Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p17
(629 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 72 3e-13
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 57 1e-08
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 52 3e-07
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 50 1e-06
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 50 1e-06
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 49 3e-06
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 46 2e-05
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 44 1e-04
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 44 1e-04
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 43 2e-04
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 41 0.001
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 40 0.002
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 38 0.007
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 38 0.009
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 36 0.021
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 36 0.027
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 35 0.063
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 32 0.44
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 31 1.0
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 30 1.8
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 29 2.4
SB_20049| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05) 29 3.1
SB_19313| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-27) 29 3.1
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_49640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 104 bits (250), Expect = 5e-23
Identities = 49/69 (71%), Positives = 59/69 (85%)
Frame = +1
Query: 421 KFTALEGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPA 600
+F+AL V E TL GIKDMGF TMTEIQ K+I PLL+GRDL+GAAKTGSGKTLAFL+P
Sbjct: 571 EFSALSEDVSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPV 630
Query: 601 IDLIYKLKF 627
++L+YKL+F
Sbjct: 631 VELLYKLQF 639
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/61 (54%), Positives = 46/61 (75%)
Frame = +1
Query: 445 VCEPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIDLIYKLK 624
+ + TL G+ GF+T T+IQ + IP L GRD++GAAKTGSGKTLAFLIP I+ +++ K
Sbjct: 57 ISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIETLWRQK 116
Query: 625 F 627
+
Sbjct: 117 W 117
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +1
Query: 478 MGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 603
MG TEIQ +PP+L+GRD +G AKTGSGKT AF +P +
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPIL 66
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 56.8 bits (131), Expect = 1e-08
Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +1
Query: 436 EGTVCEPTLL-GIKDMGFITMTEIQAKAIPP-LLEGRDLVGAAKTGSGKTLAFLIPAIDL 609
EG P +L + D GF T IQ+ +IPP LL RD++GAA+TGSGKTLAF IP I
Sbjct: 133 EGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQH 192
Query: 610 IYKLK 624
I K
Sbjct: 193 IEAYK 197
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +1
Query: 451 EPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 603
E + I+ + + T+IQ +A+P L GRD++G AKTGSGKT AFL PA+
Sbjct: 526 EQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPAL 576
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 412 SDQKFTALEGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFL 591
SD+ A + E + ++GF+ T IQA IP L G+D+ A TG+GKT AF+
Sbjct: 6 SDEVLNAYDSLDEEAEDRAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFM 65
Query: 592 IPAID-LIYK 618
+P ++ L+Y+
Sbjct: 66 LPILERLLYR 75
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +1
Query: 460 LLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAID 606
L+GI + GF + IQ ++IP L GRD++ AK G+GKT A+L+P ++
Sbjct: 59 LMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLE 107
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +1
Query: 460 LLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAID 606
L+GI + GF + IQ ++IP L GRD++ AK G+GKT A+L+P ++
Sbjct: 59 LMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLE 107
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +1
Query: 457 TLLGIKD-MGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 603
++L I D +G+ T IQ +AIP L+ RD++G A+TGSGKT AF IP +
Sbjct: 111 SILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLL 160
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +1
Query: 451 EPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIDLIYK 618
E + I G+ T +Q A+P ++ GRDL+ A+TGSGKT A+++P + + K
Sbjct: 488 EQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPVLTSLIK 543
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +1
Query: 445 VCEPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAID 606
+ + T+ ++D G + IQA + +G D++G A+TG+GKTL+F +P ++
Sbjct: 80 ISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVE 133
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +1
Query: 481 GFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIDLIY 615
G+ T +Q AIP + RDL+ A+TGSGKT AFLIP + IY
Sbjct: 894 GYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPILSRIY 938
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +1
Query: 436 EGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 603
E + E L ++ + T +Q +IP ++ GRD++ A+TGSGKT AFL+P +
Sbjct: 715 EANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPVM 770
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +1
