Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p20
         (583 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    26   0.31 
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   2.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.7  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   6.7  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     21   6.7  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 274 FPIQYPDIWQMYKKAEASFWTVEEVDLSKD 363
           FP Q P  W++ K AE + + V E DLS D
Sbjct: 217 FPYQPPFAWKILKAAEEAGFGVSE-DLSGD 245


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 363 FIRLGNLKR**ETFHQACPCFLCG 434
           ++ LG LK    T    C C LCG
Sbjct: 26  YVSLGALKMHIRTHTLPCKCHLCG 49


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 325 SFWTVEEVDLSKDL 366
           +FWT  +VDLS+ L
Sbjct: 450 TFWTKSDVDLSRGL 463


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 265 SAAGSPAAEVPFVGRTLRN 209
           +A G P  +VP V R LRN
Sbjct: 66  TADGHPVNDVPGVRRVLRN 84


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 265 SAAGSPAAEVPFVGRTLRN 209
           +A G P  +VP V R LRN
Sbjct: 66  TADGHPVNDVPGVRRVLRN 84


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 225 PTKGTSAAGEPA 260
           P KG +AAG+P+
Sbjct: 530 PAKGAAAAGQPS 541


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 373 SLINPWTNRL 344
           S INPWT +L
Sbjct: 393 SFINPWTKKL 402


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 373 SLINPWTNRL 344
           S INPWT +L
Sbjct: 99  SFINPWTKKL 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,597
Number of Sequences: 438
Number of extensions: 3221
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)