Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p20
(583 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4TC55 Cluster: Chromosome undetermined SCAF7053, whole... 226 3e-58
UniRef50_P31350 Cluster: Ribonucleoside-diphosphate reductase su... 225 6e-58
UniRef50_P36603 Cluster: Ribonucleoside-diphosphate reductase sm... 185 8e-46
UniRef50_A1A6K4 Cluster: At5g40942; n=1; Arabidopsis thaliana|Re... 169 5e-41
UniRef50_Q5K9L8 Cluster: Ribonucleotide reductase small subunit,... 159 6e-38
UniRef50_Q16J81 Cluster: Putative uncharacterized protein; n=1; ... 151 9e-36
UniRef50_Q7T6Y9 Cluster: Ribonucleoside-diphosphate reductase sm... 142 4e-33
UniRef50_Q5IJA4 Cluster: RR2 protein; n=4; Shrimp white spot syn... 139 5e-32
UniRef50_P49723 Cluster: Ribonucleoside-diphosphate reductase sm... 138 7e-32
UniRef50_A7TFJ9 Cluster: Putative uncharacterized protein; n=1; ... 129 5e-29
UniRef50_P42492 Cluster: Ribonucleoside-diphosphate reductase sm... 128 7e-29
UniRef50_A7TLQ4 Cluster: Putative uncharacterized protein; n=1; ... 116 3e-25
UniRef50_Q54E77 Cluster: Putative uncharacterized protein; n=1; ... 111 2e-23
UniRef50_A0EZ20 Cluster: Ribonucleotide reductase small subunit;... 110 2e-23
UniRef50_Q8QNF1 Cluster: EsV-1-128; n=2; Phaeovirus|Rep: EsV-1-1... 108 8e-23
UniRef50_Q9K3C2 Cluster: Ribonucleotide-diphosphate reductase sm... 87 3e-16
UniRef50_Q42088 Cluster: Ribonucleotide reductase small subunit;... 85 2e-15
UniRef50_Q6BBQ6 Cluster: Ribonucleotide reductase small subunit;... 83 4e-15
UniRef50_Q4TH71 Cluster: Chromosome undetermined SCAF3173, whole... 83 5e-15
UniRef50_A7AR36 Cluster: Ribonucleoside-diphosphate reductase be... 83 5e-15
UniRef50_UPI00015BCE4B Cluster: UPI00015BCE4B related cluster; n... 80 3e-14
UniRef50_Q5CFS5 Cluster: Ribonucleotide reductase small subunit;... 74 3e-12
UniRef50_Q4UJ43 Cluster: Ribonucleoside reductase, putative; n=2... 73 5e-12
UniRef50_Q6R7K3 Cluster: ORF20; n=1; Ostreid herpesvirus 1|Rep: ... 72 1e-11
UniRef50_Q5FPG6 Cluster: Ribonucleoside-diphosphate reductase be... 65 1e-09
UniRef50_A4IY38 Cluster: Biofunctional glutaredoxin 3 protein/Ri... 65 1e-09
UniRef50_A7CVZ4 Cluster: Ribonucleoside-diphosphate reductase; n... 60 4e-08
UniRef50_Q91FE8 Cluster: 376L; n=1; Invertebrate iridescent viru... 59 7e-08
UniRef50_A7C3B1 Cluster: Ribonucleotide-diphosphate reductase be... 59 7e-08
UniRef50_O83092 Cluster: Ribonucleoside-diphosphate reductase su... 59 9e-08
UniRef50_Q89YE6 Cluster: Ribonucleoside-diphosphate reductase be... 58 1e-07
UniRef50_Q0DD39 Cluster: Os06g0257500 protein; n=1; Oryza sativa... 57 3e-07
UniRef50_Q9HMU4 Cluster: Ribonucleoside reductase small chain; n... 57 3e-07
UniRef50_Q2S729 Cluster: Ribonucleotide reductase, beta subunit;... 56 5e-07
UniRef50_A0Q1D6 Cluster: Ribonucleoside-diphosphate reductase, b... 56 6e-07
UniRef50_A7K7Z4 Cluster: Putative uncharacterized protein z034R;... 56 8e-07
UniRef50_Q4YZT3 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q6A5Y4 Cluster: Ribonucleoside-diphosphate reductase be... 54 3e-06
UniRef50_A7IXG5 Cluster: Putative uncharacterized protein b640L;... 53 6e-06
UniRef50_P20561 Cluster: Uncharacterized 11.6 kDa protein; n=4; ... 52 1e-05
UniRef50_Q9Z6S4 Cluster: Ribonucleoside-diphosphate reductase su... 52 1e-05
UniRef50_Q9RZL6 Cluster: Ribonucleoside-diphosphate reductase, b... 51 2e-05
UniRef50_P74732 Cluster: Slr0591 protein; n=9; Bacteria|Rep: Slr... 50 4e-05
UniRef50_O67475 Cluster: Ribonucleoside-diphosphate reductase su... 49 9e-05
UniRef50_Q678G9 Cluster: Ribonucleotide reductase; n=2; Lymphocy... 48 1e-04
UniRef50_P37427 Cluster: Ribonucleoside-diphosphate reductase 1 ... 47 3e-04
UniRef50_Q88YQ5 Cluster: Ribonucleoside-diphosphate reductase, b... 46 7e-04
UniRef50_Q7DA78 Cluster: Ribonucleoside-diphosphate reductase, b... 46 9e-04
UniRef50_Q1VIC2 Cluster: Ribonucleotide-diphosphate reductase be... 46 9e-04
UniRef50_A4C9Q5 Cluster: Ribonucleotide-diphosphate reductase be... 45 0.001
UniRef50_Q8ELX7 Cluster: Ribonucleoside-diphosphate reductase be... 45 0.002
UniRef50_Q9Z5C7 Cluster: Ribonucleotide reductase minor subunit;... 44 0.002
UniRef50_Q8SCK7 Cluster: PHIKZ305; n=1; Pseudomonas phage phiKZ|... 44 0.002
UniRef50_Q01038 Cluster: Ribonucleoside-diphosphate reductase sm... 44 0.003
UniRef50_Q81TB4 Cluster: Ribonucleoside-diphosphate reductase, b... 44 0.003
UniRef50_Q8Y5B3 Cluster: Lmo2154 protein; n=26; Bacteria|Rep: Lm... 43 0.005
UniRef50_Q4J6V7 Cluster: Ribonucleoside-diphosphate reductase; n... 43 0.005
UniRef50_Q9KFH7 Cluster: Ribonucleoside-diphosphate reductase su... 43 0.006
UniRef50_Q5GQI6 Cluster: Ribonucleotide reductase B subunit; n=3... 42 0.008
UniRef50_Q4J6S8 Cluster: Ribonucleotide reductase, small chain; ... 41 0.025
UniRef50_A7K7Z8 Cluster: Putative uncharacterized protein z038R;... 40 0.043
UniRef50_P50621 Cluster: Ribonucleoside-diphosphate reductase su... 39 0.075
UniRef50_Q5HMW6 Cluster: Ribonucleoside-diphosphate reductase 2,... 39 0.099
UniRef50_Q6BK07 Cluster: Protein STU1; n=2; cellular organisms|R... 39 0.099
UniRef50_UPI00015B5EF5 Cluster: PREDICTED: similar to CG9246-PA;... 38 0.13
UniRef50_Q6QXF7 Cluster: ORF38; n=3; Baculoviridae|Rep: ORF38 - ... 38 0.13
UniRef50_P55983 Cluster: Ribonucleoside-diphosphate reductase su... 38 0.13
UniRef50_A6EC16 Cluster: Ribonucleotide-diphosphate; n=1; Pedoba... 38 0.23
UniRef50_Q4J6S5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_Q6KG86 Cluster: Putative ribonucleoside diphosphate red... 37 0.40
UniRef50_A4L226 Cluster: Ribonucleotide reductase small subunit;... 36 0.70
UniRef50_Q8I385 Cluster: Putative uncharacterized protein PFI031... 35 1.2
UniRef50_A5IYM2 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_P77402 Cluster: Uncharacterized HTH-type transcriptiona... 35 1.6
UniRef50_A5FCJ5 Cluster: Ribonucleotide reductase; n=1; Flavobac... 34 2.1
UniRef50_UPI000155436B Cluster: hypothetical protein ORF027; n=1... 34 2.8
UniRef50_Q1MP70 Cluster: Putative outer protein N; n=1; Lawsonia... 34 2.8
UniRef50_A6LGQ5 Cluster: Putative Fe-S oxidoreductase; n=1; Para... 34 2.8
UniRef50_A3J9D7 Cluster: TRNA-dihydrouridine synthase A; n=1; Ma... 33 3.7
UniRef50_Q5ZGC8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_Q95S88 Cluster: GM05661p; n=4; Sophophora|Rep: GM05661p... 33 3.7
UniRef50_Q8YTL8 Cluster: Sensor protein; n=2; Nostocaceae|Rep: S... 33 4.9
UniRef50_A3XHF9 Cluster: Ribonucleoside-diphosphate reductase, b... 33 4.9
UniRef50_O43272 Cluster: Proline oxidase, mitochondrial precurso... 33 4.9
UniRef50_Q6FF67 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_A7KUZ8 Cluster: Nrd beta subunit; n=1; Bacillus phage 0... 33 6.5
UniRef50_Q675T4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_UPI00006CFE60 Cluster: hypothetical protein TTHERM_0069... 32 8.6
UniRef50_UPI00006CFC4F Cluster: hypothetical protein TTHERM_0058... 32 8.6
UniRef50_A3I5A8 Cluster: Ribonucleotide-diphosphate; n=1; Bacill... 32 8.6
UniRef50_Q9C8J3 Cluster: Cinnamyl alcohol dehydrogenase, putativ... 32 8.6
UniRef50_A7RRW3 Cluster: Predicted protein; n=1; Nematostella ve... 32 8.6
UniRef50_A0D055 Cluster: Chromosome undetermined scaffold_33, wh... 32 8.6
UniRef50_A3LNL8 Cluster: Predicted protein; n=1; Pichia stipitis... 32 8.6
>UniRef50_Q4TC55 Cluster: Chromosome undetermined SCAF7053, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7053,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 369
Score = 226 bits (552), Expect = 3e-58
Identities = 103/116 (88%), Positives = 109/116 (93%)
Frame = +1
Query: 232 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIK 411
+EPLL+ENPRRFVIFPIQY D+WQMYKKAEASFWT EEVDLSKDL WE+LKD ER FI
Sbjct: 1 EEPLLKENPRRFVIFPIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFIS 60
Query: 412 HVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
HVLAFFAASDGIVNENLVERF+QEVQVTEARCFYGFQIAMEN+HSEMYSLLIDTYI
Sbjct: 61 HVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 116
>UniRef50_P31350 Cluster: Ribonucleoside-diphosphate reductase
subunit M2; n=260; root|Rep: Ribonucleoside-diphosphate
reductase subunit M2 - Homo sapiens (Human)
Length = 389
Score = 225 bits (550), Expect = 6e-58
