Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p18
         (659 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical ...    29   2.2  
AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical ...    29   2.2  
AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z81557-6|CAB04529.1|  357|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z73426-6|CAA97796.2|  853|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z73425-9|CAA97791.2|  853|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione s...    29   3.9  
Z93379-1|CAB07589.1|  218|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical ...    28   5.1  
Z81479-4|CAB03939.1|  116|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AC006723-1|AAF59429.3|  534|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical
           protein F46B6.8 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 9/31 (29%), Positives = 22/31 (70%)
 Frame = +3

Query: 567 ENNEDFHLNATELLKKHQYPVEEHTVATDDG 659
           +++ + ++N ++++++  Y  E HTV T+DG
Sbjct: 26  DDDPELNMNTSQIIERWGYKAEVHTVTTEDG 56


>AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical
           protein ZK6.7b protein.
          Length = 351

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 579 DFHLNATELLKKHQYPVEEHTVATDDG 659
           + H+   +++++  YP   +TVATDDG
Sbjct: 24  ELHMTTPQIIERWGYPAMIYTVATDDG 50


>AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK6.7a protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 579 DFHLNATELLKKHQYPVEEHTVATDDG 659
           + H+   +++++  YP   +TVATDDG
Sbjct: 24  ELHMTTPQIIERWGYPAMIYTVATDDG 50


>AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical
           protein R11G11.14 protein.
          Length = 404

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 9/38 (23%), Positives = 22/38 (57%)
 Frame = +3

Query: 546 AISETQRENNEDFHLNATELLKKHQYPVEEHTVATDDG 659
           A+     +++ + H+   +++++  YP   ++V TDDG
Sbjct: 14  AVHNVHAKSDPELHMTTPQIIERWGYPAMIYSVTTDDG 51


>Z81557-6|CAB04529.1|  357|Caenorhabditis elegans Hypothetical
           protein F59A1.12 protein.
          Length = 357

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = -1

Query: 422 YILPNDGIAVIDINFFLEFHNDRIHRR--VVFHVHLIVRLL 306
           Y  PNDG+A  D   ++++ N  +     ++ H+H+I+RLL
Sbjct: 16  YTRPNDGLA--DCGEWIQYLNRVVSLTTCIILHIHIILRLL 54


>Z73426-6|CAA97796.2|  853|Caenorhabditis elegans Hypothetical
           protein F12F6.1 protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 420 IEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKKNTFHDAI 551
           +E A+G  +P+  +   + +F D++  +    D AK+N  HDA+
Sbjct: 345 LEAANG-QAPIYAQSLAKILFADTIMMYFKDQDTAKRNWLHDAV 387


>Z73425-9|CAA97791.2|  853|Caenorhabditis elegans Hypothetical
           protein F12F6.1 protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 420 IEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKKNTFHDAI 551
           +E A+G  +P+  +   + +F D++  +    D AK+N  HDA+
Sbjct: 345 LEAANG-QAPIYAQSLAKILFADTIMMYFKDQDTAKRNWLHDAV 387


>AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione
           s-transferase protein34 protein.
          Length = 218

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = +3

Query: 294 EDETKQAHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMASGPNSPVQ-TEQ 464
           E+E K+ HD++ +   + ++ ++ ++ KE    +  GD + W ++ +A    S     E 
Sbjct: 124 EEEVKRIHDEVYIPVKNLLFKILTRILKESKSEYLVGDGLTWADLVVADHLYSLTNIKEL 183

Query: 465 DIEDIFGDSLKTW 503
           D ED    +LK +
Sbjct: 184 DPEDPIHLNLKKY 196


>Z93379-1|CAB07589.1|  218|Caenorhabditis elegans Hypothetical
           protein F21H7.1 protein.
          Length = 218

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +3

Query: 297 DETKQAHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMA 431
           +E KQ HDK+ +   + ++ ++ ++ KE       GD + W ++ +A
Sbjct: 125 EEVKQIHDKVYIPAKNLMFKILTRILKENKSGFLVGDGLTWADLVVA 171


>AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical
           protein Y50E8A.7 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 588 LNATELLKKHQYPVEEHTVATDDG 659
           L+A + +  + Y VE+H V TDDG
Sbjct: 23  LDAADTISHYGYTVEKHYVTTDDG 46


>Z81479-4|CAB03939.1|  116|Caenorhabditis elegans Hypothetical
           protein C34F6.5 protein.
          Length = 116

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +3

Query: 414 KNIEMASGPNSP----VQTEQDIEDIFGDSLKTWDHFTDDAKKN 533
           +N+E A+GP+ P    VQ EQD+E+I  D  +  D   +D  +N
Sbjct: 37  RNMEHAAGPSPPVEQGVQLEQDLEEII-DIHEVDDEEEEDEDQN 79


>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
           protein R08B4.1b protein.
          Length = 1160

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
 Frame = +3

Query: 342 SPVYSVIMKLK-----KEVDINHGDSVVWKNIEMASGPNSPVQTEQDIEDIFGDSLKTWD 506
           SP YS   K+K     +  DINH    +W   +    P   +  E   E++     KT  
Sbjct: 14  SPHYSEANKIKLKSSGRSADINHDSPCIWNKTQSWVHPYQSITVECCDEELSKLIHKTIL 73

Query: 507 HFTDDAKKNTFHDAISETQRENNEDFHLNATELLKKHQYPVEEH 638
              ++AK       I   QR +   +H++   ++ +  + +  H
Sbjct: 74  DAGNNAKLGNLAKFI---QRRSQLFYHMSFETIVSRENFAISTH 114


>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
           protein R08B4.1a protein.
          Length = 1137

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
 Frame = +3

Query: 342 SPVYSVIMKLK-----KEVDINHGDSVVWKNIEMASGPNSPVQTEQDIEDIFGDSLKTWD 506
           SP YS   K+K     +  DINH    +W   +    P   +  E   E++     KT  
Sbjct: 14  SPHYSEANKIKLKSSGRSADINHDSPCIWNKTQSWVHPYQSITVECCDEELSKLIHKTIL 73

Query: 507 HFTDDAKKNTFHDAISETQRENNEDFHLNATELLKKHQYPVEEH 638
              ++AK       I   QR +   +H++   ++ +  + +  H
Sbjct: 74  DAGNNAKLGNLAKFI---QRRSQLFYHMSFETIVSRENFAISTH 114


>AC006723-1|AAF59429.3|  534|Caenorhabditis elegans Hypothetical
           protein Y19D10B.2 protein.
          Length = 534

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 408 VWKNIEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTD 518
           V+ N+E+  GPNS + T + IE IFG  +    + TD
Sbjct: 135 VFGNVEI--GPNSNLDTMKSIEIIFGSLIINETNLTD 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,117,506
Number of Sequences: 27780
Number of extensions: 241813
Number of successful extensions: 712
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)