7|CAA94585.2|  531|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AC024848-2|AAV34781.1|  245|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z93379-1|CAB07589.1|  218|Caenorhabditis elegans Hypothetical
           protein F21H7.1 protein.
          Length = 218

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 297 DETKQVHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMA 431
           +E KQ+HDK+ +   + ++ ++ ++ KE       GD + W ++ +A
Sbjct: 125 EEVKQIHDKVYIPAKNLMFKILTRILKENKSGFLVGDGLTWADLVVA 171


>AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione
           s-transferase protein34 protein.
          Length = 218

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 11/48 (22%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
 Frame = +3

Query: 294 EDETKQVHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMA 431
           E+E K++HD++ +   + ++ ++ ++ KE    +  GD + W ++ +A
Sbjct: 124 EEEVKRIHDEVYIPVKNLLFKILTRILKESKSEYLVGDGLTWADLVVA 171


>Z81479-4|CAB03939.1|  116|Caenorhabditis elegans Hypothetical
           protein C34F6.5 protein.
          Length = 116

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 4/26 (15%)
 Frame = +3

Query: 414 KNIEMASGPNSP----VQTEQDIEDI 479
           +N+E A+GP+ P    VQ EQD+E+I
Sbjct: 37  RNMEHAAGPSPPVEQGVQLEQDLEEI 62


>Z70682-7|CAA94585.2|  531|Caenorhabditis elegans Hypothetical
           protein F08G5.5 protein.
          Length = 531

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 388 ISTSFLSFIMTEYTGEWCF 332
           +S  F S+ MT Y G WC+
Sbjct: 94  VSRIFWSYEMTPYVGAWCY 112


>AC024848-2|AAV34781.1|  245|Caenorhabditis elegans Hypothetical
           protein Y67D8A.2c protein.
          Length = 245

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 30  IYALLCLTLVQSISCSIFMTKQHSQDDIIQHPLDYVE 140
           + AL  LTLVQ IS    +   H + + IQ+ + Y+E
Sbjct: 177 LVALYLLTLVQMISAGCKVIYTHHEVNFIQNLVFYIE 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,666,474
Number of Sequences: 27780
Number of extensions: 133143
Number of successful extensions: 383
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)