Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p14
         (667 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    25   0.49 
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    25   0.49 
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    25   0.49 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   1.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   1.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   1.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.6  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
 Frame = +1

Query: 127 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMK---------SEVMRISHELQAQNDKIKEN 279
           +E+ + +   +  DEI+   RLL+N  K +          +E+ R+  +  A + K   +
Sbjct: 22  DESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKCTD 81

Query: 280 TEKIKVNKTLPYLVSNVIELLD 345
            ++  + K + +LV N  EL D
Sbjct: 82  KQREVIKKVIKFLVENKPELWD 103


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
 Frame = +1

Query: 127 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMK---------SEVMRISHELQAQNDKIKEN 279
           +E+ + +   +  DEI+   RLL+N  K +          +E+ R+  +  A + K   +
Sbjct: 22  DESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKCTD 81

Query: 280 TEKIKVNKTLPYLVSNVIELLD 345
            ++  + K + +LV N  EL D
Sbjct: 82  KQREVIKKVIKFLVENKPELWD 103


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
 Frame = +1

Query: 127 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMK---------SEVMRISHELQAQNDKIKEN 279
           +E+ + +   +  DEI+   RLL+N  K +          +E+ R+  +  A + K   +
Sbjct: 22  DESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATDCKKCTD 81

Query: 280 TEKIKVNKTLPYLVSNVIELLD 345
            ++  + K + +LV N  EL D
Sbjct: 82  KQREVIKKVIKFLVENKPELWD 103


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -3

Query: 512 LTPTKSPGLSFSASTKPMTGK 450
           L+   S GLS S STKP T K
Sbjct: 538 LSENLSSGLSISDSTKPETSK 558


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 412 CAVIKTSTRQTYFLPVIGLVDAEKLKPGDLV 504
           C V+  ST   Y + V+GL  A    P D++
Sbjct: 154 CVVLACSTATVYVMSVVGLSKAPAQIPVDVL 184


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 265 KIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDS 396
           +IK+  E ++ +     L + + + +  + +EEEE+   +DLDS
Sbjct: 291 EIKKEVEDMEYDDIKTELSTGMNDDIPPETEEEEENDKKLDLDS 334


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 226 VMRISHELQAQNDKIKENTEKIKVNKTLPYLVSN 327
           + R + E+ AQND+  +    +K+ + LP+ V +
Sbjct: 334 LQRQNLEMVAQNDRTLQMIAGMKIKEELPHFVGS 367


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +1

Query: 67  TNHNIT--MATTLEDKSIWEDGEEALSEEVLRMPT 165
           T HN    M T L +  IWE  +    +E+  +PT
Sbjct: 226 TRHNTKNGMKTLLSETDIWEVEQILAKKEIKGVPT 260


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.133    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,097
Number of Sequences: 438
Number of extensions: 2890
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)