Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p14
(667 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 270 7e-73
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 8e-12
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 65 6e-11
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 52 3e-07
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 46 3e-05
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.068
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 34 0.090
SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 32 0.37
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 32 0.48
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 30 1.5
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 30 1.9
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 29 2.6
SB_30566| Best HMM Match : zf-C4_Topoisom (HMM E-Value=0.38) 29 2.6
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 3.4
SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 3.4
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2) 29 4.5
SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_41890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 28 5.9
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 28 5.9
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 28 5.9
SB_46136| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14) 28 7.9
SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0) 28 7.9
SB_29265| Best HMM Match : OmpH (HMM E-Value=3) 28 7.9
SB_4879| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 270 bits (662), Expect = 7e-73
Identities = 145/188 (77%), Positives = 153/188 (81%), Gaps = 1/188 (0%)
Frame = +1
Query: 85 MATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQND 264
MA TLEDK+IW DGEE + EEVLRM TDEIVSR RLLDNEI
Sbjct: 1 MAATLEDKAIWGDGEE-MGEEVLRMSTDEIVSRARLLDNEI------------------- 40
Query: 265 KIKENTEKIKVNKTLPYLVSNVIELLDVDPQE-EEEDGAVVDLDSQRKGKCAVIKTSTRQ 441
KEN+EKIKVNKTLPYLVSNVIELLDVDPQ+ EEDGA VDLDSQRKGKCAVIKTSTRQ
Sbjct: 41 --KENSEKIKVNKTLPYLVSNVIELLDVDPQDYAEEDGANVDLDSQRKGKCAVIKTSTRQ 98
Query: 442 TYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGG 621
TYFLPVIGLV+ E L PGDLVGVNKDSYLILE LPAEYD+RVKAMEVDERPTEQYSDIGG
Sbjct: 99 TYFLPVIGLVEPENLTPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGG 158
Query: 622 LDKQIXEL 645
LD+QI E+
Sbjct: 159 LDQQIQEM 166
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 67.7 bits (158), Expect = 8e-12
Identities = 43/152 (28%), Positives = 77/152 (50%)
Frame = +1
Query: 211 IMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDL 390
+M+ E ++ L+ Q +K +E K+ + P V N+ E++D
Sbjct: 268 LMEEEFIQNQERLKPQEEKHEEERSKVDDLRGTPMSVGNLEEIID--------------- 312
Query: 391 DSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVK 570
D+ A++ TS +++ ++ VD + L+PG V +N + ++ L + D V
Sbjct: 313 DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDADPMVT 367
Query: 571 AMEVDERPTEQYSDIGGLDKQIXELIEAVVLP 666
M++++ P E Y+DIGGLD QI E+ E+V LP
Sbjct: 368 VMKLEKAPQESYADIGGLDTQIQEIKESVELP 399
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/83 (33%), Positives = 51/83 (61%)
Frame = +1
Query: 418 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 597
++ ++T Y++ ++ +D E LKP V ++K S +++ LP E D+ + + +E+P
Sbjct: 101 IVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIAMLTNEEKPN 160
