Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p16
         (676 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g54760.1 68416.m06059 dentin sialophosphoprotein-related cont...    29   2.1  
At5g48590.1 68418.m06010 expressed protein                             29   3.8  
At3g23370.1 68416.m02947 expressed protein ; expression supporte...    28   5.0  
At2g28460.1 68415.m03457 DC1 domain-containing protein contains ...    27   8.7  

>At3g54760.1 68416.m06059 dentin sialophosphoprotein-related
           contains weak similarity to Swiss-Prot:Q9NZW4 dentin
           sialophosphoprotein precursor (Dentin phosphophoryn DPP,
           Dentin sialoprotein DSP) [Homo sapiens]
          Length = 792

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +2

Query: 461 GGEACSPAGVK--WLLKPIEIKNNLQRKCRPPHREMSSKVSAP 583
           GGE  +PA  K  + + P+E+K    ++ R P+R   S++S P
Sbjct: 632 GGEGQTPATEKGNYQVVPVELKPAQVQRTRRPYRRRQSQISIP 674


>At5g48590.1 68418.m06010 expressed protein
          Length = 344

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -3

Query: 428 VKLYSCNHLVKIS-SQHNPN*ITSNIKHYVPHFNESQMRHCGF-RSHD 291
           +K  S  H ++ S SQH+ +  T  ++HY+  F+   +R C   RSH+
Sbjct: 227 LKSASLRHQLECSLSQHHGS-FTKQLRHYISEFDPKILRRCAKPRSHE 273


>At3g23370.1 68416.m02947 expressed protein ; expression supported
           by MPSS
          Length = 717

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
 Frame = +2

Query: 389 RIFLLND-YMNIILPLQFFFIAN----ITGGEACSPAGVKWLLKPIEIKNNLQRKCRPPH 553
           ++F+ +D Y  +  PL+F  ++N    ++ GE+CS AG +  L    + + +Q     P+
Sbjct: 199 KLFVNSDPYKEVKHPLRFETLSNSNSSMSTGESCSDAGDQHSLFGKMLSDPVQEIKSIPN 258

Query: 554 REMSSKVSAPPFNLKRITA 610
                ++S  P NL  +T+
Sbjct: 259 ENDEHRLSDAPQNLSSLTS 277


>At2g28460.1 68415.m03457 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 704

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 273 DTLSQYFTAANEIKT*YTFKKHSKLIFILQQSLYTTVCF 157
           D   +Y  A  EIK     +KHS  + +L +S YT VC+
Sbjct: 193 DNHKEYEKAPVEIKH-SLHRKHSLQLVLLDESSYTRVCY 230


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,379,344
Number of Sequences: 28952
Number of extensions: 254329
Number of successful extensions: 467
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)