Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p15
         (583 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L78010-1|AAL40039.1|  476|Homo sapiens ES2 protein.                    91   2e-18
CR456344-1|CAG30230.1|  476|Homo sapiens Em:AC004471.1 protein.        91   2e-18
BC006542-1|AAH06542.1|  476|Homo sapiens DiGeorge syndrome criti...    91   2e-18
BC003015-1|AAH03015.1|  475|Homo sapiens Similar to expressed se...    91   2e-18
AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J recom...    31   3.9  
AK092791-1|BAC03976.1|  133|Homo sapiens protein ( Homo sapiens ...    30   6.8  

>L78010-1|AAL40039.1|  476|Homo sapiens ES2 protein.
          Length = 476

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
 Frame = +1

Query: 274 LEEDAYVEGIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSG-----NRP 438
           L+E+ Y+EG+  +IQRDFFPD+EKL AQ EYLEA EN D +R+R++  K+       +R 
Sbjct: 38  LDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKFGSALGKMSRE 97

Query: 439 PTEPYNTPATFDTPNIDRPCTPATNNEDAPR 531
           P  PY TPATF+TP +    T    N+  PR
Sbjct: 98  PPPPYVTPATFETPEV-HAGTGVVGNKPRPR 127


>CR456344-1|CAG30230.1|  476|Homo sapiens Em:AC004471.1 protein.
          Length = 476

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
 Frame = +1

Query: 274 LEEDAYVEGIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSG-----NRP 438
           L+E+ Y+EG+  +IQRDFFPD+EKL AQ EYLEA EN D +R+R++  K+       +R 
Sbjct: 38  LDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKFGSALGKMSRE 97

Query: 439 PTEPYNTPATFDTPNIDRPCTPATNNEDAPR 531
           P  PY TPATF+TP +    T    N+  PR
Sbjct: 98  PPPPYVTPATFETPEV-HAGTGVVGNKPRPR 127


>BC006542-1|AAH06542.1|  476|Homo sapiens DiGeorge syndrome critical
           region gene 14 protein.
          Length = 476

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
 Frame = +1

Query: 274 LEEDAYVEGIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSG-----NRP 438
           L+E+ Y+EG+  +IQRDFFPD+EKL AQ EYLEA EN D +R+R++  K+       +R 
Sbjct: 38  LDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKFGSALGKMSRE 97

Query: 439 PTEPYNTPATFDTPNIDRPCTPATNNEDAPR 531
           P  PY TPATF+TP +    T    N+  PR
Sbjct: 98  PPPPYVTPATFETPEV-HAGTGVVGNKPRPR 127


>BC003015-1|AAH03015.1|  475|Homo sapiens Similar to expressed
           sequence 2 embryonic lethal protein.
          Length = 475

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
 Frame = +1

Query: 274 LEEDAYVEGIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSG-----NRP 438
           L+E+ Y+EG+  +IQRDFFPD+EKL AQ EYLEA EN D +R+R++  K+       +R 
Sbjct: 37  LDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKFGSALGKMSRE 96

Query: 439 PTEPYNTPATFDTPNIDRPCTPATNNEDAPR 531
           P  PY TPATF+TP +    T    N+  PR
Sbjct: 97  PPPPYVTPATFETPEV-HAGTGVVGNKPRPR 126


>AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J
            recombination signal sequences binding protein protein.
          Length = 2406

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 379  ENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTP 504
            E +DY + RE T    G  P   P+ T A  +      PCTP
Sbjct: 2270 EGRDYPKERERTGGGPGRPPDWTPHGTGAPAEPTPTHSPCTP 2311


>AK092791-1|BAC03976.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35472 fis, clone SMINT2007062. ).
          Length = 133

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 400 LRELTQKYSGNR-PPTEPYNTPATFDTPNIDRPCTP 504
           L E T +Y  +R PP  P+ TP   + P    PC+P
Sbjct: 89  LAERTHRYRFSRLPPPTPFRTPGRPNIPPYTCPCSP 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,719,110
Number of Sequences: 237096
Number of extensions: 1543060
Number of successful extensions: 7987
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7980
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)