Query: 598 EQYSDIGGLDKQIXELIEAVVLP 666
Y++IGG+D Q E+ EAV LP
Sbjct: 161 VSYAEIGGMDIQKQEIREAVELP 183
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +1
Query: 418 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 597
++K + Y + VD KLK G V ++ + I+ LP E D V M ++
Sbjct: 72 IVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGN 131
Query: 598 EQYSDIGGLDKQIXELIEAVVLP 666
YSD+GGL +QI EL E + LP
Sbjct: 132 ISYSDVGGLSEQIRELREVIELP 154
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +1
Query: 508 VNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIXELIEAVVLP 666
V+++ Y I LP + D V M+V+E+P YSDIGG +QI +L E V P
Sbjct: 51 VDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETP 103
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 42.3 bits (95), Expect = 3e-04
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Frame = +1
Query: 388 LDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD----LVGVNKDSYLILETLP--- 546
L++QR A ++ + L G E +KP D LV V+ + +++
Sbjct: 96 LEAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKGID 155
Query: 547 -AEYDARVKAMEVDERPTEQYSDIGGLDKQIXELIEAVVLP 666
AE D V M V++ P Y +GGLDKQI E+ E + LP
Sbjct: 156 MAEVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELP 196
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 35.9 bits (79), Expect = 0.030
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Frame = +1
Query: 61 EKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKI--MKSEVMR 234
+K+ I + L D W+D +L EV ++ D+ + +++D+E ++ ++S + +
Sbjct: 2590 DKSTATIHLEVELSD---WKDQASSLQSEVAQLKKDKAAAMHKVIDSEEQMIQLRSRLYK 2646
Query: 235 ISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKC 414
L D +K + K N L + + L V E ++ +VD + + K KC
Sbjct: 2647 TEDSLVRNQDTVKLLS---KENTDLRVEIERLRSRLSVYASETAKE--IVDGNGEGKAKC 2701
Query: 415 AVIKTSTR 438
V+ T T+
Sbjct: 2702 GVV-TKTK 2708
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/84 (23%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 166 DEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNK-TLPYLVSNVIELL 342
+ + S R +NEI +K+ + R+ EL++ +++ ++EKI ++ + L ++ +
Sbjct: 105 ESVTSELRGRENEIAELKTSIGRLESELRSLKSELQNSSEKISEDEHEISQLKNDKARCM 164
Query: 343 -DVDPQEEEEDGAVVDLDSQRKGK 411
++ + E+ + VVDL RK +
Sbjct: 165 QELRDEREKSNKLVVDLQKTRKAQ 188
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 34.3 bits (75), Expect = 0.090
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +1
Query: 103 DKSIWEDGEEALSEEVLRMPT--DEIVSRTRLLDNEIKIMKSE--VMRISHELQAQNDKI 270
D+ WE+ ++ L M T DE + + E K E + + ++ AQ +I
Sbjct: 391 DREEWEEEQKRLDRAWYDMDTGYDETQNPFADVSEEYTKKKEEKLIKKAVKKMSAQQRQI 450
Query: 271 KENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDL 390
++ + + N+ L S V++ LDVD EEE+ A V L
Sbjct: 451 NKDNDMWETNRML---TSGVVQKLDVDEDFEEENEAKVHL 487
>SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 748
Score = 33.1 bits (72), Expect = 0.21
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Frame = +1
Query: 70 NHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHEL 249
N NIT E I +DG+E E++ PT + +L DN ++ E +L
Sbjct: 585 NMNITFKAHREVNRIEQDGQEVQEEQLEDNPTVPLGQEEQLEDNPTVPLEQE-----EQL 639
Query: 250 QAQNDKIKENTEKIKVNKTLPYLVSNVIE---LLDVDPQEEEEDGAVVDLDSQRK 405
+ E ++++ N T+P +E + ++ +E+ ED V L+ + +
Sbjct: 640 EDNPTVPLEQEQQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQ 694