Query: 454 PTLL-GIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAID 606
PTLL G+ + GF + IQ KAIP G DL+ AK+G+GKT F + A++
Sbjct: 22 PTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALE 73
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +1
Query: 484 FITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIDLI 612
F T IQ +++ ++ GRD++G A+TGSGKTLA+ +P L+
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLL 134
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +1
Query: 481 GFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIDLI 612
GF + IQ +AI P+L+GRD++ A++G+GKT F I + I
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAI 59
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +1
Query: 478 MGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIDLI 612
+G T +Q P LL GRD+ G A GSGK LA+L+P I I
Sbjct: 205 LGVTVPTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQI 249
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1
Query: 511 KAIPPLLEGRDLVGAAKTGSGKTLAFLIPAID 606
K +P +++G+D+V A+TGSGKT AFLIP +
Sbjct: 310 KTLPLVMDGKDVVAMARTGSGKTAAFLIPMFE 341
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 469 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 603
+K MG IQ KA+P + + L+ ++TG+GK+L FL+P++
Sbjct: 175 LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV 219
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 451 EPTLL-GIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 603
+P LL I D GF +E+Q + IP + G D++ AK+G GKT F++ +
Sbjct: 55 KPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATL 106
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 451 EPTLL-GIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 603
+P LL I D GF +E+Q + IP + G D++ AK+G GKT F++ +
Sbjct: 55 KPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATL 106
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 496 TEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 603
T IQ IP ++ ++ AA+TGSGKTLA+L P +
Sbjct: 402 TVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLV 437
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 469 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTL 582
+ + G+ + T IQ + +P LL GRD++ A TGSGK L
Sbjct: 211 LSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGKLL 248
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 436 EGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKT 579
E + E L ++ + T +Q +IP ++ GRD++ A+TGSGKT
Sbjct: 138 EANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +1
Query: 466 GIKDMGFITMTEIQAKAIPPLLEGR--DLVGAAKTGSGKTLAFLIPAIDLI 612
G+ DMGF ++IQ A+P LL +++ +++G+GKT AF++ + +
Sbjct: 117 GVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLTMLSRV 167
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +1
Query: 436 EGTVCEPTLL-GIKDMGFITMTEIQAKAIPP-LLEGRDLVGAAKT 564
EG P +L + D GF T IQ+ +IPP LL RD++GAA+T
Sbjct: 75 EGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 34.7 bits (76), Expect = 0.063
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 481 GFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 603
G+I +Q +AI LL +D + TG+GKT+ + IPA+
Sbjct: 136 GYIDFRPMQRQAIDTLLAEKDSLILLPTGAGKTICYAIPAL 176
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 538 RDLVGAAKTGSGKTLAFLIPAIDLI 612
+D++G A+TGSGKT AF +P + +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQAL 26
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 579 CFSRASFGSTHKIPAFQQRRYSFSLN 502
CF+ A G++H++ AFQ RR LN
Sbjct: 84 CFAGAGLGASHQVAAFQHRRDRLLLN 109
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 496 TEIQAKAIPPLLEGR-DLVGAAKTGSGKTLAFLIPAI 603
+E+Q +A + +GR D+ + TGSGK+L + +PA+
Sbjct: 20 SELQQRACETVSKGRQDVFVSMPTGSGKSLCYQLPAV 56
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 490 TMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 603
T +Q + I + G D + TG GK+L F +PA+
Sbjct: 89 TFRHLQLECINATMSGVDCILIMPTGGGKSLCFQLPAV 126
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 478 MGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPA 600
+GF + Q +A+ +L G + TG+GK+L + +PA
Sbjct: 520 LGFSSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPA 560
>SB_20049| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05)
Length = 1023
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 515 LYLLCWKAGILWVLPKL-ALE 574
+ LLCW G+L+VLP+L ALE
Sbjct: 891 IILLCWIGGLLYVLPQLIALE 911
>SB_19313| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-27)
Length = 545
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 515 LYLLCWKAGILWVLPKL-ALE 574
+ LLCW G+L+VLP+L ALE
Sbjct: 139 IILLCWIGGLLYVLPQLIALE 159
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 469 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKT 564
+K + T IQA+AIP ++ GRD++ T
Sbjct: 120 LKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMT 151
>SB_49640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1177
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 538 RDLVGAAKTGSGKTLAFLIPAIDLIYK 618
R LV A TGSGKT+ F + I LI K
Sbjct: 351 RPLVVCAPTGSGKTVIFELAIIRLIMK 377
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +1
Query: 526 LLEGRDLVGAAKTGSGKTLAF---LIPAIDLIYKLK 624
+L RD++ A++G+GKT F ++ ID YK K
Sbjct: 119 VLSARDVIAQAQSGTGKTATFAISILQEIDTNYKDK 154
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,978,634
Number of Sequences: 59808
Number of extensions: 211215
Number of successful extensions: 620
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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