SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p22
         (647 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17392-1|CAA76759.1|  122|Homo sapiens prefoldin subunit 1 protein.    87   7e-17
AK223394-1|BAD97114.1|  122|Homo sapiens prefoldin 1 variant pro...    87   7e-17
BC011869-1|AAH11869.1|  122|Homo sapiens prefoldin subunit 1 pro...    86   9e-17
BC006202-1|AAH06202.1|  122|Homo sapiens prefoldin subunit 1 pro...    86   9e-17
BC003620-1|AAH03620.1|  122|Homo sapiens prefoldin subunit 1 pro...    86   9e-17
BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and pol...    33   1.2  
BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and pol...    33   1.2  
AF046935-1|AAC03107.1|  725|Homo sapiens PCF11p homolog protein.       33   1.2  
AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein.     33   1.2  
BX571742-1|CAE11868.1|  902|Homo sapiens hypothetical protein pr...    32   1.5  
BC040956-1|AAH40956.1|  699|Homo sapiens zinc finger CCCH-type, ...    32   1.5  
BC033105-1|AAH33105.1|  699|Homo sapiens zinc finger CCCH-type, ...    32   1.5  
BC025308-1|AAH25308.1|  699|Homo sapiens zinc finger CCCH-type, ...    32   1.5  
BC002935-1|AAH02935.1|  447|Homo sapiens ZC3HAV1 protein protein.      32   1.5  
Z38133-1|CAA86293.1| 1937|Homo sapiens Myosin protein.                 31   4.7  
BC041070-1|AAH41070.1|  436|Homo sapiens keratin 34 protein.           30   6.2  
Y16788-1|CAA76384.1|  404|Homo sapiens type I hair keratin 3A pr...    30   8.2  
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.                30   8.2  
X51592-1|CAA35941.1| 1437|Homo sapiens fetal-myosin heavy chain ...    30   8.2  
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot...    30   8.2  
BC069135-1|AAH69135.1|  404|Homo sapiens keratin 33A protein.          30   8.2  
BC057227-1|AAH57227.1|  318|Homo sapiens Unknown (protein for IM...    30   8.2  
AJ633621-1|CAG17613.2|  404|Homo sapiens keratin hHa3-I protein.       30   8.2  

>Y17392-1|CAA76759.1|  122|Homo sapiens prefoldin subunit 1 protein.
          Length = 122

 Score = 86.6 bits (205), Expect = 7e-17
 Identities = 45/120 (37%), Positives = 67/120 (55%)
 Frame = +3

Query: 99  MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 278
           MA  VDLELK+AF +LQ  +I+T++ ++  D Q+  L R + H +LT  EI  L   T  
Sbjct: 1   MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60

Query: 279 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 458
           YE + RMF+    E I   L +K      +I +L  +K  L   L E+E NIR+++  +R
Sbjct: 61  YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERRLKEAEDNIREMLMARR 120


>AK223394-1|BAD97114.1|  122|Homo sapiens prefoldin 1 variant
           protein.
          Length = 122

 Score = 86.6 bits (205), Expect = 7e-17
 Identities = 44/120 (36%), Positives = 68/120 (56%)
 Frame = +3

Query: 99  MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 278
           MA  VDLELK+AF +LQ  +I+T++ ++  D Q+  L R + H +LT  EI  L   T  
Sbjct: 1   MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60

Query: 279 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 458
           YE + RMF+    E I   L +K      +I +L  +K  L  ++ E+E NIR+++  +R
Sbjct: 61  YEGVGRMFILQSKEAIHSQLLEKQKVAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120


>BC011869-1|AAH11869.1|  122|Homo sapiens prefoldin subunit 1
           protein.
          Length = 122

 Score = 86.2 bits (204), Expect = 9e-17
 Identities = 44/120 (36%), Positives = 68/120 (56%)
 Frame = +3

Query: 99  MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 278
           MA  VDLELK+AF +LQ  +I+T++ ++  D Q+  L R + H +LT  EI  L   T  
Sbjct: 1   MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60