Identities = 113/177 (63%), Positives = 132/177 (74%), Gaps = 7/177 (3%)
Frame = +1
Query: 70 MAPTVDKENLH----SGINGENRVQTKSPMKNS-VLATKNDNLTEEMDLDKNFEEFDP-- 228
+AP D + L G++ ++ T + + VLA+K + + + P
Sbjct: 8 LAPITDPQQLQLSPLKGLSLVDKENTPPALSGTRVLASKTARRIFQEPTEPKTKAAAPGV 67
Query: 229 QKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFI 408
+ EPLLRENPRRFVIFPI+Y DIWQMYKKAEASFWT EEVDLSKD+ WE+LK ER+FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 409 KHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
HVLAFFAASDGIVNENLVERFSQEVQ+TEARCFYGFQIAMEN+HSEMYSLLIDTYI
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
>UniRef50_P36603 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=12; Eukaryota|Rep: Ribonucleoside-diphosphate
reductase small chain - Schizosaccharomyces pombe
(Fission yeast)
Length = 391
Score = 185 bits (450), Expect = 8e-46
Identities = 88/128 (68%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
Frame = +1
Query: 199 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 378
L K +E D E +LR NP RFV+FPI+Y +IWQ YKKAEASFWT EE+DLSKDL DW+
Sbjct: 57 LGKKEDELD---EVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWD 113
Query: 379 T-LKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMY 555
L ER+FI VLA+FAASDGIVNENL+ERFS EVQ+ EARC YGFQI +EN+HSE Y
Sbjct: 114 NKLNADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETY 173
Query: 556 SLLIDTYI 579
SLL+DTYI
Sbjct: 174 SLLLDTYI 181
>UniRef50_A1A6K4 Cluster: At5g40942; n=1; Arabidopsis thaliana|Rep:
At5g40942 - Arabidopsis thaliana (Mouse-ear cress)
Length = 231
Score = 169 bits (410), Expect = 5e-41
Identities = 77/108 (71%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
Frame = +1
Query: 232 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFI 408
+EP+L P RF +FPIQYP IW+MYKKAEASFWT EEVDLS+D DWE +L + ERHFI
Sbjct: 6 EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFI 65
Query: 409 KHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEM 552
KHVLAFFAASDGIV ENL RF +VQ++EAR FYGFQIA+EN+HSE+
Sbjct: 66 KHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEI 113
>UniRef50_Q5K9L8 Cluster: Ribonucleotide reductase small subunit,
putative; n=1; Filobasidiella neoformans|Rep:
Ribonucleotide reductase small subunit, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 430
Score = 159 bits (385), Expect = 6e-38
Identities = 75/140 (53%), Positives = 99/140 (70%), Gaps = 1/140 (0%)
Frame = +1
Query: 163 ATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVE 342
+ K N +E + + F E ++E +LRE+ RFV+FPI+Y +IWQ YK A+ASFWT E
Sbjct: 78 SNKGGNPAKEGKVTRKFPE--EEEEDILRESESRFVLFPIKYNEIWQAYKHAQASFWTAE 135
Query: 343 EVDLSKDLSDW-ETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGF 519
E+D DL DW + + + ER FI +LAFFAASDGIV EN+V +F+ EVQ+ EAR FY F
Sbjct: 136 ELDFGHDLIDWHDRMTEQERFFILRILAFFAASDGIVGENIVSQFALEVQIAEARAFYSF 195
Query: 520 QIAMENVHSEMYSLLIDTYI 579
Q +E VHSE YSLLI+TY+
Sbjct: 196 QSMIEQVHSETYSLLIETYV 215
>UniRef50_Q16J81 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 244
Score = 151 bits (367), Expect = 9e-36
Identities = 69/81 (85%), Positives = 75/81 (92%)
Frame = +1
Query: 337 VEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYG 516
++EVDLSKDL+DWE LK E+HFI HVLAFF ASDG +NENLVERFSQE+QVTEARCFYG
Sbjct: 140 IKEVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYG 199
Query: 517 FQIAMENVHSEMYSLLIDTYI 579
FQIAMENVHSEMYSLLIDTYI
Sbjct: 200 FQIAMENVHSEMYSLLIDTYI 220
>UniRef50_Q7T6Y9 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Ribonucleoside-diphosphate reductase small chain -
Mimivirus
Length = 417
Score = 142 bits (345), Expect = 4e-33
Identities = 70/174 (40%), Positives = 101/174 (58%), Gaps = 11/174 (6%)
Frame = +1
Query: 91 ENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDK----------NFEEFDPQKEP 240
EN+ I+ + +K + + + N E +D + +FE KEP
Sbjct: 41 ENISESISEPTTINSKKKTSELIFSEETLNNVEIIDTEPYLSDYHKHAIDFENDVIMKEP 100
Query: 241 LLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHV 417
+L ++ + PI+Y +W YK ++WTVEEVDL+KD++DW L D +R+FI HV
Sbjct: 101 ILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFIMHV 160
Query: 418 LAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
LAFFAA+DGIVN N+ E V++ EA C YGFQ AMEN H EMYSL++ T++
Sbjct: 161 LAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFV 214
>UniRef50_Q5IJA4 Cluster: RR2 protein; n=4; Shrimp white spot
syndrome virus|Rep: RR2 protein - White spot syndrome
virus (WSSV)
Length = 328
Score = 139 bits (336), Expect = 5e-32
Identities = 62/121 (51%), Positives = 79/121 (65%)
Frame = +1
Query: 217 EFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSE 396
+ D K L RENP RFV PI + D+W+MYKK A FWT+EE+D +D DWE L E
Sbjct: 27 QVDTSKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDE 86
Query: 397 RHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTY 576
+ FI +LAFFA+SDGIV ENL R Q Q+ EAR F+ FQ+ ME++H +Y LID
Sbjct: 87 KDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRL 146
Query: 577 I 579
+
Sbjct: 147 V 147
>UniRef50_P49723 Cluster: Ribonucleoside-diphosphate reductase small
chain 2; n=3; Saccharomycetales|Rep:
Ribonucleoside-diphosphate reductase small chain 2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 345
Score = 138 bits (335), Expect = 7e-32
Identities = 59/114 (51%), Positives = 86/114 (75%)
Frame = +1
Query: 235 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 414
E LL EN RRFV+FPI+Y +IW YKK EASFWT EE++L+KD D++ L D ++ +I +
Sbjct: 25 EILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGN 84
Query: 415 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTY 576
+LA +SD +VN+ L+E FS ++Q E + FYGFQI MEN++SE+YS+++D +
Sbjct: 85 LLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAF 138
>UniRef50_A7TFJ9 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 351
Score = 129 bits (311), Expect = 5e-29
Identities = 60/118 (50%), Positives = 84/118 (71%), Gaps = 3/118 (2%)
Frame = +1
Query: 235 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDW---ETLKDSERHF 405
E +L EN RRFV+FPI+Y +I+ YKK EA FWT EE+D SKD+ +W + KD + +F
Sbjct: 26 ESILTENKRRFVLFPIKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDKITKDEKEYF 85
Query: 406 IKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
I+ +LA FA++D + ENL E S E Q EA+CFYGFQI ++N+H E+Y +LID+ +
Sbjct: 86 IR-LLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGILIDSLV 141
>UniRef50_P42492 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=2; African swine fever virus|Rep:
Ribonucleoside-diphosphate reductase small chain -
African swine fever virus (strain BA71V) (ASFV)
Length = 334
Score = 128 bits (310), Expect = 7e-29
Identities = 59/120 (49%), Positives = 76/120 (63%)
Frame = +1
Query: 220 FDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSER 399
F E LL EN +RF IFPIQ+P+ W YKK E+ WT +EVD+ KD+ DWE + +R
Sbjct: 4 FISNMEELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQR 63
Query: 400 HFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
F K +LAFF +D IV ENL+ F +E++V E FY Q A E VHSE YS+ + T I
Sbjct: 64 EFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLI 123
>UniRef50_A7TLQ4 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 361
Score = 116 bits (280), Expect = 3e-25
Identities = 57/136 (41%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
Frame = +1
Query: 175 DNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDL 354
D+ E+ + + E KEP+L EN RFV+ PI++ ++ YKK EA FW EE+D
Sbjct: 20 DSFLEKYKIHRLEVEESQSKEPILMENKSRFVLMPIKFHTVYDGYKKREALFWPAEEIDF 79
Query: 355 SKDLSDW-ETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAM 531
S D+ +W + D ++ IK LAF +S + + L E S EVQ+ EA+CFYGF+I +
Sbjct: 80 SHDIINWGKKASDHDKSIIKKSLAFLCSS-VLGSFYLPEHISSEVQIPEAKCFYGFEIMV 138
Query: 532 ENVHSEMYSLLIDTYI 579
EN+H E+YSL ID +
Sbjct: 139 ENIHGEVYSLAIDQLV 154
>UniRef50_Q54E77 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 257
Score = 111 bits (266), Expect = 2e-23
Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +1
Query: 292 DIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVLAFFAASDGIVNENLVE 468
DIW+MYKK A+ W VEE++ S D DWE L + ER F +VLAFF AS GI+N+NL
Sbjct: 86 DIWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNL-N 144
Query: 469 RFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
