Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p15
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical pr... 66 1e-11
L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical pr... 66 1e-11
U58763-1|AAK68877.2| 559|Caenorhabditis elegans Hypothetical pr... 32 0.34
AL117207-16|CAH60778.1| 402|Caenorhabditis elegans Hypothetical... 32 0.34
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 30 1.4
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 30 1.4
AF099925-15|AAC69510.2| 585|Caenorhabditis elegans Calcium bind... 29 2.4
AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium bind... 29 2.4
Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical... 29 3.2
AF045642-11|AAC02584.1| 443|Caenorhabditis elegans Hypothetical... 28 4.2
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 28 5.6
U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily ass... 27 7.4
AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily a... 27 7.4
Z81536-9|CAB04362.1| 733|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF040645-1|AAB94973.1| 377|Caenorhabditis elegans Hypothetical ... 27 9.7
>L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical
protein F42H10.7b protein.
Length = 531
Score = 66.5 bits (155), Expect = 1e-11
Identities = 35/99 (35%), Positives = 51/99 (51%)
Frame = +1
Query: 280 EDAYVEGIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNT 459
E+ Y+ G+ KII++D+FP L+K+ AQ EYLEA NKD +++EL K+ T T
Sbjct: 44 EEKYIAGLDKIIEKDYFPHLKKMQAQKEYLEAVANKDINKIKELQMKFCS----TGSVRT 99
Query: 460 PATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITD 576
+F TP R T A + T + T+ D
Sbjct: 100 DRSFRTPITTRSTTEAPDVSSFDADTPGPSSASTSSAHD 138
>L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical
protein F42H10.7a protein.
Length = 529
Score = 66.5 bits (155), Expect = 1e-11
Identities = 35/99 (35%), Positives = 51/99 (51%)
Frame = +1
Query: 280 EDAYVEGIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNT 459
E+ Y+ G+ KII++D+FP L+K+ AQ EYLEA NKD +++EL K+ T T
Sbjct: 44 EEKYIAGLDKIIEKDYFPHLKKMQAQKEYLEAVANKDINKIKELQMKFCS----TGSVRT 99
Query: 460 PATFDTPNIDRPCTPATNNEDAPRQTKNATKDKTADITD 576
+F TP R T A + T + T+ D
Sbjct: 100 DRSFRTPITTRSTTEAPDVSSFDADTPGPSSASTSSAHD 138
>U58763-1|AAK68877.2| 559|Caenorhabditis elegans Hypothetical
protein F10C5.2 protein.
Length = 559
Score = 31.9 bits (69), Expect = 0.34
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 289 YVEGIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQ--KYSGNRP 438
Y G+ K + R FFP +L + EY E E ++L +L + K GNRP
Sbjct: 302 YFVGL-KAVWRKFFPARRRLLNEEEYEEQAEKTTKEQLAQLREYCKKEGNRP 352
>AL117207-16|CAH60778.1| 402|Caenorhabditis elegans Hypothetical
protein Y60A3A.24 protein.
Length = 402
Score = 31.9 bits (69), Expect = 0.34
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +1
Query: 337 LEKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNN 516
L KLN Q + E+ + R + L + G R E + P + P+I+ +NN
Sbjct: 58 LAKLNQQRAERQLVEHNAFHRAQALLLEDDGQRSIPEGHLMPLDYARPDIEDEPIIRSNN 117
Query: 517 EDA--PRQTKNATKDKTADITDN 579
E Q K A K +D +N
Sbjct: 118 EIVIDTVQNKRAIKRPNSDFFEN 140
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Frame = +1
Query: 322 DFFPDLEKLN---AQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDR 492
D FP+ E+L T N Q++ + S + PP EP TP TP
Sbjct: 358 DLFPETRGAEPGCTAGEWLNGT-NAVPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVP 416
Query: 493 PCTPATNNEDAPRQTKNATKDKTADITDNH 582
TPA P N++ + + + H
Sbjct: 417 VPTPAA--APRPMSNNNSSSNNVPSVQEQH 444
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Frame = +1
Query: 322 DFFPDLEKLN---AQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDR 492
D FP+ E+L T N Q++ + S + PP EP TP TP
Sbjct: 358 DLFPETRGAEPGCTAGEWLNGT-NAVPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVP 416
Query: 493 PCTPATNNEDAPRQTKNATKDKTADITDNH 582
TPA P N++ + + + H
Sbjct: 417 VPTPAA--APRPMSNNNSSSNNVPSVQEQH 444
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Frame = +1
Query: 322 DFFPDLEKLN---AQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDR 492
D FP+ E+L T N Q++ + S + PP EP TP TP
Sbjct: 358 DLFPETRGAEPGCTAGEWLNGT-NAVPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVP 416
Query: 493 PCTPATNNEDAPRQTKNATKDKTADITDNH 582
TPA P N++ + + + H
Sbjct: 417 VPTPAA--APRPMSNNNSSSNNVPSVQEQH 444
>AF099925-15|AAC69510.2| 585|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform a protein.