Query: 279 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 458
           YE + RMF+    E I   L +K      +I +L  +K  L  ++ E+E NIR+++  +R
Sbjct: 61  YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120


>BC006202-1|AAH06202.1|  122|Homo sapiens prefoldin subunit 1
           protein.
          Length = 122

 Score = 86.2 bits (204), Expect = 9e-17
 Identities = 44/120 (36%), Positives = 68/120 (56%)
 Frame = +3

Query: 99  MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 278
           MA  VDLELK+AF +LQ  +I+T++ ++  D Q+  L R + H +LT  EI  L   T  
Sbjct: 1   MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60

Query: 279 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 458
           YE + RMF+    E I   L +K      +I +L  +K  L  ++ E+E NIR+++  +R
Sbjct: 61  YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120


>BC003620-1|AAH03620.1|  122|Homo sapiens prefoldin subunit 1
           protein.
          Length = 122

 Score = 86.2 bits (204), Expect = 9e-17
 Identities = 44/120 (36%), Positives = 68/120 (56%)
 Frame = +3

Query: 99  MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 278
           MA  VDLELK+AF +LQ  +I+T++ ++  D Q+  L R + H +LT  EI  L   T  
Sbjct: 1   MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60

Query: 279 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 458
           YE + RMF+    E I   L +K      +I +L  +K  L  ++ E+E NIR+++  +R
Sbjct: 61  YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120


>BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and
           polyadenylation factor subunit, homolog (S. cerevisiae)
           protein.
          Length = 1555

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 25/109 (22%), Positives = 52/109 (47%)
 Frame = +3

Query: 162 ETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLR 341
           +T KTI +     +   + +    +T++E+D L   +K+ +S +   +++ L H K    
Sbjct: 328 KTSKTIPSEKLNSSKQEKSKSGEKITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKN 386

Query: 342 QKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAE 488
           Q++ ++  R+ D+N R   L   L +      D +++KR   E +   E
Sbjct: 387 QESESM--RLSDMNKRDPRLKKHLQDKTDGKDDDVKEKRKTAEKKDKDE 433


>BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and
           polyadenylation factor subunit, homolog (S. cerevisiae)
           protein.
          Length = 1555

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 25/109 (22%), Positives = 52/109 (47%)
 Frame = +3

Query: 162 ETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLR 341
           +T KTI +     +   + +    +T++E+D L   +K+ +S +   +++ L H K    
Sbjct: 328 KTSKTIPSEKLNSSKQEKSKSGEKITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKN 386

Query: 342 QKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAE 488
           Q++ ++  R+ D+N R   L   L +      D +++KR   E +   E
Sbjct: 387 QESESM--RLSDMNKRDPRLKKHLQDKTDGKDDDVKEKRKTAEKKDKDE 433


>AF046935-1|AAC03107.1|  725|Homo sapiens PCF11p homolog protein.
          Length = 725

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 25/109 (22%), Positives = 52/109 (47%)
 Frame = +3

Query: 162 ETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLR 341
           +T KTI +     +   + +    +T++E+D L   +K+ +S +   +++ L H K    
Sbjct: 328 KTSKTIPSEKLNSSKQEKSKSGEKITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKN 386

Query: 342 QKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAE 488
           Q++ ++  R+ D+N R   L   L +      D +++KR   E +   E
Sbjct: 387 QESESM--RLSDMNKRDPRLKKHLQDKTDGKDDDVKEKRKTAEKKDKDE 433


>AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein.
          Length = 1644

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 25/109 (22%), Positives = 52/109 (47%)
 Frame = +3

Query: 162 ETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLR 341
           +T KTI +     +   + +    +T++E+D L   +K+ +S +   +++ L H K    
Sbjct: 417 KTSKTIPSEKLNSSKQEKSKSGEKITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKN 475

Query: 342 QKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAE 488
           Q++ ++  R+ D+N R   L   L +      D +++KR   E +   E
Sbjct: 476 QESESM--RLSDMNKRDPRLKKHLQDKTDGKDDDVKEKRKTAEKKDKDE 522