RF +VQ+ EA+CFY +QI ++ +HSE YSLLI+T I
Sbjct: 145 RFMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCI 181
>UniRef50_A0EZ20 Cluster: Ribonucleotide reductase small subunit;
n=1; Ecotropis obliqua NPV|Rep: Ribonucleotide reductase
small subunit - Ecotropis obliqua NPV
Length = 341
Score = 110 bits (265), Expect = 2e-23
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Frame = +1
Query: 262 RFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFIKHVLAFFAAS 438
R VI PI+ ++W+M K A W VEE DLS+D DW L ER F+KH+LAFFA++
Sbjct: 8 RKVILPIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASA 67
Query: 439 DGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
D IVN NL++ V EAR FY QI +ENVHSEMYSLL+ YI
Sbjct: 68 DTIVNINLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYI 114
>UniRef50_Q8QNF1 Cluster: EsV-1-128; n=2; Phaeovirus|Rep: EsV-1-128
- Ectocarpus siliculosus virus 1
Length = 419
Score = 108 bits (260), Expect = 8e-23
Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Frame = +1
Query: 262 RFVIF----PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFF 429
RF++F +Y D++Q+YKK A FW VEE+DLS D DWE E+HF+K VLAFF
Sbjct: 105 RFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLVLAFF 164
Query: 430 AASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTY 576
A+ D IV EN+ F E+ + + R + Q A E VH E YSLLI TY
Sbjct: 165 ASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTY 213
>UniRef50_Q9K3C2 Cluster: Ribonucleotide-diphosphate reductase small
chain; n=14; Bacteria|Rep: Ribonucleotide-diphosphate
reductase small chain - Streptomyces coelicolor
Length = 343
Score = 87.0 bits (206), Expect = 3e-16
Identities = 41/101 (40%), Positives = 59/101 (58%)
Frame = +1
Query: 277 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNE 456
P++YPD ++ Y+ A + W VEEVDL D++D L E+H I ++AFFA D IV
Sbjct: 25 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVAFFATGDSIVAN 84
Query: 457 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
NLV + + EAR + Q+ E VH + Y L+DTY+
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYL 125
>UniRef50_Q42088 Cluster: Ribonucleotide reductase small subunit;
n=1; Arabidopsis thaliana|Rep: Ribonucleotide reductase
small subunit - Arabidopsis thaliana (Mouse-ear cress)
Length = 83
Score = 84.6 bits (200), Expect = 2e-15
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = +1
Query: 232 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSE 396
+EPLL +RF +FPI+Y IW+MYKKAEASFWT EEVDLS D+ WE L DSE
Sbjct: 7 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSE 61
>UniRef50_Q6BBQ6 Cluster: Ribonucleotide reductase small subunit;
n=9; Plasmodium|Rep: Ribonucleotide reductase small
subunit - Plasmodium falciparum
Length = 324
Score = 83.4 bits (197), Expect = 4e-15
Identities = 40/115 (34%), Positives = 68/115 (59%)
Frame = +1
Query: 235 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 414
+ +L+EN R+V+FPI+Y W YK+ E+ FWT E+ + KD + L++ +++ +
Sbjct: 19 DEILKENKFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKDK---QYLENIDKNMLVK 75
Query: 415 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
L + I ++ L +Q+ E R FYGFQ+ MEN+H E+Y+ + +TYI
Sbjct: 76 DLHVYEEQALITSKML-----DIIQIPEGRAFYGFQMCMENIHDEVYACIFETYI 125
>UniRef50_Q4TH71 Cluster: Chromosome undetermined SCAF3173, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3173,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 441
Score = 83.0 bits (196), Expect = 5e-15
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +1
Query: 463 VERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
VERF+QEVQVTEARCFYGFQIAMEN+HSEMYSLLIDTYI
Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 272
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 234 GTSAAGEPAALCHLPYSIPRYMANVQES*SFVLDRRGSRF 353
G A GEPAAL HLP+ +P +A+VQE LDRRG R+
Sbjct: 107 GAPAEGEPAALRHLPHPVPGPLADVQEGGGVFLDRRGGRW 146
>UniRef50_A7AR36 Cluster: Ribonucleoside-diphosphate reductase beta
subunit, putative; n=1; Babesia bovis|Rep:
Ribonucleoside-diphosphate reductase beta subunit,
putative - Babesia bovis
Length = 329
Score = 83.0 bits (196), Expect = 5e-15
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Frame = +1
Query: 223 DPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERH 402
+ E LL+EN R+V+FPI Y +W MYK+ E SFW E+ + + + +L R
Sbjct: 17 EQHNETLLKENANRWVMFPIHYDALWAMYKEIENSFWAAEDFRFANERDTYSSLPTELRQ 76
Query: 403 FIKHVLAF---FAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLL 564
+ ++++ S+ + + Q+ EAR FYGFQ++ EN+HSE++ ++
Sbjct: 77 LVVKLISYHNRLDRSEVARPATITLDLLADTQIPEARAFYGFQVSYENIHSELFGIM 133
>UniRef50_UPI00015BCE4B Cluster: UPI00015BCE4B related cluster; n=1;
unknown|Rep: UPI00015BCE4B UniRef100 entry - unknown
Length = 319
Score = 80.2 bits (189), Expect = 3e-14
Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +1
Query: 280 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSD-WETLKDSERHFIKHVLAFFAASDGIVNE 456
+ YP+I +Y KA+ ++W EE DL+ D + +E L D ERH++ H + FF++++G V +
Sbjct: 28 VVYPEILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAEGWVGQ 87
Query: 457 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLID 570
N++E S+ ++ TE R F G+Q+ E H + + ++D
Sbjct: 88 NILE-ISKRIRNTETRMFLGYQLMEEMKHIDTFRYIMD 124
>UniRef50_Q5CFS5 Cluster: Ribonucleotide reductase small subunit;
n=2; Cryptosporidium|Rep: Ribonucleotide reductase small
subunit - Cryptosporidium hominis
Length = 369
Score = 73.7 bits (173), Expect = 3e-12
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Frame = +1
Query: 214 EEFDPQK-EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKD 390
E + QK E +L +NP R+V+FPI+Y +W +YKK E SFWT E + +D + + +
Sbjct: 7 ELLEQQKNESILLDNPFRWVLFPIKYSRLWSLYKKYEVSFWTAEVISPMEDKTKLMNMDE 66
Query: 391 SERHFIKHVLAFFAASDGIVNEN--LVERFSQEVQVTEARCFYGFQIAMENVHSEMY 555
+I+ V A D + L +VQV EAR ++ F + MEN++ E++
Sbjct: 67 RLLDYIEMVFAKRIYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENIYKELF 123
>UniRef50_Q4UJ43 Cluster: Ribonucleoside reductase, putative; n=2;
Theileria|Rep: Ribonucleoside reductase, putative -
Theileria annulata
Length = 332
Score = 72.9 bits (171), Expect = 5e-12
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +1
Query: 235 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 414
E LL+EN R+V+FPI++ W +YK+ E +FW E+ + D+ L + + +
Sbjct: 18 EILLKENHNRWVMFPIEHDTFWILYKEVENNFWAAEDFIFTDDIKLLYQLPKPIFNTLLN 77
Query: 415 VLAFFAASDGIV---NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTY 576
+L+F D + ++ EVQ+ EAR FYGFQ+ EN+H+E S + +
Sbjct: 78 LLSFHINLDNKLICRPVDITLDLLSEVQIAEARAFYGFQLTDENIHTETISSMFQLF 134
>UniRef50_Q6R7K3 Cluster: ORF20; n=1; Ostreid herpesvirus 1|Rep:
ORF20 - Ostreid herpesvirus 1
Length = 579
Score = 71.7 bits (168), Expect = 1e-11
Identities = 43/152 (28%), Positives = 72/152 (47%)
Frame = +1
Query: 124 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 303
R T +P + +L T D LTE D D K+ + + + ++ P Y +
Sbjct: 27 RKATLTPEQFEILNTSYDELTEFDDHPLYGGATDHHKDIVGKYD--HALLKPAVYQQLRD 84
Query: 304 MYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQE 483
K E+S W E+D D+ WE + ++ER ++ VLAFFA D +V + + F+ E
Sbjct: 85 FATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKDR-IAIFADE 143
Query: 484 VQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
+ E + F +Q E VH +Y+ +D +
Sbjct: 144 FPLPECKDFIDWQTVNEGVHQRVYNNYLDALV 175
>UniRef50_Q5FPG6 Cluster: Ribonucleoside-diphosphate reductase beta
chain; n=22; Alphaproteobacteria|Rep:
Ribonucleoside-diphosphate reductase beta chain -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 339
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +1
Query: 241 LLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFIKHV 417
L+ NP V P +YP + + + W EEV L+ D+ DW TL ++ERH + +
Sbjct: 18 LMTANP---VYKPFRYPWAYDAWLTQQRVHWLPEEVPLADDVKDWHRTLTEAERHLVTQI 74
Query: 418 LAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
FF SD VN ++ +SQ + TE +E +H YS L+DT
Sbjct: 75 FRFFTQSDVEVNSAYMKYYSQVFKPTEVLMMLSAFSNIETIHIAAYSHLLDT 126
>UniRef50_A4IY38 Cluster: Biofunctional glutaredoxin 3
protein/Ribonucleoside-diphosphate reductase beta
subunit; n=11; Francisella tularensis|Rep: Biofunctional
glutaredoxin 3 protein/Ribonucleoside-diphosphate
reductase beta subunit - Francisella tularensis subsp.
