Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p19
         (724 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DD84EF Cluster: PREDICTED: hypothetical protein;...    36   0.77 
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031...    36   0.77 
UniRef50_UPI0000E218A0 Cluster: PREDICTED: hypothetical protein;...    36   1.3  
UniRef50_Q6ZPE9 Cluster: MKIAA3013 protein; n=7; Mus musculus|Re...    34   3.1  
UniRef50_Q3JT18 Cluster: Flavoprotein reductase; n=2; Burkholder...    34   4.1  
UniRef50_Q5JQU2 Cluster: OSJNBa0061C06.11 protein; n=1; Oryza sa...    33   5.4  
UniRef50_UPI0000DB732E Cluster: PREDICTED: hypothetical protein,...    33   7.1  

>UniRef50_UPI0000DD84EF Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 301

 Score = 36.3 bits (80), Expect = 0.77
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -1

Query: 196 HYGYARLSGRESSRRVTSVARPV--QRPSDVAGRRRP-SHRAHATPATCWGGRVARGYPG 26
           H G+ R   R  +RRV S  RP+   RP   +G+  P +HRA       WGG    G PG
Sbjct: 199 HPGHTRRCRRSEARRVHSPRRPLPSSRPEGRSGQGAPAAHRAPTWGRGGWGGAGPPGGPG 258

Query: 25  T 23
           +
Sbjct: 259 S 259


>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
           OJ1031_C12.31; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
          Length = 214

 Score = 36.3 bits (80), Expect = 0.77
 Identities = 28/76 (36%), Positives = 36/76 (47%)
 Frame = -1

Query: 253 FIYVNSSFTT*SRVQNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHA 74
           F+ V+  F    RV++KV H   AR SG +  +R  +V RP      V  RRR    A +
Sbjct: 2   FVRVSCMFV---RVRSKVVHVSGARDSGVQWRQRRGAVGRP----GGVGARRRGGAAAAS 54

Query: 73  TPATCWGGRVARGYPG 26
            PA C  G V  G  G
Sbjct: 55  GPAACGRGGVVEGPSG 70


>UniRef50_UPI0000E218A0 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 350

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 8   AAQRDCARVPACNATA-PTCGWGRVGPVRRPAASSDVARPL 127
           AAQ +   V +  ATA P CGWGR    +RP AS+    PL
Sbjct: 31  AAQHETNPVLSLEATARPWCGWGRTDTAQRPPASTGHGFPL 71


>UniRef50_Q6ZPE9 Cluster: MKIAA3013 protein; n=7; Mus musculus|Rep:
           MKIAA3013 protein - Mus musculus (Mouse)
          Length = 1461

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -1

Query: 244 VNSSFTT*SRV--QNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHAT 71
           V SS  T S+   +N VPH    +LS   +  +V +VA+P +   D A + R       +
Sbjct: 789 VESSANTDSKQLSENSVPHSSEDKLSSDPAVEKVETVAQPAESLVDKAPKPRTRRSRFHS 848

Query: 70  PATCW 56
           P+T W
Sbjct: 849 PSTTW 853


>UniRef50_Q3JT18 Cluster: Flavoprotein reductase; n=2;
           Burkholderia|Rep: Flavoprotein reductase - Burkholderia
           pseudomallei (strain 1710b)
          Length = 421

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 19/40 (47%), Positives = 20/40 (50%)
 Frame = -1

Query: 157 RRVTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVAR 38
           RR +S  RP  RP   A RR    RA A PA C G R  R
Sbjct: 335 RRRSSGTRPTPRPPRDAVRRSAIRRAAARPARCTGARTDR 374


>UniRef50_Q5JQU2 Cluster: OSJNBa0061C06.11 protein; n=1; Oryza
           sativa|Rep: OSJNBa0061C06.11 protein - Oryza sativa
           (Rice)
          Length = 251

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 18/36 (50%), Positives = 19/36 (52%)
 Frame = -1

Query: 142 VARPVQRPSDVAGRRRPSHRAHATPATCWGGRVARG 35
           VA    R  D A RRRP+    AT A C GGR  RG
Sbjct: 95  VAAARGRELDTARRRRPAEEEEATVAGCAGGRGGRG 130


>UniRef50_UPI0000DB732E Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Apis mellifera|Rep: PREDICTED:
           hypothetical protein, partial - Apis mellifera
          Length = 72

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = -1

Query: 205 KVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVARGYPG 26
           K+P +   R   R+++R V +  R  +R S   GR  PS RAH  P  C   +++R  PG
Sbjct: 12  KIPQHSNGR---RKTTRSVCTWDRGSRRTSR-CGRGSPSTRAHPNPDRCNNRQLSRDIPG 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,223,175
Number of Sequences: 1657284
Number of extensions: 12020696
Number of successful extensions: 34559
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34535
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)