Length = 585
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 298 GIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRL--RELTQKYSGNRPPTEPYNTPATF 471
GI + + + FF ++ ++ + + A E D++ L ++Q+ PP+ T T
Sbjct: 432 GIPRSMIKTFFDRID-VDGSGDLMPA-EIVDFRHLIRNHVSQQRQEKPPPSTTPITTTTE 489
Query: 472 DTPNIDRPCTPATNNEDAPRQTKNATK 552
DTP I P T T P + TK
Sbjct: 490 DTPLITTPETTITPTTTVPEEVTVTTK 516
>AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform d protein.
Length = 679
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 298 GIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRL--RELTQKYSGNRPPTEPYNTPATF 471
GI + + + FF ++ ++ + + A E D++ L ++Q+ PP+ T T
Sbjct: 432 GIPRSMIKTFFDRID-VDGSGDLMPA-EIVDFRHLIRNHVSQQRQEKPPPSTTPITTTTE 489
Query: 472 DTPNIDRPCTPATNNEDAPRQTKNATK 552
DTP I P T T P + TK
Sbjct: 490 DTPLITTPETTITPTTTVPEEVTVTTK 516
>Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 382 NKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDAP 528
N D R +T + PP PYN+ A + P TP + N AP
Sbjct: 327 NVDRPRTPPVTPASAAPPPPGIPYNSVAAGRSTTTPVPSTPISANSPAP 375
>AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 382 NKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDAP 528
N D R +T + PP PYN+ A + P TP + N AP
Sbjct: 327 NVDRPRTPPVTPASAAPPPPGIPYNSVAAGRSTTTPVPSTPISANSPAP 375
>AF045642-11|AAC02584.1| 443|Caenorhabditis elegans Hypothetical
protein C17H12.5 protein.
Length = 443
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/48 (39%), Positives = 20/48 (41%)
Frame = +1
Query: 409 LTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATK 552
L+ K S E TP F P P T AT DAP TK A K
Sbjct: 90 LSAKTSTPHKSIEAALTPVAFSPP----PATQATQAMDAPATTKTAVK 133
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 307 KIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSGNR 435
K+ Q +F ++ KL +QN+Y ++ + R+R L + S R
Sbjct: 235 KVKQNEFEVEITKLKSQNDYFDSERLQLTDRIRALLNELSDVR 277
>U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily
assigned gene nameprotein 127 protein.
Length = 862
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/59 (23%), Positives = 22/59 (37%)
Frame = +1
Query: 322 DFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPC 498
D + L N E + N + L Q+ + P + TPA +P + PC
Sbjct: 602 DLYVSLGAENGDIERPRSRSNSSGPEIEGLKQRSRSSSPDQKELGTPAQIGSPQTNTPC 660
>AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily
assigned gene nameprotein 196 protein.
Length = 477
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 555 VFSGIFCLSGSILIVGSRSARPVNVWRVKSGWGVIW 448
+F F L+ +LIVG W VK+ WG W
Sbjct: 415 IFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPNW 450
>Z81536-9|CAB04362.1| 733|Caenorhabditis elegans Hypothetical
protein F40D4.12 protein.
Length = 733
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 328 FPDLEKLNAQNEYLEATENKDYQRLRELTQKYSGN 432
F +LE+ E + TENK R+L QKY N
Sbjct: 474 FLELEEKIRHCELCQETENKHRNEFRKLLQKYRWN 508
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/62 (24%), Positives = 21/62 (33%)
Frame = +1
Query: 376 TENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKNATKD 555
TE + T++ + P TP T T + TP T P T + T
Sbjct: 37 TEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTST 96
Query: 556 KT 561
T
Sbjct: 97 TT 98
>AF040645-1|AAB94973.1| 377|Caenorhabditis elegans Hypothetical
protein F52C6.5 protein.
Length = 377
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 504 RSARPVNVWRVKSGWGVIWFCRWS 433
RSA+ NV+ V S WG++ F W+
Sbjct: 166 RSAQYTNVFGVGSLWGILKFISWN 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,294,847
Number of Sequences: 27780
Number of extensions: 251423
Number of successful extensions: 909
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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