tularensis (strain WY96-3418)
Length = 410
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = +1
Query: 277 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDS--ERHFIKHVLAFFAASDGIV 450
P YP + K E + W +E+DLS+D++DW+ K + E+ +I ++L F SD V
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDVAV 161
Query: 451 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
+N ++F + E R G A E +H Y+LL DT
Sbjct: 162 GQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDT 202
>UniRef50_A7CVZ4 Cluster: Ribonucleoside-diphosphate reductase; n=1;
Opitutaceae bacterium TAV2|Rep:
Ribonucleoside-diphosphate reductase - Opitutaceae
bacterium TAV2
Length = 362
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Frame = +1
Query: 265 FVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE---TLKDSERHFIKHVLAFFAA 435
F + P++Y + +Y+ +A+ W E++ + KD+ W + D ER I+ + +F+A
Sbjct: 37 FNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERWIIRMGIGYFSA 96
Query: 436 SDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
++GIV +N+ + V E + G EN+H++ +I +
Sbjct: 97 AEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISS 142
>UniRef50_Q91FE8 Cluster: 376L; n=1; Invertebrate iridescent virus
6|Rep: 376L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 360
Score = 59.3 bits (137), Expect = 7e-08
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +1
Query: 277 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVLAFFAASDGIVN 453
P YP+ + + K E S W EV + D++DW+ L D++R F+ ++ FF D V
Sbjct: 12 PFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVDVA 71
Query: 454 ENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
++ ++ E G E VH + YS L++T
Sbjct: 72 SAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLET 111
>UniRef50_A7C3B1 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=1; Beggiatoa sp. PS|Rep:
Ribonucleotide-diphosphate reductase beta subunit -
Beggiatoa sp. PS
Length = 374
Score = 59.3 bits (137), Expect = 7e-08
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 277 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET--LKDSERHFIKHVLAFFAASDGIV 450
P++Y + + + A +FW E+ + +D W T L ++E K +++ ASD +V
Sbjct: 57 PVKYTSVRERFLNARKNFWIPNEIPMGEDKLQWNTGLLTEAEMWLFKSNISYLTASDNLV 116
Query: 451 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTY 576
+NL + + E R ++ QI E+ H E Y +++++
Sbjct: 117 PDNLDNAILKHITANEMRQYFRHQIMEESNHIESYLFILESF 158
>UniRef50_O83092 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=13; Bacteria|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Treponema pallidum
Length = 351
Score = 58.8 bits (136), Expect = 9e-08
Identities = 30/98 (30%), Positives = 49/98 (50%)
Frame = +1
Query: 280 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 459
++YP + + Y++A +FW EE+++S D+ D+ L E+ +L+F D I N
Sbjct: 41 MKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYRNLSAIEKTAYDKILSFLIFLDSIQTAN 100
Query: 460 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
L Q + E Q E VHS+ YS ++DT
Sbjct: 101 L-PNIGQYITANEINLCLTIQAFQEAVHSQSYSYMLDT 137
>UniRef50_Q89YE6 Cluster: Ribonucleoside-diphosphate reductase beta
subunit; n=29; Alphaproteobacteria|Rep:
Ribonucleoside-diphosphate reductase beta subunit -
Bradyrhizobium japonicum
Length = 360
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 283 QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET--LKDSERHFIKHVLAFFAASDGIVNE 456
+Y ++ +K+ + + W EEV L DL+DW + + DSER + + FF SD V +
Sbjct: 36 RYAWAYEFWKRQQQTHWMGEEVPLGADLNDWASGRVTDSERALLTQIFRFFTQSDIEVGD 95
Query: 457 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
N +R+ Q + ME VH + Y+LL+ T
Sbjct: 96 NYFKRYIPIFQPLTVQMMMAAFTNMETVHIDAYALLLKT 134
>UniRef50_Q0DD39 Cluster: Os06g0257500 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os06g0257500 protein -
Oryza sativa subsp. japonica (Rice)
Length = 352
Score = 56.8 bits (131), Expect = 3e-07
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -2
Query: 579 DVGIYKQGIHFRMNIFHGYLEAIETSCLSDLNFL*KSLNQVFIYNAI*SRKESKDMLDEM 400
DVG+ +Q +H R+++ G LE++E + L DL+ + +V ++A+ +E + + DE+
Sbjct: 189 DVGLEQQRVHLRVDVLDGDLESVEGARLGDLHVGHEPGGEVLEHDAVGGGEEGEHVGDEV 248
Query: 399 SLT-IF*GFPV**ILGQIDFLDGPKRSFSFLVHLPYIGVLNREDDKAPRVLPQQRFL 232
+L G PV + G++ L P+R LV LP + V +RE ++ L QQR L
Sbjct: 249 ALVGGQRGVPVARVGGEVHLLRRPERRHRLLVELPDLRVPDREHRESLGRLRQQRLL 305
>UniRef50_Q9HMU4 Cluster: Ribonucleoside reductase small chain; n=1;
Halobacterium salinarum|Rep: Ribonucleoside reductase
small chain - Halobacterium salinarium (Halobacterium
halobium)
Length = 331
Score = 56.8 bits (131), Expect = 3e-07
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = +1
Query: 271 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE--TLKDSERHFIKHVLAFFAASDG 444
I PI Y + Y++ A+ WT EEV + D+S W+ L D+ER ++ L FF+ ++
Sbjct: 15 ILPIDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAES 74
Query: 445 IVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
+ N+V + V E R + Q E VH++ + D+
Sbjct: 75 LTANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDS 117
>UniRef50_Q2S729 Cluster: Ribonucleotide reductase, beta subunit;
n=6; Proteobacteria|Rep: Ribonucleotide reductase, beta
subunit - Hahella chejuensis (strain KCTC 2396)
Length = 405
Score = 56.4 bits (130), Expect = 5e-07
Identities = 39/177 (22%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Frame = +1
Query: 70 MAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLR 249
+A + + S ++ ++ V T SP D+ + + + E PQK +
Sbjct: 19 LAVAIPAVSTSSAVSPQSPVST-SPAAAPAAGGAPDSAAKPAPVAEPVPEEVPQKLDPVN 77
Query: 250 ENPRRFV--------IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDW-ETLKDSERH 402
+ +R V + P +YP W+ + A + WT ++++S+D+ D+ L E+H
Sbjct: 78 PDDKRVVNGMTDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHKLTLEEKH 137
Query: 403 FIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
++VLA+ SD + N+ +++ E + + Q+ E++H+ Y I+T
Sbjct: 138 VYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIET 194
>UniRef50_A0Q1D6 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit; n=6; Clostridium|Rep:
Ribonucleoside-diphosphate reductase, beta subunit -
Clostridium novyi (strain NT)
Length = 342
Score = 56.0 bits (129), Expect = 6e-07
Identities = 27/98 (27%), Positives = 50/98 (51%)
Frame = +1
Query: 280 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 459
I+Y ++Y+ +FW EE+ L++D+ + L D ER+ +++F D + +EN
Sbjct: 32 IKYNWANELYRTMLNNFWIPEEISLNEDVKQFPYLTDGERNAFDKIISFLNFLDSVQSEN 91
Query: 460 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
L S+ + E Q E +H++ YS ++DT
Sbjct: 92 L-PNISRYITAPEVSSLLNVQTFQEEIHAQSYSYILDT 128
>UniRef50_A7K7Z4 Cluster: Putative uncharacterized protein z034R;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
z034R - Chlorella virus ATCV-1
Length = 410
Score = 55.6 bits (128), Expect = 8e-07
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = -2
Query: 570 IYKQGIHFRMNIFHGYLEAIETSCLSDLNFL*KSLNQVFIYNAI*SRKESKDMLDEMSLT 391
I +QG+ ++ L ++E +C +FL K + QV ++AI + KE++D+LDE++L
Sbjct: 210 IKEQGVLLAVDALIVPLVSVEHTCRGVRDFLGKVVVQVLHHHAIAACKEAEDVLDEVALI 269
Query: 390 IF*GF-PV**ILGQIDFLDGPKRSFSFLVHLPYIGVLNRE 274
I F PV IL ++D L GP+ LVHL +GV + E
Sbjct: 270 IVQFFTPVYHILVELDLLHGPESGNGLLVHLENVGVPDGE 309
>UniRef50_Q4YZT3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 65
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +1
Query: 202 DKNFEEFDPQKEP---LLRENPRRFVIFPIQYPDIWQMYKKAEASFWT 336
+K F +F KE +L + RF + PI YP++W YKKAEASFWT
Sbjct: 17 EKEFSDFQKTKESNEKILNKESNRFTLHPIIYPEVWNFYKKAEASFWT 64
>UniRef50_Q6A5Y4 Cluster: Ribonucleoside-diphosphate reductase beta
chain; n=6; Actinobacteria (class)|Rep:
Ribonucleoside-diphosphate reductase beta chain -
Propionibacterium acnes
Length = 328
Score = 53.6 bits (123), Expect = 3e-06
Identities = 24/100 (24%), Positives = 50/100 (50%)
Frame = +1
Query: 277 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNE 456
P+ Y + +Y +A A+ W E+ L +DL+D+ + E H + H++++F ++ +VN+
Sbjct: 15 PVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHLMSYFNPNELLVNK 74
