Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p15
(583 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g07790.1 68416.m00951 DGCR14-related similar to DGCR14 protei... 52 2e-07
At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3... 32 0.24
At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3) ... 31 0.42
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 31 0.74
At1g29110.1 68414.m03563 cysteine proteinase, putative contains ... 30 0.98
At1g21510.1 68414.m02690 hypothetical protein 30 0.98
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 29 3.0
At5g17320.1 68418.m02029 homeobox-leucine zipper family protein ... 28 4.0
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 28 4.0
At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR... 28 5.2
At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR... 28 5.2
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 28 5.2
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 28 5.2
At2g40150.1 68415.m04938 expressed protein 28 5.2
At4g16950.2 68417.m02557 disease resistance protein (TIR-NBS-LRR... 27 6.9
At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR... 27 6.9
At5g56660.1 68418.m07073 IAA-amino acid hydrolase 2 (ILL2) ident... 27 9.1
At4g23520.1 68417.m03390 cysteine proteinase, putative contains ... 27 9.1
At3g18600.1 68416.m02364 DEAD/DEAH box helicase, putative non-co... 27 9.1
At2g46020.2 68415.m05725 transcription regulatory protein SNF2, ... 27 9.1
At2g46020.1 68415.m05724 transcription regulatory protein SNF2, ... 27 9.1
At2g41180.1 68415.m05086 sigA-binding protein-related low simila... 27 9.1
At2g30320.1 68415.m03690 tRNA pseudouridine synthase family prot... 27 9.1
>At3g07790.1 68416.m00951 DGCR14-related similar to DGCR14 protein
(DiGeorge syndrome critical region 14) (ES2 protein)
(Swiss-Prot:Q96DF8) [Homo sapiens]
Length = 508
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/49 (44%), Positives = 36/49 (73%)
Frame = +1
Query: 274 LEEDAYVEGIAKIIQRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQK 420
L+EDAYVE I KII+RD+FPD+ KL + ++++A + +D ++R+ K
Sbjct: 48 LDEDAYVEAIEKIIERDYFPDITKLRDRLDWIQAVKTRDPIQIRDAQLK 96
>At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3)
contains Pfam profile: Myb DNA-binding proteins;
identical to cDNA putative c-myb-like transcription
factor (MYB3R3) GI:15375285
Length = 505
Score = 32.3 bits (70), Expect = 0.24
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 352 AQNEY-LEATENKDYQRLREL-TQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNEDA 525
A N Y L T DY R E+ TQ+ GN P +P +F TP PC +N
Sbjct: 330 ANNGYHLYYTPQIDYYRASEVDTQRMYGNECGCSPSASPVSFFTP---PPCRNVHSNGST 386
Query: 526 PRQTKNATKD 555
PR ++ ++
Sbjct: 387 PRSPESYLRE 396
>At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3)
identical to papain-like cysteine peptidase XBCP3
GI:14600257 from [Arabidopsis thaliana]; contains Pfam
profiles PF00112: Papain family cysteine protease and
PF00396: Granulin
Length = 437
Score = 31.5 bits (68), Expect = 0.42
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -2
Query: 555 VFSG--IFCLSGSILIVGSRSARPVNVWRVKSGWGVIW 448
+FSG L ++LIVG S V+ W VK+ WG W
Sbjct: 267 IFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSW 304
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 30.7 bits (66), Expect = 0.74
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +1
Query: 337 LEKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNIDRP---CTPA 507