>BX571742-1|CAE11868.1|  902|Homo sapiens hypothetical protein
           protein.
          Length = 902

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 225 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 398
           H  ++   I    P ++  ++  R+   +D  +  +  +L   T+T  SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513

Query: 399 LNH 407
           L+H
Sbjct: 514 LDH 516


>BC040956-1|AAH40956.1|  699|Homo sapiens zinc finger CCCH-type,
           antiviral 1 protein.
          Length = 699

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 225 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 398
           H  ++   I    P ++  ++  R+   +D  +  +  +L   T+T  SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513

Query: 399 LNH 407
           L+H
Sbjct: 514 LDH 516


>BC033105-1|AAH33105.1|  699|Homo sapiens zinc finger CCCH-type,
           antiviral 1 protein.
          Length = 699

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 225 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 398
           H  ++   I    P ++  ++  R+   +D  +  +  +L   T+T  SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513

Query: 399 LNH 407
           L+H
Sbjct: 514 LDH 516


>BC025308-1|AAH25308.1|  699|Homo sapiens zinc finger CCCH-type,
           antiviral 1 protein.
          Length = 699

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 225 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 398
           H  ++   I    P ++  ++  R+   +D  +  +  +L   T+T  SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513

Query: 399 LNH 407
           L+H
Sbjct: 514 LDH 516


>BC002935-1|AAH02935.1|  447|Homo sapiens ZC3HAV1 protein protein.
          Length = 447

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 225 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 398
           H  ++   I    P ++  ++  R+   +D  +  +  +L   T+T  SR+DD ++ ++C
Sbjct: 154 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 213

Query: 399 LNH 407
           L+H
Sbjct: 214 LDH 216


>Z38133-1|CAA86293.1| 1937|Homo sapiens Myosin protein.
          Length = 1937

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
 Frame = +3

Query: 213  RMQMHTNLTQREIDVLPPGTKTYESMARMFVQSD-LEHIKQNLRQKTNTLISRIDDLNNR 389
            R  +     Q E  V     K  +SMA +  Q D L+ +KQ L ++ + L    DDL++ 
Sbjct: 1178 RRDLEEATLQHEAMVAALRKKHADSMAELGEQIDNLQRVKQKLEKEKSELKMETDDLSSN 1237

Query: 390  KVCLNHTLNESES---NIRDLIQQKRMKNENQ 476
               ++      E    ++ D + + + K E Q
Sbjct: 1238 AEAISKAKGNLEKMCRSLEDQVSELKTKEEEQ 1269


>BC041070-1|AAH41070.1|  436|Homo sapiens keratin 34 protein.
          Length = 436

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
 Frame = +3

Query: 231 NLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRK------ 392
           N  +R +D L       ES     ++ +L  +K+N  ++ NTL S++ D  N +      
Sbjct: 202 NSIRRILDELTLCKSDLESQVES-LREELICLKKNHEEEVNTLRSQLGDRLNVEVDTAPT 260

Query: 393 VCLNHTLNESESNIRDLIQQKRMKNENQPAAES 491
           V LN  LNE+ S    L++  R + E   A ++
Sbjct: 261 VDLNQVLNETRSQYEALVETNRREVEQWFATQT 293


>Y16788-1|CAA76384.1|  404|Homo sapiens type I hair keratin 3A
           protein.
          Length = 404

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
 Frame = +3

Query: 303 VQSDLEHIKQNLRQKTNTLISRIDDLNNRK------VCLNHTLNESESNIRDLIQQKRMK 464
           ++ +L  +KQN  Q+ NTL  ++ D  N +      V LN  LNE+ S    L++  R +
Sbjct: 183 LKEELLCLKQNHEQEVNTLRCQLGDRLNVEVDAAPTVDLNQVLNETRSQYEALVETNRRE 242