Query: 457 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTY 576
L V E + Q+ E H + +++T+
Sbjct: 75 ALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETF 114
>UniRef50_A7IXG5 Cluster: Putative uncharacterized protein b640L;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
b640L - Paramecium bursaria Chlorella virus NY2A
(PBCV-NY2A)
Length = 139
Score = 52.8 bits (121), Expect = 6e-06
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = -2
Query: 543 MNIFHGYLEAIETSCLSDLNFL*KSLNQVFIYNAI*SRKESKDMLDEMSLTIF*GF-PV* 367
MN F L IE SCL +F K ++F ++ + + KE ++M DE+S + PV
Sbjct: 1 MNGFVECLICIELSCLWCHHFDTKVCLKIFHHDTVGACKEPQNMFDEVSFIVVQFLTPVC 60
Query: 366 *ILGQIDFLDGPKRSFSFLVHLPYIGVLNREDDKAPR-VLPQQRFLLWVELFEIFIEVHF 190
+ + +FL GPK LVH+P I +LN + + R V+ Q RFL ++ I+ +
Sbjct: 61 NVCVKRNFLGGPKGCHCLLVHVPQIMILNGKRRELTRSVVGQNRFLCCHSIYFIYNSTYK 120
Query: 189 LSQIVIFR 166
+++ I R
Sbjct: 121 YTRLSICR 128
>UniRef50_P20561 Cluster: Uncharacterized 11.6 kDa protein; n=4;
Orthopoxvirus|Rep: Uncharacterized 11.6 kDa protein -
Vaccinia virus (strain Copenhagen) (VACV)
Length = 96
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/56 (41%), Positives = 40/56 (71%)
Frame = -2
Query: 579 DVGIYKQGIHFRMNIFHGYLEAIETSCLSDLNFL*KSLNQVFIYNAI*SRKESKDM 412
++ I ++ IHFRMN+F+G+L+++ETS L +L F KS Q+FI+ ++ K+ + M
Sbjct: 32 NISIDQKTIHFRMNVFNGHLKSVETSSLGNLYFCTKSFRQIFIHYSVTGCKKRQYM 87
>UniRef50_Q9Z6S4 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=117; Bacteria|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Length = 346
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = +1
Query: 271 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET--LKDSERHFIKHVLAFFAASDG 444
+ PI+Y W+ Y A+ W EV +++D+ W++ L + ER I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAES 90
Query: 445 IVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
+V N+V + + EAR + Q E VH+ + + ++
Sbjct: 91 LVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLYICES 133
>UniRef50_Q9RZL6 Cluster: Ribonucleoside-diphosphate reductase, beta
chain; n=2; Deinococcus|Rep: Ribonucleoside-diphosphate
reductase, beta chain - Deinococcus radiodurans
Length = 354
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/91 (31%), Positives = 42/91 (46%)
Frame = +1
Query: 307 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 486
Y K + W EE+ L+ D W+TL D ER H A A D + E + R V
Sbjct: 44 YAKYTSQLWFPEEIPLTNDALAWKTLSDEERWTYIHASAGLNALDTLQGEVGMPRLRDLV 103
Query: 487 QVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
+ FQ ME++H+ YSL+ T++
Sbjct: 104 DGHIRKATLQFQGMMEDIHARSYSLMNKTFL 134
>UniRef50_P74732 Cluster: Slr0591 protein; n=9; Bacteria|Rep:
Slr0591 protein - Synechocystis sp. (strain PCC 6803)
Length = 355
Score = 50.0 bits (114), Expect = 4e-05
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +1
Query: 304 MYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQE 483
+Y++ +FW + +D+++D++D+ L + ER+ +L++ D + N +
Sbjct: 53 LYQQMRENFWIPQRLDITQDVTDYWNLTNEERYAFDGILSYLTFLDSVQTCN-IPHLKSS 111
Query: 484 VQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
V E QI+ E +H++ Y +I+T I
Sbjct: 112 VTAPEISLCMAEQISQEGMHNQSYQYMIETII 143
>UniRef50_O67475 Cluster: Ribonucleoside-diphosphate reductase
subunit beta (EC 1.17.4.1) (Ribonucleotide reductase
small subunit) [Contains: Aae nrdB intein (Aae RIR2
intein)]; n=1; Aquifex aeolicus|Rep:
Ribonucleoside-diphosphate reductase subunit beta (EC
1.17.4.1) (Ribonucleotide reductase small subunit)
[Contains: Aae nrdB intein (Aae RIR2 intein)] - Aquifex
aeolicus
Length = 696
Score = 48.8 bits (111), Expect = 9e-05
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Frame = +1
Query: 223 DPQKEPLLRENPRR-FVIFPIQYPDIWQMYK-KAEASFWTVEEVDLSKDLSDWET-LKDS 393
+ K +++ NP F + I+Y + +YK +FW EE+ + +D +ET L D
Sbjct: 22 EASKRKIIKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQYETVLSDY 81
Query: 394 ERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
E+ + VL+F A D ++++ F + + E Q E+VH+ Y ++++
Sbjct: 82 EKRAYELVLSFLIALDSF-QVDMLKEFGRMITAPEVEMAITAQEFQESVHAYSYQFILES 140
Query: 574 YI 579
+
Sbjct: 141 VV 142
>UniRef50_Q678G9 Cluster: Ribonucleotide reductase; n=2;
Lymphocystivirus|Rep: Ribonucleotide reductase -
Lymphocystis disease virus - isolate China
Length = 374
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 277 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE--TLKDSERHFIKHVLAFFAASDGIV 450
P YP ++ E WT +E+ L+ D++DW+ L D E+ FI +L F D V
Sbjct: 73 PFHYPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEKKFITQILRLFTQLDVSV 132
Query: 451 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
+ F + E R E H + Y+LL DT
Sbjct: 133 GQLYHNTFIPIFKNNEIRNMLCSFACREGTHQQAYALLNDT 173
>UniRef50_P37427 Cluster: Ribonucleoside-diphosphate reductase 1
subunit beta; n=171; root|Rep:
Ribonucleoside-diphosphate reductase 1 subunit beta -
Salmonella typhimurium
Length = 376
Score = 47.2 bits (107), Expect = 3e-04
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +1
Query: 223 DPQKEPLLRENPRRFVIFPIQYPDIWQ-MYKKAEASFWTVEEVDLSKDLSDWETLKDSER 399
D KEP+ P + Q DI++ + +K + FW EEVD+S+D D++ L + E+
Sbjct: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71
Query: 400 HFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLI 567
H L + D I + + + E + E +HS Y+ +I
Sbjct: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHII 127
>UniRef50_Q88YQ5 Cluster: Ribonucleoside-diphosphate reductase, beta
chain; n=6; Lactobacillales|Rep:
Ribonucleoside-diphosphate reductase, beta chain -
Lactobacillus plantarum
Length = 336
Score = 46.0 bits (104), Expect = 7e-04
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = +1
Query: 307 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 486
++K FW + +S D++DW L D R + HV D + +++ ++ + V
Sbjct: 34 WEKLTEQFWLDTRIPVSNDMADWRELDDDHRWVVGHVFGGLTLLDTLQSQDGLQALRRNV 93
Query: 487 QVTEARCFYGFQIAMENVHSEMYSLLIDT 573
+ ME+VH++ YS + +T
Sbjct: 94 LTSHETAVLNNIQFMESVHAKSYSTIFET 122
>UniRef50_Q7DA78 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit, putative; n=17; Actinomycetales|Rep:
Ribonucleoside-diphosphate reductase, beta subunit,
putative - Mycobacterium tuberculosis
Length = 314
Score = 45.6 bits (103), Expect = 9e-04
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 301 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFS- 477
+++ A FW ++D ++D +DWE L D ER + + F A + V E++ S
Sbjct: 22 KLFAGGNAKFWDPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSA 81
Query: 478 QEVQVTEARCFYGFQIAMENV-HSEMYSLLID 570
+ A Y Q A E H++++ + +D
Sbjct: 82 MRAEGRLADEMYLTQFAFEEAKHTQVFRMWLD 113
>UniRef50_Q1VIC2 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=1; Psychroflexus torquis ATCC 700755|Rep:
Ribonucleotide-diphosphate reductase beta subunit -
Psychroflexus torquis ATCC 700755
Length = 270
Score = 45.6 bits (103), Expect = 9e-04
Identities = 27/96 (28%), Positives = 42/96 (43%)
Frame = +1
Query: 280 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 459
++YP I ++ +K FW EEVD+SKD D+ L + E+H L D +
Sbjct: 30 VKYPQIEKITEKQLGFFWRPEEVDVSKDKKDFHELTEHEQHIFTSNLKRQILLDSVQGRA 89
Query: 460 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLI 567
F V + E + E +HS Y+ +I
Sbjct: 90 PNLAFLPHVSLPEVENWIETWSFFETIHSRSYTHII 125
>UniRef50_A4C9Q5 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=10; root|Rep: Ribonucleotide-diphosphate
reductase beta subunit - Pseudoalteromonas tunicata D2
Length = 376
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/95 (28%), Positives = 43/95 (45%)
Frame = +1
Query: 283 QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENL 462
++P ++ +K + FW EEVD+SKD D+E L D E+H L + D I +
Sbjct: 33 KHPIFEKLIEKQLSFFWRPEEVDVSKDRVDFENLPDHEKHIFLSNLKYQTLLDSIQGRSP 92
Query: 463 VERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLI 567
V + E + E +HS Y+ +I
Sbjct: 93 NVALLPIVSLPELETWIETWSFSETIHSRSYTHII 127
>UniRef50_Q8ELX7 Cluster: Ribonucleoside-diphosphate reductase beta
subunit; n=4; root|Rep: Ribonucleoside-diphosphate
reductase beta subunit - Oceanobacillus iheyensis
Length = 347
