Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p15
         (583 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.15 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.27 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   0.82 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   0.82 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.8  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -2

Query: 408 FSKSLIVFVFCSLQVFVLCIQFL*VREEISLNNFCYALHIS 286
           F   +   V+CSL +FVLC   +     I +N     +H+S
Sbjct: 406 FCTLVTALVYCSLAIFVLCELLIEGTTSILINVPSLIIHVS 446


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 529  WEHPHCW*QECTAG 488
            WE+P CW  +C  G
Sbjct: 1944 WEYPKCWQVDCNKG 1957



 Score = 25.8 bits (54), Expect = 0.27
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 529  WEHPHCW*QECTAG 488
            WE+P CW  +C  G
Sbjct: 2442 WEYPKCWQVDCNKG 2455



 Score = 25.4 bits (53), Expect = 0.35
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 529  WEHPHCW*QECTAG 488
            WE+P CW  +C  G
Sbjct: 1519 WEYPKCWQVDCKKG 1532



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 367 LEATENKDYQRLRELTQKYSGNRPPTEPYNT 459
           L +T N+ + R  EL        PPT+PY T
Sbjct: 530 LLSTINR-HLRGNELLPMQQSQNPPTKPYGT 559



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = -1

Query: 529 WEHPHCW*QECTAG 488
           W +P CW   C  G
Sbjct: 756 WNYPVCWQSNCKKG 769


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -3

Query: 248 CLGIFGTLNTVVSAFNSFMFCNAASPGLIALPPADILYNVCC 123
           CLG+ G +   +  F +    N+ +  L+ L  AD++  + C
Sbjct: 80  CLGVIGNVMVPIVIFKTKDMRNSTNIFLVNLSVADLMVLLVC 121


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -3

Query: 248 CLGIFGTLNTVVSAFNSFMFCNAASPGLIALPPADILYNVCC 123
           CLG+ G +   +  F +    N+ +  L+ L  AD++  + C
Sbjct: 80  CLGVIGNVMVPIVIFKTKDMRNSTNIFLVNLSVADLMVLLVC 121


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = +1

Query: 415 QKYSGNRPPTEPYNTPATFDTPNIDRPCTPATN 513
           + Y     P+ PY  P +  +  +  PC  + N
Sbjct: 201 RNYGPEPVPSTPYPPPGSLGSMGVSVPCGTSGN 233


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/33 (24%), Positives = 13/33 (39%)
 Frame = +1

Query: 445 EPYNTPATFDTPNIDRPCTPATNNEDAPRQTKN 543
           EP       D   + RP  PA      P+++ +
Sbjct: 328 EPKRPRPNIDRHEVTRPAAPANRGNGFPKRSSD 360


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 5/19 (26%), Positives = 12/19 (63%)
 Frame = -1

Query: 154 LQLTFFIMFVACLIMCVYK 98
           L   F+  +  C+I+C+++
Sbjct: 152 LYFQFYYTYFLCVIVCIFR 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,870
Number of Sequences: 336
Number of extensions: 2838
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)