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 223 EVMRISHELQAQNDKIKENTEKIK-VNKTLPYLVSNVIELLD 345
E+ + +EL+ Q + IKEN EK+K K + L +IEL D
Sbjct: 612 EITELENELEEQREIIKENEEKLKEKEKEIEKLKKKIIELSD 653
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 193 LDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVI---ELLDVDPQ 357
++NE K+ ++ V ++H+L + D E E I++ PY + +V+ EL+ V P+
Sbjct: 191 VENEEKVYEALVRWVNHDLSQRRDLFPELLELIRLPLVSPYYLVDVVEKEELMTVSPR 248
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 31.9 bits (69), Expect = 0.48
Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +1
Query: 97 LEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE 276
+ ++ + E+ E EE +++ + + E+++M + + HE + +++IKE
Sbjct: 2909 ISEEELLEEVEVQRVEEGASHDLEDVPALKESYEEEVEVM---AVGLKHEERVNDEEIKE 2965
Query: 277 NTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDL--DSQRKGK 411
EKI +++ N+I+ L+ +EE E AV + +R+GK
Sbjct: 2966 KDEKIHLDE------ENIIQDLEETFEEELEVSAVETSKNEDERRGK 3006
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 118 EDGEEALSEEVL--RMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKI 291
EDG E L E++ R E+ R + L+ E +++ +V + ++ + KIK+ EK+
Sbjct: 408 EDGTE-LEEKIRSQRNRITELERRVKELEKEKNLLEQQVKTMKNKSDDDDKKIKDLNEKV 466
Query: 292 KVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRK 405
+V + L N E+ + E + + DL + K
Sbjct: 467 RVLE--KQLKENDAEIQGLKDDNERLEDELEDLSTTIK 502
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 166 DEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLD 345
DE++ + L ++ ++ EV ++ EL+ + ++TEK+ N + ++EL
Sbjct: 716 DELMKQNESLRKKVSKLEDEVRFLNDELREADSSSIKDTEKL--NAEIREFKKKIVELEK 773
Query: 346 -VDPQEEE 366
VD QEEE
Sbjct: 774 LVDDQEEE 781
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Frame = +1
Query: 142 EEVLRMPTDEIVSR---TRLLDNEIKIMKSEVMRISHELQAQND------KIKENTEKIK 294
EE LR +E+ R LDNE+ ++++ +L+ D ++ E E+ K
Sbjct: 909 EEKLRRTEEELKDRDGQVAKLDNELTKLQNDFQDTITQLKTLEDLLDTSKRVVEEKEQ-K 967
Query: 295 VNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 441
V + L +V EL D +E+DG + +LD K IK Q
Sbjct: 968 VTELDKLLNESVDELQQKDKSLKEKDGKLAELDQALKESRKEIKNREAQ 1016
>SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Frame = +1
Query: 238 SHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVV-DLDSQRKGKC 414
S + + K +E++E + + + ++ E + + +EEEED ++ D D K
Sbjct: 363 SEDEEKPEHKPREDSEDVTSRTSSDFTLATESEEEEEEEEEEEEDDELIGDPDVLEALKT 422
Query: 415 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 594
A R+ L ++ DA+ + D + +D ++ ++P Y+ K + ++ P
Sbjct: 423 A----KARENEDLLLLA-ADADGNEESDYT-ITEDEGSVVSSIPTFYEGEQKLEDDEDEP 476
Query: 595 TEQYSDIGGLDKQIXE 642
T + S LD+Q E
Sbjct: 477 TSRTST--ALDEQPSE 490
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 265 KIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQR 402
K+K ++ + NKT + N +E D +P+E EED V D++R
Sbjct: 510 KLKSKMKRSEKNKTEELVAVNKVETDDDNPEETEEDSGNVS-DTER 554
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 30.3 bits (65), Expect = 1.5
Identities = 45/199 (22%), Positives = 80/199 (40%), Gaps = 9/199 (4%)
Frame = +1
Query: 37 LLNLKDYYEKTNHN-ITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKI 213
L+NL+ K + T LE + E L++ L M + + L+N ++
Sbjct: 791 LVNLQSLQNKLERSEFETRTRLEGQVEALQKESNLAKRQLEMDNTHHKNLIKTLENRVQE 850
Query: 214 MKSEVMRISHELQAQNDKIKENTEKI--------KVNKTLPYLVSNVIELLDVDPQEEEE 369
+++++ S Q D + NT+++ +V L V ELL +P ++