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 280 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 459
I YP ++MYK+ ++W +EV++S D+ + TL E+ ++ + D
Sbjct: 37 IAYPHWYKMYKRLVGNYWQADEVNMSSDVKQFSTLSKEEQDAYLKIIGLLSTLDAPQTRT 96
Query: 460 --LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
L+ ++ + V Q E VH+E YS ++ + +
Sbjct: 97 ALLISLYATDPSVQSIMAVIAQQ---EAVHNESYSYVLSSVV 135
>UniRef50_Q9Z5C7 Cluster: Ribonucleotide reductase minor subunit;
n=21; root|Rep: Ribonucleotide reductase minor subunit -
Staphylococcus aureus
Length = 323
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +1
Query: 292 DIWQMYKKAEAS-FWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVE 468
D+ M+ + S W E +SKD++ W+TL ++E+ K LA D ++ +
Sbjct: 11 DMTNMFWRQNISQMWVETEFKVSKDIASWKTLSEAEQDTFKKALAGLTGLDTHQADDGMP 70
Query: 469 RFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
+ Y F ME +H++ YS + T +
Sbjct: 71 LVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLL 107
>UniRef50_Q8SCK7 Cluster: PHIKZ305; n=1; Pseudomonas phage
phiKZ|Rep: PHIKZ305 - Pseudomonas phage phiKZ
Length = 387
Score = 44.4 bits (100), Expect = 0.002
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = +1
Query: 235 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 414
E +L ++P YP +W++YK+ + W E D S L ++ET S +
Sbjct: 23 EIILGDDPGLLDSIHTHYPKMWELYKRLKMLDWDELEFDFSTCLVEFETCDKSTYDMMIK 82
Query: 415 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMEN--VHSEMYSLLI 567
LA+ +D + + ++V S +T++R + G+ +N VH+ YS ++
Sbjct: 83 TLAWQWEADSVASRSIVNILSP--VMTDSRVWAGYVRINDNEDVHALTYSEIV 133
>UniRef50_Q01038 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=19; Herpesviridae|Rep:
Ribonucleoside-diphosphate reductase small chain -
Saimiriine herpesvirus 2 (strain 11) (SaHV-2)
(Herpesvirus saimiri)
Length = 305
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/90 (24%), Positives = 47/90 (52%)
Frame = +1
Query: 301 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQ 480
++ K+ + W +V L D+ + L + + F K + F ++ +VN N+ + SQ
Sbjct: 18 ELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINIEDLLSQ 77
Query: 481 EVQVTEARCFYGFQIAMENVHSEMYSLLID 570
+ +Y Q+AMEN+H ++Y+ +++
Sbjct: 78 -FDSHDISHYYAEQMAMENIHGKVYANILN 106
>UniRef50_Q81TB4 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit; n=17; Bacteria|Rep: Ribonucleoside-diphosphate
reductase, beta subunit - Bacillus anthracis
Length = 322
Score = 43.6 bits (98), Expect = 0.003
Identities = 26/89 (29%), Positives = 40/89 (44%)
Frame = +1
Query: 307 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 486
+K+ A FWT EE+ +S D + W L E+ K VL D + +
Sbjct: 18 WKQNIAQFWTEEEIAVSSDKNTWVQLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHL 77
Query: 487 QVTEARCFYGFQIAMENVHSEMYSLLIDT 573
+ +A+ F AME VH++ YS + T
Sbjct: 78 ENLQAKSVLAFMGAMEEVHAKSYSHIFTT 106
>UniRef50_Q8Y5B3 Cluster: Lmo2154 protein; n=26; Bacteria|Rep:
Lmo2154 protein - Listeria monocytogenes
Length = 349
Score = 43.2 bits (97), Expect = 0.005
Identities = 19/96 (19%), Positives = 40/96 (41%)
Frame = +1
Query: 280 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 459
I YP ++ YK+ ++W +EVD+ D + L + E++ ++ A D
Sbjct: 39 IPYPSFYRAYKELSTNYWIPDEVDMKSDAKQYPALSEQEKYAFDAIIGLLATLDS-PQTR 97
Query: 460 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLI 567
+ ++ + E +H+E YS ++
Sbjct: 98 FIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVL 133
>UniRef50_Q4J6V7 Cluster: Ribonucleoside-diphosphate reductase; n=3;
Sulfolobus|Rep: Ribonucleoside-diphosphate reductase -
Sulfolobus acidocaldarius
Length = 314
Score = 43.2 bits (97), Expect = 0.005
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +1
Query: 301 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQ 480
++Y+ + FW ++D SKD DW+ L E++++ ++++ F A + V ++ S
Sbjct: 33 KLYQIGKRLFWDPAKIDFSKDKEDWKKLSKDEKNYLLNIVSLFMAGEEAVAVDITPLIS- 91
Query: 481 EVQVTEAR---CFYGFQIAMENV-HSEMYSLLIDT 573
+ E R Y Q A E H+E + D+
Sbjct: 92 -TMINEGRVEDVIYLEQFAFEEAKHAEAFRRFCDS 125
>UniRef50_Q9KFH7 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=5; Bacillaceae|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Bacillus halodurans
Length = 345
Score = 42.7 bits (96), Expect = 0.006
Identities = 21/100 (21%), Positives = 49/100 (49%)
Frame = +1
Query: 280 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 459
+++ + +YK A+FWT E+++S D + TL ++E+ K ++ A D + +
Sbjct: 35 VRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKIIGLLAFLDSVQTDY 94
Query: 460 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
+ R ++ + + E VH++ YS ++ + +
Sbjct: 95 SM-RAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLV 133
>UniRef50_Q5GQI6 Cluster: Ribonucleotide reductase B subunit; n=3;
Myoviridae|Rep: Ribonucleotide reductase B subunit -
Cyanophage phage S-PM2
Length = 394
Score = 42.3 bits (95), Expect = 0.008
Identities = 24/95 (25%), Positives = 40/95 (42%)
Frame = +1
Query: 283 QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENL 462
+YP ++ ++ FW EEV L KD +D++ L+ ++H L + D +
Sbjct: 49 KYPVFDKLTQQQLGYFWRPEEVSLQKDRADYQQLRPEQKHIFTSNLKYQIMLDSVQGRGP 108
Query: 463 VERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLI 567
F + E ME VHS Y+ +I
Sbjct: 109 GMAFMPYCSLPELESAMNIWQTMEMVHSRSYTHII 143
>UniRef50_Q4J6S8 Cluster: Ribonucleotide reductase, small chain;
n=1; Sulfolobus acidocaldarius|Rep: Ribonucleotide
reductase, small chain - Sulfolobus acidocaldarius
Length = 330
Score = 40.7 bits (91), Expect = 0.025
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 301 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLV 465
++++ E WT E+D SKD DW+ LK S+R K + ++F A + V +++
Sbjct: 35 RLFEIGEKFRWTAYELDFSKDREDWKKLKPSDRTQNKIISSYFLAGEECVARDIL 89
>UniRef50_A7K7Z8 Cluster: Putative uncharacterized protein z038R;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein z038R - Chlorella virus ATCV-1
Length = 104
Score = 39.9 bits (89), Expect = 0.043
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -3
Query: 446 MPSEAAKKARTCLMKCLSLSFKV-XXXXXXXXXXXXXTVQNEASAFLYICHISGY*IG 276
MPS AKK R CLMK S SF TVQ A+AFLYI +SGY +G
Sbjct: 1 MPSLPAKKPRMCLMKWRSSSFSFSRQSTTSWLSWTSSTVQKVATAFLYIWKMSGYRMG 58
>UniRef50_P50621 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=14; root|Rep: Ribonucleoside-diphosphate
reductase subunit beta - Bacillus subtilis
Length = 329
Score = 39.1 bits (87), Expect = 0.075
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 292 DIWQM-YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVE 468
D QM Y + FW EE+ L+ DL W+ L +E+ VLA D +
Sbjct: 16 DFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLLDTEQGNTGMP 75
Query: 469 RFSQEVQVTEARCFYGFQIAMEN-VHSEMYSLLIDT 573
++ V + + F MEN VH++ YS + T
Sbjct: 76 IVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMT 111
>UniRef50_Q5HMW6 Cluster: Ribonucleoside-diphosphate reductase 2,
beta subunit; n=1; Staphylococcus epidermidis RP62A|Rep:
Ribonucleoside-diphosphate reductase 2, beta subunit -
Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Length = 340
Score = 38.7 bits (86), Expect = 0.099
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 307 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 486
+K+ WT EE SKDLS W+TL E+ L+ D + +
Sbjct: 23 WKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKALSGLTGLDTTQGTEGMPLLAFHY 82
Query: 487 QVTEARCFYGFQIAMENVHSEMYS 558
R + F MEN+H + YS
Sbjct: 83 PEEIWRGVFAFMSMMENIHHKSYS 106
>UniRef50_Q6BK07 Cluster: Protein STU1; n=2; cellular organisms|Rep:
Protein STU1 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 1529
Score = 38.7 bits (86), Expect = 0.099
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +1
Query: 67 TMAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLL 246
+++ K N GIN + ++Q MK++ N + M+ FE FD Q +P+L
Sbjct: 731 SVSSNAKKHNDSQGINADAQIQNIETMKSTYSVDDNSSNRTNMEQTNKFESFDKQSDPIL 790
Query: 247 R---ENPRRFV 270
+ N + F+
Sbjct: 791 KFLSSNQKEFI 801
>UniRef50_UPI00015B5EF5 Cluster: PREDICTED: similar to CG9246-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG9246-PA - Nasonia vitripennis
Length = 744
