Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p20
         (583 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051936-1|AAK93360.1|  393|Drosophila melanogaster LD41588p pro...   242   2e-64
AE013599-1375|AAF58599.2|  393|Drosophila melanogaster CG8975-PA...   242   2e-64
U09370-1|AAA56996.1|  214|Drosophila melanogaster ribonucleoside...    85   9e-17
AY089653-1|AAL90391.1|  376|Drosophila melanogaster RH12051p pro...    33   0.21 
AY060911-1|AAL28459.1|  376|Drosophila melanogaster GM05661p pro...    33   0.21 
AE014296-2614|AAF49552.1|  376|Drosophila melanogaster CG5904-PA...    33   0.21 
BT022295-1|AAY54711.1|  222|Drosophila melanogaster IP08207p pro...    31   0.86 
AM086024-1|CAJ30424.1|  222|Drosophila melanogaster globin 2 pro...    31   0.86 
AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,...    28   8.0  
AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,...    28   8.0  

>AY051936-1|AAK93360.1|  393|Drosophila melanogaster LD41588p
           protein.
          Length = 393

 Score =  242 bits (593), Expect = 2e-64
 Identities = 111/127 (87%), Positives = 117/127 (92%)
 Frame = +1

Query: 199 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 378
           ++K+   FDP  EPLLRENPRRFVIFPIQY DIWQMYKKAEASFWTVEEVDLSKDL+DW 
Sbjct: 62  MEKSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 379 TLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYS 558
            LKD ERHFI HVLAFFAASDGIVNENLVERFSQEVQ+TEARCFYGFQIAMENVHSEMYS
Sbjct: 122 RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYS 181

Query: 559 LLIDTYI 579
           +LIDTYI
Sbjct: 182 VLIDTYI 188


>AE013599-1375|AAF58599.2|  393|Drosophila melanogaster CG8975-PA
           protein.
          Length = 393

 Score =  242 bits (593), Expect = 2e-64
 Identities = 111/127 (87%), Positives = 117/127 (92%)
 Frame = +1

Query: 199 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 378
           ++K+   FDP  EPLLRENPRRFVIFPIQY DIWQMYKKAEASFWTVEEVDLSKDL+DW 
Sbjct: 62  MEKSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 379 TLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYS 558
            LKD ERHFI HVLAFFAASDGIVNENLVERFSQEVQ+TEARCFYGFQIAMENVHSEMYS
Sbjct: 122 RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYS 181

Query: 559 LLIDTYI 579
           +LIDTYI
Sbjct: 182 VLIDTYI 188


>U09370-1|AAA56996.1|  214|Drosophila melanogaster
           ribonucleoside-diphosphate reductasesmall subunit
           protein.
          Length = 214

 Score = 84.6 bits (200), Expect = 9e-17
 Identities = 38/40 (95%), Positives = 40/40 (100%)
 Frame = +1

Query: 460 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 579
           LVERFSQEVQ+TEARCFYGFQIAMENVHSEMYS+LIDTYI
Sbjct: 1   LVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 40


>AY089653-1|AAL90391.1|  376|Drosophila melanogaster RH12051p
           protein.
          Length = 376

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 23/95 (24%), Positives = 43/95 (45%)
 Frame = +1

Query: 133 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 312
           T+ P+ N +L+T +     E+ L  +    +  ++ +L  + ++   FPI     W+   
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298

Query: 313 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 417
             + S    E + L + L DW   K   RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329


>AY060911-1|AAL28459.1|  376|Drosophila melanogaster GM05661p
           protein.
          Length = 376

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 23/95 (24%), Positives = 43/95 (45%)
 Frame = +1

Query: 133 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 312
           T+ P+ N +L+T +     E+ L  +    +  ++ +L  + ++   FPI     W+   
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298

Query: 313 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 417
             + S    E + L + L DW   K   RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329


>AE014296-2614|AAF49552.1|  376|Drosophila melanogaster CG5904-PA
           protein.
          Length = 376

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 23/95 (24%), Positives = 43/95 (45%)
 Frame = +1

Query: 133 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 312
           T+ P+ N +L+T +     E+ L  +    +  ++ +L  + ++   FPI     W+   
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298

Query: 313 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 417
             + S    E + L + L DW   K   RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329


>BT022295-1|AAY54711.1|  222|Drosophila melanogaster IP08207p
           protein.
          Length = 222

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 30/128 (23%), Positives = 55/128 (42%)
 Frame = +1

Query: 181 LTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSK 360
           LT    + +N +     ++   R N   F ++P   PD    YK  E  F  VE+  L  
Sbjct: 7   LTHISRISQNNQSDGSDEDKFRRAN---FPVYPKPLPDRDLSYKADENEFTMVEKASLR- 62

Query: 361 DLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENV 540
             + W  ++  +R F K     F       NE+L+  F ++ ++  ++  +G  +AM  +
Sbjct: 63  --NAWRLIEPFQRRFGKENFYSFLTR----NEDLINFFRKDGKINLSK-LHGHAMAMMKL 115

Query: 541 HSEMYSLL 564
            S++   L
Sbjct: 116 MSKLVQTL 123


>AM086024-1|CAJ30424.1|  222|Drosophila melanogaster globin 2
           protein.
          Length = 222

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 30/128 (23%), Positives = 55/128 (42%)
 Frame = +1

Query: 181 LTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSK 360
           LT    + +N +     ++   R N   F ++P   PD    YK  E  F  VE+  L  
Sbjct: 7   LTHISRISQNNQSDGSDEDKFRRAN---FPVYPKPLPDRDLSYKADENEFTMVEKASLR- 62

Query: 361 DLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENV 540
             + W  ++  +R F K     F       NE+L+  F ++ ++  ++  +G  +AM  +
Sbjct: 63  --NAWRLIEPFQRRFGKENFYSFLTR----NEDLINFFRKDGKINLSK-LHGHAMAMMKL 115

Query: 541 HSEMYSLL 564
            S++   L
Sbjct: 116 MSKLVQTL 123


>AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,
            isoform C protein.
          Length = 1201

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = +1

Query: 76   PTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLREN 255
            PT+  +N H   N    + + +      L  K+ +L ++    +  +E D ++E   RE 
Sbjct: 1028 PTLPPKNRHKNSNRGGAIDSSNANHMQTLPPKSASLRQQQQQQQQQQERDRERE-RERER 1086

Query: 256  PRR 264
            PRR
Sbjct: 1087 PRR 1089


>AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,
            isoform D protein.
          Length = 1404

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = +1

Query: 76   PTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLREN 255
            PT+  +N H   N    + + +      L  K+ +L ++    +  +E D ++E   RE 
Sbjct: 1028 PTLPPKNRHKNSNRGGAIDSSNANHMQTLPPKSASLRQQQQQQQQQQERDRERE-RERER 1086

Query: 256  PRR 264
            PRR
Sbjct: 1087 PRR 1089


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,306,419
Number of Sequences: 53049
Number of extensions: 514684
Number of successful extensions: 1404
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)