Sbjct: 851 LQTQIDTESRSNQQARDMLVRNTKEMERLEFKNTEVKAQLEAAEKRVHELLSKEPSSDQ- 909
Query: 370 DGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPA 549
D+D RK KT + T + L DAE K DL + + L E +
Sbjct: 910 -----DIDKMRKETEEKFKTDLQDT----ELKLKDAE-AKIKDLETQLEQAKLHAEQFKS 959
Query: 550 EYDARVKAMEVDERPTEQY 606
A +A+ + TE++
Sbjct: 960 MSGANDEALREVNKSTEEF 978
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 580 VDERPTEQYSDIGGLDKQIXELIEAVVLP 666
V E+P ++SDI GL+ L EAV+LP
Sbjct: 88 VMEKPNVKWSDIAGLESAKEALKEAVILP 116
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +1
Query: 28 VQELLNLKDYYEKTNHNIT--MATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDN 201
++E L + +E T +++ +AT ++ K + EAL L+ ++ + L
Sbjct: 185 LEEQLKAETQHESTLRDLSSQLATAVQQK----EELEALRARELKANREDYQKKCESLMV 240
Query: 202 EIKIMKSEVMRISHELQAQNDKIKENTEKIK 294
EI+ +KSEV +++ LQ Q D+++ + +K
Sbjct: 241 EIESLKSEVQQLNSRLQNQ-DELETERKTLK 270
>SB_30566| Best HMM Match : zf-C4_Topoisom (HMM E-Value=0.38)
Length = 597
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 550 EYDARVKAMEVDERPTEQYSDIGGL---DKQ-IXELIEAVV 660
EYD R+KA E +QY D+ L DKQ I L EAVV
Sbjct: 523 EYDKRIKAFEESGDKPQQYVDLTRLRCDDKQTIVALAEAVV 563
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Frame = +1
Query: 40 LNLKDYYEKTNHNITM-----ATTLEDKSIWED---GEEALSE---EVLRM---PTDEIV 177
LN KDY ++ N T+ LE+K + G + ++E E+ +M PT+ +
Sbjct: 1593 LNNKDYIQQRTDNQTLRQENETVLLENKDLKAQIAAGLKKMAEYEREITKMGQRPTEVVK 1652
Query: 178 SRTRLLDNEIKIMKSEVMRISHELQAQNDKIKEN 279
R R D+EI+ E+ + EL+ Q ++EN
Sbjct: 1653 RRGRRGDSEIQRENIELQKRIAELEIQRKSVEEN 1686
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 49 KDYYEKTNHNITMATTLEDKS--IWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKS 222
+D YEK N + M +++ I + A + +L+ +E + + EIK ++S
Sbjct: 1193 EDLYEKENEVVVMKKRVKEFELLISNSNDSAAKDSLLKTVKNE----NEIQEKEIKKLRS 1248
Query: 223 EVMRISHELQAQNDK 267
EV+ + E K
Sbjct: 1249 EVLELQREASGAQGK 1263
>SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 127 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEK 288
+ A+ E++ D VS R+ +NE+++ KSE + +Q K + E+
Sbjct: 121 QTAIQLEIVNFNDDSFVSGNRMSNNEVRVTKSESLSSPSNSYSQAFKSNNSREE 174
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 94 TLEDKSIWED---GEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQND 264
+LE+K +D E S E DE+V R L +E+K +K E + ++++ N
Sbjct: 682 SLEEKIRLKDVVIDELKTSLETCSKERDELVESNRNLGSELKALKKENEELVSQVESLNQ 741
Query: 265 KIKE 276
K+++
Sbjct: 742 KVEQ 745
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +1
Query: 49 KDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEV 228
K+ +KT N T E+K ++ ++ E + T E +T+ ++ K K +
Sbjct: 458 KENKDKTKEN--KDKTKENKDKTKENKDKTKEN--KDKTKENKDKTKNNKDKTKENKDKT 513
Query: 229 MRISHELQAQNDKIKENTEKIKVNKT 306
+ + DK KEN K K NKT
Sbjct: 514 NENKDKTKENKDKTKENKNKTKENKT 539
>SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +1
Query: 334 ELLDVDPQEEEEDGAVVD 387
+++D+ PQ+EEEDG V++
Sbjct: 527 DIVDLQPQDEEEDGEVIE 544
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 502 VGVN-KDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIXELIEAVVLP 666
V +N KD L+ L A + + A ++ P + D+GGLD E+++ + LP
Sbjct: 779 VSINFKDFQEALDALQASHADAIGAPKI---PDISWKDVGGLDSVKEEILDTIQLP 831
>SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2)
Length = 1106
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +1
Query: 334 ELLDVDPQEEEEDGAVVD 387