Score = 38.3 bits (85), Expect = 0.13
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +1
Query: 85 DKENLH-SGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPR 261
D EN+ S E Q K P++ + K+ TE N ++ DP+ L+EN +
Sbjct: 66 DFENMDLSDAEDEELEQEKQPVEAAKTLKKSKKKTEHKKALMNLQDTDPEFFKYLKENDK 125
Query: 262 RFVIFPI--QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 378
R + F I ++ + ++++ T++E+++ D SD+E
Sbjct: 126 RLLDFNIDDDGDNMSEADEESKVHVPTIDELEIGSDESDYE 166
>UniRef50_Q6QXF7 Cluster: ORF38; n=3; Baculoviridae|Rep: ORF38 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 369
Score = 38.3 bits (85), Expect = 0.13
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +1
Query: 271 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIV 450
I+P Y W Y+ +A++W+ E + +D+S + L + + H A A D V
Sbjct: 38 IWPPTYAPSWHYYQLHQANYWSATEHEPLEDVSGFIKLDSQWQKAVLHSFAILAIGDDAV 97
Query: 451 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLI 567
+ + E + + T+ + Q A E +H +Y+ ++
Sbjct: 98 MQFIDENDLEWEECTQ--WMFKDQGARETIHKIVYNKML 134
>UniRef50_P55983 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=27; Epsilonproteobacteria|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Helicobacter pylori (Campylobacter pylori)
Length = 341
Score = 38.3 bits (85), Expect = 0.13
Identities = 24/103 (23%), Positives = 45/103 (43%)
Frame = +1
Query: 265 FVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDG 444
F + I+Y ++K A+ W EEV ++ D D+ L E+ LA D
Sbjct: 31 FDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYLKLSAEEKIGYDRALAQLIFMDS 90
Query: 445 IVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
+ NL++ + + E Q E +HS Y++++++
Sbjct: 91 LQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVES 133
>UniRef50_A6EC16 Cluster: Ribonucleotide-diphosphate; n=1;
Pedobacter sp. BAL39|Rep: Ribonucleotide-diphosphate -
Pedobacter sp. BAL39
Length = 327
Score = 37.5 bits (83), Expect = 0.23
Identities = 18/82 (21%), Positives = 33/82 (40%)
Frame = +1
Query: 328 FWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARC 507
FW E SKD+ W++L + K L D + + + + + + +
Sbjct: 28 FWVDTEYIPSKDIDSWKSLSPEIQQVYKRALGGLTLLDTLQSHTGMPKLLDHIDGLQNKA 87
Query: 508 FYGFQIAMENVHSEMYSLLIDT 573
F ME +H++ YS + T
Sbjct: 88 VLSFMCMMEAIHAKSYSTIFTT 109
>UniRef50_Q4J6S5 Cluster: Putative uncharacterized protein; n=1;
Sulfolobus acidocaldarius|Rep: Putative uncharacterized
protein - Sulfolobus acidocaldarius
Length = 345
Score = 37.5 bits (83), Expect = 0.23
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +1
Query: 301 QMYKKAEASFWTVEEVD--LSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERF 474
+++ K+ FW+ + + +D DWET+ +SER +++ F+A + V+ L E
Sbjct: 33 RLWAKSNELFWSPLQFKELIQQDKQDWETMSESEREISEYIATAFSAGEEAVSRYLAELV 92
Query: 475 --SQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 573
E+ TE F E H++ + +D+
Sbjct: 93 IALDELGYTEEVLFLNQFQQEETRHTDAFRRWMDS 127
>UniRef50_Q6KG86 Cluster: Putative ribonucleoside diphosphate
reductase beta chain; n=2; Enterobacteria phage Felix
01|Rep: Putative ribonucleoside diphosphate reductase
beta chain - Enterobacteria phage Felix 01
Length = 377
Score = 36.7 bits (81), Expect = 0.40
Identities = 22/94 (23%), Positives = 46/94 (48%)
Frame = +1
Query: 286 YPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLV 465
YP I+++YK+ +A W+ +E + D+E++ S + +L + +D V ++L
Sbjct: 43 YPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSGVMLEILKWQWEADTQVAKSLA 102
Query: 466 ERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLI 567
F+ + Q +EN+H+ YS ++
Sbjct: 103 FAFAPFISDDIYATAIMKQSEIENLHALTYSEIV 136
>UniRef50_A4L226 Cluster: Ribonucleotide reductase small subunit;
n=1; Gryllus bimaculatus nudivirus|Rep: Ribonucleotide
reductase small subunit - Gryllus bimaculatus nudivirus
Length = 371
Score = 35.9 bits (79), Expect = 0.70
Identities = 24/91 (26%), Positives = 40/91 (43%)
Frame = +1
Query: 298 WQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFS 477
+ + K A W+ EE+ LSKD + + + + +L A D IV +NL + S
Sbjct: 72 YNFWLKQVALAWSPEEISLSKDKATFHRAPEQLKKISACMLGMLAIGDNIVLQNLSD-VS 130
Query: 478 QEVQVTEARCFYGFQIAMENVHSEMYSLLID 570
+ + Q +E HS+ YS +D
Sbjct: 131 EIITNNYVLNAISRQEDVEKTHSDFYSRSLD 161
>UniRef50_Q8I385 Cluster: Putative uncharacterized protein PFI0315c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0315c - Plasmodium falciparum
(isolate 3D7)
Length = 837
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 85 DKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLREN 255
D +N+H+ IN N + + N++ N+N ++ D N F P KE L++ N
Sbjct: 552 DNDNIHNSINNNNTINMNN--NNNINNINNNNNINSINRDINKNIFTPDKERLIKIN 606
>UniRef50_A5IYM2 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma agalactiae|Rep: Putative uncharacterized
protein - Mycoplasma agalactiae
Length = 222
Score = 34.7 bits (76), Expect = 1.6
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 70 MAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLR 249
+A ENL+SG ++ Q K+ KNS A K D+ +E +DK E P+K+ L
Sbjct: 21 VAAKCGNENLNSGKEDKSDSQNKTE-KNSG-ADKKDSTSENSTIDKKENESAPKKQ-LKN 77
Query: 250 ENPR 261
ENP+
Sbjct: 78 ENPK 81
>UniRef50_P77402 Cluster: Uncharacterized HTH-type transcriptional
regulator ydiP; n=17; Enterobacteriaceae|Rep:
Uncharacterized HTH-type transcriptional regulator ydiP
- Escherichia coli (strain K12)
Length = 303
Score = 34.7 bits (76), Expect = 1.6
Identities = 26/136 (19%), Positives = 54/136 (39%)
Frame = +1
Query: 91 ENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFV 270
EN + E K + +L N+N E++ L++ ++F + E + +
Sbjct: 163 ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYR 222
Query: 271 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIV 450
I PI Y + ++ + W++ +LS+ W ++ HF K L S
Sbjct: 223 ISPINYV----IQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278
Query: 451 NENLVERFSQEVQVTE 498
F+++ ++E
Sbjct: 279 RRQFKNCFAEQEILSE 294
>UniRef50_A5FCJ5 Cluster: Ribonucleotide reductase; n=1;
Flavobacterium johnsoniae UW101|Rep: Ribonucleotide
reductase - Flavobacterium johnsoniae UW101
Length = 324
Score = 34.3 bits (75), Expect = 2.1
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Frame = +1
Query: 277 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVLAFFAASDGIVN 453
P +YP++ Q + ++W EVD + D D+ L +E+ +K+ L A + V
Sbjct: 12 PFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHAHLSLAEKTAVKNSLLAIAQIEVAVK 71
Query: 454 E---NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLID 570
N+ E F + E E HSE YS L++
Sbjct: 72 SFWGNIYEHFPK----PEFNGLGSTFAECEFRHSEAYSRLLE 109
>UniRef50_UPI000155436B Cluster: hypothetical protein ORF027; n=1;
Pseudomonas phage PA11|Rep: hypothetical protein ORF027
- Pseudomonas phage PA11
Length = 322
Score = 33.9 bits (74), Expect = 2.8
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 274 FPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFIKHVLAFF 429
+ YP+ Q K + FWT +E+++ KD+ D + ++E H + L F
Sbjct: 11 YTFDYPEAIQFAKVQSSIFWTDDEINVEKDIQDIRVNMTEAEAHGVITTLRLF 63
>UniRef50_Q1MP70 Cluster: Putative outer protein N; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: Putative outer protein N
- Lawsonia intracellularis (strain PHE/MN1-00)
Length = 398
Score = 33.9 bits (74), Expect = 2.8
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +1
Query: 58 RQ*TMAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQ 231
+Q T A + KE H G GEN T M ++A KN+N +DK ++ DPQ
Sbjct: 273 KQCTTALSRWKEK-HKG-GGENSTLTPLEMMRELIALKNENFISPSSIDKIVDQADPQ 328
>UniRef50_A6LGQ5 Cluster: Putative Fe-S oxidoreductase; n=1;
Parabacteroides distasonis ATCC 8503|Rep: Putative Fe-S
oxidoreductase - Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC11152)
Length = 478
Score = 33.9 bits (74), Expect = 2.8
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 151 NSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLREN 255
NS+L + ++N ++D+DKN E+ QK+ LREN
Sbjct: 20 NSILLSPSENEYVDIDMDKNAYEYYKQKDFFLREN 54
>UniRef50_A3J9D7 Cluster: TRNA-dihydrouridine synthase A; n=1;
Marinobacter sp. ELB17|Rep: TRNA-dihydrouridine synthase
A - Marinobacter sp. ELB17
Length = 264
