Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p23
         (556 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19710.2 68417.m02895 bifunctional aspartate kinase/homoserin...    27   6.4  
At4g19710.1 68417.m02894 bifunctional aspartate kinase/homoserin...    27   6.4  

>At4g19710.2 68417.m02895 bifunctional aspartate kinase/homoserine
          dehydrogenase, putative / AK-HSDH, putative similar to
          gb|X71364 [PIR|S46497] aspartate kinase / homoserine
          dehydrogenase from Arabidopsis thaliana
          Length = 916

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 10 VATLSPSFVTMPPKKQPEKSGS 75
          +ATL PSF   PP   P + GS
Sbjct: 1  MATLKPSFTVSPPNSNPIRFGS 22


>At4g19710.1 68417.m02894 bifunctional aspartate kinase/homoserine
          dehydrogenase, putative / AK-HSDH, putative similar to
          gb|X71364 [PIR|S46497] aspartate kinase / homoserine
          dehydrogenase from Arabidopsis thaliana
          Length = 859

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 10 VATLSPSFVTMPPKKQPEKSGS 75
          +ATL PSF   PP   P + GS
Sbjct: 1  MATLKPSFTVSPPNSNPIRFGS 22


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.303    0.122    0.341 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,047,043
Number of Sequences: 28952
Number of extensions: 38541
Number of successful extensions: 79
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)