Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p19
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358236-1|AAQ88603.1|  183|Homo sapiens QCWQ6494 protein.             31   4.2  
DQ020495-1|AAY84832.1|  754|Homo sapiens neuroblastoma apoptosis...    30   9.6  
AB209038-1|BAD92275.1|  100|Homo sapiens ubiquitin carboxyl-term...    30   9.6  

>AY358236-1|AAQ88603.1|  183|Homo sapiens QCWQ6494 protein.
          Length = 183

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -1

Query: 175 SGRESSRRVTSVARPV-QRPSDVAGRRRPSHRAHATPATCWGGRVARGYPGTVPLRCP 5
           SG + +++V  VA  + Q P        P    H   +TC G    R YP  VP R P
Sbjct: 114 SGPKVAKQVFQVAAELLQHPEHFVPSSVPEGCVHKPGSTCDGSLKGRAYPSCVPKRDP 171


>DQ020495-1|AAY84832.1|  754|Homo sapiens neuroblastoma
           apoptosis-related protease protein.
          Length = 754

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -3

Query: 89  APGPRDPSHMLGRSRCTRVPWHSPAALP 6
           AP PR P  +LG  RC R+  H P  LP
Sbjct: 131 APEPRAPRDLLGCPRCRRL-LHKPVTLP 157


>AB209038-1|BAD92275.1|  100|Homo sapiens ubiquitin
           carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
           variant protein.
          Length = 100

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 27  PGYPRATRPPQHVAGVAWA-RCDGRRRPATSLG 122
           P  PR  RPP   AG   A RC+ RRRP   +G
Sbjct: 59  PRAPRRGRPPVPAAGRDQAARCEHRRRPGWGVG 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,643,232
Number of Sequences: 237096
Number of extensions: 1766736
Number of successful extensions: 8093
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8090
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)