Score = 33.5 bits (73), Expect = 3.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 319 EASFWTVEEVDLSKDLSDWETLKDSERHFIK 411
E S WT++++ S DL DW+ + D R IK
Sbjct: 70 EFSGWTLDQISTSSDLLDWQLVVDQNRIMIK 100
>UniRef50_Q5ZGC8 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium phage 11b|Rep: Putative uncharacterized
protein - Flavobacterium phage 11b
Length = 154
Score = 33.5 bits (73), Expect = 3.7
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = +1
Query: 121 NRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIW 300
N++QTK +K A D T +++ KN E D EP+ +N F++ Y ++
Sbjct: 24 NKIQTKEVVKIDSTAKIVDKETIKIETKKNIENEDYYYEPI--DNKSEFIVDGKVYKNVH 81
Query: 301 QMYKKAEASFWTVEEVDLSKDLSDWETLKD 390
+KK + + + EV +D KD
Sbjct: 82 IKHKK-QKDYTNIAEVKTFDKKTDISVKKD 110
>UniRef50_Q95S88 Cluster: GM05661p; n=4; Sophophora|Rep: GM05661p -
Drosophila melanogaster (Fruit fly)
Length = 376
Score = 33.5 bits (73), Expect = 3.7
Identities = 23/95 (24%), Positives = 43/95 (45%)
Frame = +1
Query: 133 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 312
T+ P+ N +L+T + E+ L + + ++ +L + ++ FPI W+
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298
Query: 313 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 417
+ S E + L + L DW K RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329
>UniRef50_Q8YTL8 Cluster: Sensor protein; n=2; Nostocaceae|Rep:
Sensor protein - Anabaena sp. (strain PCC 7120)
Length = 920
Score = 33.1 bits (72), Expect = 4.9
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 271 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIV 450
+FP ++W+ KK++A WT EE++L+K++ + + V AF + V
Sbjct: 377 MFPRVSFNLWRDAKKSQAQEWTSEEIELAKEIGQHFASAIQQYELYQQVQAFNENLEKQV 436
Query: 451 NENLVE-RFSQEVQ 489
+ +E R + E Q
Sbjct: 437 QKRTLELRHTSEQQ 450
>UniRef50_A3XHF9 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit 1; n=9; cellular organisms|Rep:
Ribonucleoside-diphosphate reductase, beta subunit 1 -
Leeuwenhoekiella blandensis MED217
Length = 427
Score = 33.1 bits (72), Expect = 4.9
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 259 RRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVL 420
+R + P +YP++ + S+W E + + D+ D++T L + ER IK+ +
Sbjct: 109 KRINLKPYEYPELNEYVAAIRHSYWIHTEFNFTSDIQDFKTGLSEVERSAIKNTM 163
>UniRef50_O43272 Cluster: Proline oxidase, mitochondrial precursor;
n=33; Euteleostomi|Rep: Proline oxidase, mitochondrial
precursor - Homo sapiens (Human)
Length = 516
Score = 33.1 bits (72), Expect = 4.9
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +1
Query: 313 KAEASFW-TVEEVDLS--KDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQE 483
+AE W T E + +S DL DW +L DS KH++ A + + E L+ RF++E
Sbjct: 210 RAEIEDWFTAETLGVSGTMDLLDWSSLIDSRTKLSKHLVVPNAQTGQL--EPLLSRFTEE 267
Query: 484 VQVTEARCFYGFQIAMENVHSEMYSLLID 570
++ R + + L++D
Sbjct: 268 EELQMTRMLQRMDVLAKKATEMGVRLMVD 296
>UniRef50_Q6FF67 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter sp. ADP1|Rep: Putative uncharacterized
protein - Acinetobacter sp. (strain ADP1)
Length = 321
Score = 32.7 bits (71), Expect = 6.5
Identities = 10/24 (41%), Positives = 20/24 (83%)
Frame = +1
Query: 178 NLTEEMDLDKNFEEFDPQKEPLLR 249
N++++ ++++NFEEFD + EP L+
Sbjct: 179 NISQDYEINQNFEEFDAENEPFLK 202
>UniRef50_A7KUZ8 Cluster: Nrd beta subunit; n=1; Bacillus phage
0305phi8-36|Rep: Nrd beta subunit - Bacillus phage
0305phi8-36
Length = 352
Score = 32.7 bits (71), Expect = 6.5
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +1
Query: 292 DIW-QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVE 468
+IW + + EA+FW E+ + +D W++L E+ V A D + + ++E
Sbjct: 45 EIWYDISQTLEANFWRPVEIKMKEDEKMWDSLTPIEQDTFLRVGTALACLDSLQVKAILE 104
Query: 469 --RFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
RF+ + F Q E H+ YS + + +
Sbjct: 105 VIRFTTNSALANISAFIAQQ---EATHTTSYSYITSSLV 140
>UniRef50_Q675T4 Cluster: Putative uncharacterized protein; n=1;
Oikopleura dioica|Rep: Putative uncharacterized protein
- Oikopleura dioica (Tunicate)
Length = 843
Score = 32.7 bits (71), Expect = 6.5
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +1
Query: 79 TVDKENLHSGINGENRVQTKSPMKNSVLATKND----NLTEEMDLDKNFEEFDPQKEPLL 246
T+D+ ++ GI+ RV S NS+ D +++EE+ DK +F P LL
Sbjct: 460 TIDEHDV-DGISNHTRVNINSSNNNSITINVKDESGNSISEELKFDKEQSDFPPPPLQLL 518
Query: 247 RENPR 261
R R
Sbjct: 519 RPESR 523
>UniRef50_UPI00006CFE60 Cluster: hypothetical protein
TTHERM_00691460; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00691460 - Tetrahymena
thermophila SB210
Length = 518
Score = 32.3 bits (70), Expect = 8.6
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 82 VDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPL------ 243
++KE L + N + S ++N+ L+TK DNL+ ++ DK + Q PL
Sbjct: 384 LEKEYLIAYDIQNNTISQLSCLENNNLSTKIDNLSGKLFFDKKISQIMYQLGPLDIHGIM 443
Query: 244 LRENPRRFVIFPIQYPDIWQMYKK 315
+ E + F+ + Y IW K
Sbjct: 444 IDETMKLFISYHNSYVKIWNYQNK 467
>UniRef50_UPI00006CFC4F Cluster: hypothetical protein TTHERM_00584510;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00584510 - Tetrahymena thermophila SB210
Length = 1878
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 109 INGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFD 225
IN N V+ P+++ V KND + DLD NF++FD
Sbjct: 1216 INVNNNVKKPEPIQSKV---KNDKYDDFEDLDDNFDDFD 1251
>UniRef50_A3I5A8 Cluster: Ribonucleotide-diphosphate; n=1; Bacillus
sp. B14905|Rep: Ribonucleotide-diphosphate - Bacillus
sp. B14905
Length = 322
Score = 32.3 bits (70), Expect = 8.6
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +1
Query: 331 WTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGI---VNENLVERFSQEVQVTEA 501
W EE+ +SKD+ W++ + + + K V A D + + N V ++ ++Q
Sbjct: 31 WFPEEIAVSKDIKQWKSFEHQDTY--KKVFAGLTLLDTVQTNIGMNRVAAYTDDLQEKAV 88
Query: 502 RCFYGFQIAMENVHSEMYSLLIDT 573
+ A E +H++ YS + T
Sbjct: 89 LTVFD---AFEAIHAKSYSYIFTT 109
>UniRef50_Q9C8J3 Cluster: Cinnamyl alcohol dehydrogenase, putative;
82967-79323; n=6; core eudicotyledons|Rep: Cinnamyl
alcohol dehydrogenase, putative; 82967-79323 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 809
Score = 32.3 bits (70), Expect = 8.6
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 91 ENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFV 270
+NLHS + G R S K L + L EE+ + ++ +P+K L E+ +R +
Sbjct: 375 QNLHSSVEGWRRKALSSEAKLKNLQAEVCGLQEEIKRLRKEDKLEPEKNKLPSESEKRVL 434
Query: 271 I 273
I
Sbjct: 435 I 435
>UniRef50_A7RRW3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 634
Score = 32.3 bits (70), Expect = 8.6
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 163 ATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVE 342
A K ++ E+ L+ + + + + E L +E +R + Q D W +++ ++
Sbjct: 333 AKKRNDWLEQQRLEADSKRLEMEMEALAKEKVKRKEVHAKQV-DEWSRFEEE------LK 385
Query: 343 EVDLSKDLSDWETLKDSERH 402
+ D K L D E LKD ERH
Sbjct: 386 QRDAEKTLRDAEKLKDFERH 405
>UniRef50_A0D055 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 482
Score = 32.3 bits (70), Expect = 8.6
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 49 TVQRQ*TMAPTVDKENLHSGINGENRVQTKSPMKNSVLATKND-NLTEEMDLDKNFEEFD 225
TV ++ T +K+N G E +V+ KS KN+ + K D + +++ + +K+ ++ +
Sbjct: 138 TVAKEVTKPKPAEKKNEKEGSKSEKKVEEKSEKKNNDKSVKKDTDKSDKKEAEKSDKKVN 197
Query: 226 PQKEPLLRENPRR 264
+ E E P +
Sbjct: 198 DKSEKKPVEKPEK 210
>UniRef50_A3LNL8 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 574
Score = 32.3 bits (70), Expect = 8.6
Identities = 12/52 (23%), Positives = 29/52 (55%)
Frame = +1
Query: 307 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENL 462
YK+ EAS W + +D ++ WE L+ + +++K + +D ++++ +
Sbjct: 279 YKEKEASLWNADNMDEAEQEEKWEDLRKNRVNYLKTFTPIY-ENDPVIDKEI 329
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,057,590
Number of Sequences: 1657284
Number of extensions: 11165783
Number of successful extensions: 32053
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 30985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32005
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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