+++D+ PQ+EEEDG V++
Sbjct: 982 DIVDLQPQDEEEDGEVIE 999
>SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +1
Query: 334 ELLDVDPQEEEEDGAVVD 387
+++D+ PQ+EEEDG V++
Sbjct: 22 DIVDLQPQDEEEDGEVIE 39
>SB_41890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 196 DNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIE 336
D +K + SE ++ EL Q DKI KIK+ P + ++IE
Sbjct: 104 DQPMKKLGSEFETVTGELLTQLDKISRGVRKIKLVSGDPRDIQSLIE 150
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +1
Query: 106 KSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTE 285
KS+ + G+ + DE+ R L+ E+K +KSE + Q N ++
Sbjct: 224 KSLKKGGDLLFPGASYKRKLDEVAGRLDELEREVKRLKSETCQTKMTCQPCNHQLLMVGP 283
Query: 286 KIKVNKTLP 312
+ + TLP
Sbjct: 284 TVPIPPTLP 292
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/96 (23%), Positives = 44/96 (45%)
Frame = +1
Query: 1 DFRVVKCVWVQELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVS 180
D +K + +EL L + Y + + K E+ E+A++E+ R+ S
Sbjct: 724 DMESIKVLHARELEKLSETYAGDRSRLLQ----DQKEATENHEQAMTEQRQRLE-----S 774
Query: 181 RTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEK 288
+ L E MKS V ++ +++ Q +K+K E+
Sbjct: 775 QIEKLKEENGQMKSTVSGLASDVEMQRNKVKTLREQ 810
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 118 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKI 270
++ E L + LR E S+ + LD+E+ + + ++ HELQ + +I
Sbjct: 910 QEAEFELKLDDLRADIQERDSQIKELDSEMAEVTENIAKLQHELQGKGQEI 960
>SB_46136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 157 MPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTEKIKVNKTLPYLVSNVI 333
M TD+ L+ ++ M SE++R+ + A++DK ++ E I+ L+ ++
Sbjct: 76 METDQANQSVSDLEGIVQSMGSEILRLQSLVSAEDDKMLRYKVENIRRKHNYIPLIMEML 135
Query: 334 ELL 342
+LL
Sbjct: 136 KLL 138
>SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 112 IWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHEL 249
I E +E ++ R+ EI+S+T +L ++IK + VMRI E+
Sbjct: 196 IIEGKKEFKLADLGRVTLKEIISKTSVLVSDIKGSRESVMRIPMEI 241
>SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14)
Length = 961
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 163 TDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 300
T+++V + +EI I E ++ HE++ + +I TEK+ V+
Sbjct: 376 TNKVVHEVKGKVSEISIKTDETNKVVHEVKGKVSEISIKTEKMAVD 421
>SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0)
Length = 768
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 274 ENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 378
E ++ + ++T P N +E V P+ EEEDGA
Sbjct: 56 EGEKEDEASETSPRGSENSVESRSVSPKNEEEDGA 90
>SB_29265| Best HMM Match : OmpH (HMM E-Value=3)
Length = 218
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +1
Query: 337 LLDVDPQEEE--EDGAVVDLDSQ--RKGKCAVIKTSTRQTYFLPVIGLVD 474
L D D E E +D VD++++ KGK K+S + Y PV+ L D
Sbjct: 25 LCDTDAPEAEVVDDEPEVDVETETEEKGKAETKKSSEPEEYTPPVVALED 74
>SB_4879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 43 NLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLR 156
N + YE N + M + L+D E GEE EEV R
Sbjct: 391 NNNNNYESDNSDTNMISDLDDDDDDESGEEEEEEEVNR 428
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.133 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,214,887
Number of Sequences: 59808
Number of extensions: 321510
Number of successful extensions: 818
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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