+E+LN + L A + Q+L +++ YS + +E T A D I R
Sbjct: 341 IEELNTRITTLVAEKESYIQKLDSISKDYSALKLTSE---TQAAADAELISRKEQEIQQL 397
Query: 508 TNNEDAPRQTKNATKDKTADITDNH 582
N D N +KDK AD+T+ +
Sbjct: 398 NENLDRALDDVNKSKDKVADLTEKY 422
>At1g29110.1 68414.m03563 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 334
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -2
Query: 561 GFVFSGIFC---LSGSILIVGSRSARPVNVWRVKSGWGVIW 448
G V++G+ C ++ ++ IVG + +N W +K+ WG W
Sbjct: 264 GGVYAGLDCGTDVNHAVTIVGYGTMSGLNYWVLKNSWGESW 304
>At1g21510.1 68414.m02690 hypothetical protein
Length = 323
Score = 30.3 bits (65), Expect = 0.98
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +1
Query: 358 NEYLEAT--ENKDYQRLRELTQKYSGNRPPTEPYNTPATFDTPNID--RPCTPATNNEDA 525
N++L A EN R+ L + S + T+P P+ FD+P I TP NED+
Sbjct: 116 NDFLRACYQENSHVARINSLREA-SLSMKTTKP-RYPSRFDSPVIPSRNSTTPNRANEDS 173
Query: 526 PRQTKNATKDKTADITDNH 582
R + N +K +T +++ NH
Sbjct: 174 KRGS-NCSK-RTRELSPNH 190
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 326 KSL*IIFAMPST*ASSSKTLLFFSDFCLGIFGTLNTVVSAFNSFMF-CNAASPGLIALPP 150
K + + PS+ +S+ + +FF+ +F N F++ AASPG + PP
Sbjct: 10 KPISTVVPRPSSAVASTSSFVFFNHKTNPLFRRKNLPKRLFSAVKIKAGAASPGKVGTPP 69
Query: 149 AD 144
A+
Sbjct: 70 AN 71
>At5g17320.1 68418.m02029 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
Roc1 (GI:1907210) [Oryza sativa]; contains Pfam
PF00046: Homeobox domain and Pfam PF01852: START domain
Length = 718
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 316 QRDFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSG---NRPPTEPY-NTPATFDTPN 483
+ D L+KL AQN YL+ +Y+R+ ++Y G + PY + P+ + +
Sbjct: 126 REDQLRHLQKLRAQNAYLK----DEYERVSNYLKQYGGHSMHNVEATPYLHGPSNHASTS 181
Query: 484 IDRPCTPATNNEDAP 528
+RP T++ P
Sbjct: 182 KNRPALYGTSSNRLP 196
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 370 EATENKDYQRLRELTQKYSGN 432
E TEN D+Q L ++T YSG+
Sbjct: 599 EKTENLDFQELAQMTDGYSGS 619
>At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1175
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -3
Query: 569 ISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYGSVGGLF 429
I A L V +CL + + G+ G S G + +A +LY + F
Sbjct: 124 IEAHLKAVKSILCLESEEARMVGILGPSGIGKTTIARILYSKLSSQF 170
>At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1229
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -3
Query: 569 ISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYGSVGGLF 429
I A L V +CL + + G+ G S G + +A +LY + F
Sbjct: 188 IEAHLKAVKSILCLESEEARMVGILGPSGIGKTTIARILYSKLSSQF 234
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Frame = +1
Query: 430 NRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKN-----ATKDKTADITDNH 582
N PP + N PA P + PA N + P Q N T KT TDNH
Sbjct: 167 NNPPAQKTNPPAQKTNPPAQKTNPPAQKN-NPPTQKNNPQKPVGTTQKTGR-TDNH 220
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Frame = +1
Query: 430 NRPPTEPYNTPATFDTPNIDRPCTPATNNEDAPRQTKN-----ATKDKTADITDNH 582
N PP + N PA P + PA N + P Q N T KT TDNH
Sbjct: 167 NNPPAQKTNPPAQKTNPPAQKTNPPAQKN-NPPTQKNNPQKPVGTTQKTGR-TDNH 220
>At2g40150.1 68415.m04938 expressed protein
Length = 424
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 269 LLFFSDFCLGIFGTLNTVVSAFNSFMFCNAASPGLIALPPADI-LYNVCCLFNN 111
++FFS F GIF + + S+ F N S + LPP + L+ +F+N
Sbjct: 29 VIFFSLFFFGIFMYNDNLKSSIADFTSSNPFSSSFVELPPDECDLFTGQWVFDN 82
>At4g16950.2 68417.m02557 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.; closest
homolog in Col-0 to RPP5 of clutivar Landsberg erecta.
Length = 1404
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -3
Query: 569 ISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYGSVGGLFPL 423
I A + + +CL + + G+ G+S G S + L+ + FPL
Sbjct: 191 IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPL 239
>At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.; closest
homolog in Col-0 to RPP5 of clutivar Landsberg erecta.
Length = 1449
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -3
Query: 569 ISAVLSLVAFFVCLGASSLLVAGVHGRSMFGVSKVAGVLYGSVGGLFPL 423
I A + + +CL + + G+ G+S G S + L+ + FPL
Sbjct: 191 IEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLSIQFPL 239
>At5g56660.1 68418.m07073 IAA-amino acid hydrolase 2 (ILL2)
identical to IAA-amino acid hydrolase homolog 2
precursor [Arabidopsis thaliana] SWISS-PROT:P54970
Length = 439
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 475 TPNIDRPCTPATNNEDAPRQTKNATKD 555
TPN P P NN+D +Q K +D
Sbjct: 325 TPNGREPMPPTVNNKDLYKQFKKVVRD 351
>At4g23520.1 68417.m03390 cysteine proteinase, putative contains
similarity to cysteine proteinase (thiol protease) RD21A
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 356
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 534 LSGSILIVGSRSARPVNVWRVKSGWGVIW 448
L +++IVG S + W V++ WG W
Sbjct: 292 LDHALVIVGYGSENGQDYWIVRNSWGTTW 320
>At3g18600.1 68416.m02364 DEAD/DEAH box helicase, putative
non-consensus acceptor splice site AT at exon 2; similar
to DEAD box helicase protein GB:NP_006764 from [Homo
sapiens], contains Pfam profile: PF00270 DEAD/DEAH box
helicase
Length = 568
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 124 ACLIMCVYKNY-LNKLQKDIFRAF 56
+ L CV K+Y LNKL KD +RA+
Sbjct: 472 SALEKCVAKDYNLNKLAKDAYRAY 495
>At2g46020.2 68415.m05725 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2193
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 343 KLNAQNEYLEATENKDYQRLRELTQKYSGNRP--PTEPYNTPATFDTPNID 489
K + +N+ +EA +N D +R RE+ + N P E Y ++F T D
Sbjct: 837 KDDGRNKRMEALKNNDVERYREMLLEQQTNMPGDAAERYAVLSSFLTQTED 887
>At2g46020.1 68415.m05724 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2192
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 343 KLNAQNEYLEATENKDYQRLRELTQKYSGNRP--PTEPYNTPATFDTPNID 489
K + +N+ +EA +N D +R RE+ + N P E Y ++F T D
Sbjct: 837 KDDGRNKRMEALKNNDVERYREMLLEQQTNMPGDAAERYAVLSSFLTQTED 887
>At2g41180.1 68415.m05086 sigA-binding protein-related low
similarity to SigA binding protein [Arabidopsis
thaliana] GI:6980074; contains Pfam domain PF05678: VQ
motif
Length = 141
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 397 RLRELTQKYSGNRPPTEPYNTPATFDTPNIDRPCTPATNNE 519
+ REL Q+ +G P +P TF ++ RPC N E
Sbjct: 54 KFRELVQELTGQDAADLP-PSPTTFTAVDLHRPCESEMNLE 93
>At2g30320.1 68415.m03690 tRNA pseudouridine synthase family protein
similar to pseudouridine synthase [Schizosaccharomyces
pombe] GI:6469502; contains Pfam profile PF01416: tRNA
pseudouridine synthase
Length = 510
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 322 DFFPDLEKLNAQNEYLEATENKDYQRLRELTQKYSGNRPPTEPYNTPAT 468
DF L++ + + T+ Y+R E K RPP EP + A+
Sbjct: 216 DFNEILKEFEGEYPFHNYTQRSRYRRKSEQKIKQRNGRPPREPKSIKAS 264
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,476,535
Number of Sequences: 28952
Number of extensions: 225797
Number of successful extensions: 727
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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