Query: 465 NENQPAAES 491
            E   A ++
Sbjct: 243 VEQWFATQT 251


>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
          Length = 3259

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = +3

Query: 240  QREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNE 419
            Q +I  L    K  E   +   Q DLE  K+NL Q          +L + KV L+ T +E
Sbjct: 2032 QEKISALERTVKALE-FVQTESQKDLEITKENLAQAVEHRKKAQAELASFKVLLDDTQSE 2090

Query: 420  SESNIRDLIQQKRMKNENQPAAES 491
            +   + D ++ K+    N+ + +S
Sbjct: 2091 AARVLADNLKLKKELQSNKESVKS 2114


>X51592-1|CAA35941.1| 1437|Homo sapiens fetal-myosin heavy chain
           (1437 AA) protein.
          Length = 1437

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
 Frame = +3

Query: 213 RMQMHTNLTQREIDVLPPGTKTYESMARMFVQSD-LEHIKQNLRQKTNTLISRIDDLNNR 389
           R  +     Q E  V     K  +SMA +  Q D L+ +KQ L ++ + L    DDL++ 
Sbjct: 677 RRDLEEATLQHEAMVAALRKKHADSMAELGEQIDNLQRVKQKLEKEKSELKMETDDLSSN 736

Query: 390 KVCLNHTLNESES----NIRDLIQQKRMKNENQ 476
              ++      E     ++ D + + + K E Q
Sbjct: 737 AEAISKAKGNLEKDGGRSLEDQVSELKTKEEEQ 769


>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
          Length = 3225

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = +3

Query: 240  QREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNE 419
            Q +I  L    K  E   +   Q DLE  K+NL Q          +L + KV L+ T +E
Sbjct: 1998 QEKISALERTVKALE-FVQTESQKDLEITKENLAQAVEHRKKAQAELASFKVLLDDTQSE 2056

Query: 420  SESNIRDLIQQKRMKNENQPAAES 491
            +   + D ++ K+    N+ + +S
Sbjct: 2057 AARVLADNLKLKKELQSNKESVKS 2080


>BC069135-1|AAH69135.1|  404|Homo sapiens keratin 33A protein.
          Length = 404

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
 Frame = +3

Query: 303 VQSDLEHIKQNLRQKTNTLISRIDDLNNRK------VCLNHTLNESESNIRDLIQQKRMK 464
           ++ +L  +KQN  Q+ NTL  ++ D  N +      V LN  LNE+ S    L++  R +
Sbjct: 183 LKEELLCLKQNHEQEVNTLRCQLGDRLNVEVDAAPTVDLNQVLNETRSQYEALVETNRRE 242

Query: 465 NENQPAAES 491
            E   A ++
Sbjct: 243 VEQWFATQT 251


>BC057227-1|AAH57227.1|  318|Homo sapiens Unknown (protein for
           IMAGE:4702419) protein.
          Length = 318

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = +3

Query: 240 QREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNE 419
           Q +I  L    K  E   +   Q DLE  K+NL Q          +L + KV L+ T +E
Sbjct: 117 QEKISALERTVKALE-FVQTESQKDLEITKENLAQAVEHRKKAQAELASFKVLLDDTQSE 175

Query: 420 SESNIRDLIQQKRMKNENQPAAES 491
           +   + D ++ K+    N+ + +S
Sbjct: 176 AARVLADNLKLKKELQSNKESVKS 199


>AJ633621-1|CAG17613.2|  404|Homo sapiens keratin hHa3-I protein.
          Length = 404

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
 Frame = +3

Query: 303 VQSDLEHIKQNLRQKTNTLISRIDDLNNRK------VCLNHTLNESESNIRDLIQQKRMK 464
           ++ +L  +KQN  Q+ NTL  ++ D  N +      V LN  LNE+ S    L++  R +
Sbjct: 183 LKEELLCLKQNHEQEVNTLRCQLGDRLNVEVDAAPTVDLNQVLNETRSQYEALVETNRRE 242

Query: 465 NENQPAAES 491
            E   A ++
Sbjct: 243 VEQWFATQT 251


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,822,819
Number of Sequences: 237096
Number of extensions: 1338701
Number of successful extensions: 3395
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3395
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -