Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p14
(667 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 258 2e-69
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 253 9e-68
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 69 4e-12
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 69 4e-12
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 66 1e-11
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 63 2e-10
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 62 4e-10
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 52 3e-07
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 52 5e-07
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 36 0.032
At2g12100.1 68415.m01300 Ulp1 protease family protein contains P... 34 0.098
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 32 0.30
At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast... 32 0.39
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 32 0.39
At5g27500.1 68418.m03287 hypothetical protein hypothetical prote... 31 0.52
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 31 0.91
At2g05180.1 68415.m00545 cytochrome P450 family protein similar ... 31 0.91
At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic... 30 1.2
At3g24350.1 68416.m03057 syntaxin, putative (SYP32) similar to S... 30 1.2
At5g46410.1 68418.m05712 NLI interacting factor (NIF) family pro... 30 1.6
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 30 1.6
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 30 1.6
At2g44180.1 68415.m05496 methionyl aminopeptidase, putative / me... 30 1.6
At2g30500.1 68415.m03715 kinase interacting family protein simil... 30 1.6
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 30 1.6
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 29 2.8
At3g53540.1 68416.m05912 expressed protein 29 2.8
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 2.8
At5g58320.2 68418.m07301 kinase interacting protein-related low ... 29 3.7
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 29 3.7
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 28 4.9
At1g33960.1 68414.m04209 avirulence-responsive protein / avirule... 28 4.9
At1g28020.1 68414.m03431 pentatricopeptide (PPR) repeat-containi... 28 4.9
At5g06850.1 68418.m00774 C2 domain-containing protein contains I... 28 6.4
At3g20950.1 68416.m02648 cytochrome P450 family protein similar ... 28 6.4
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 28 6.4
At2g43990.1 68415.m05470 expressed protein 28 6.4
At5g64330.1 68418.m08080 non-phototropic hypocotyl 3 (NPH3) iden... 27 8.5
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 27 8.5
At3g45580.1 68416.m04923 zinc finger (C3HC4-type RING finger) fa... 27 8.5
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 27 8.5
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 27 8.5
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 258 bits (632), Expect = 2e-69
Identities = 119/184 (64%), Positives = 152/184 (82%), Gaps = 1/184 (0%)
Frame = +1
Query: 118 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 297
ED +++ M T++I TRLLDNEI+I+K + R + E + +KIKEN EKIK+
Sbjct: 7 EDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKL 66
Query: 298 NKTLPYLVSNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVD 474
NK LPYLV N++E+L+++P+++ EEDGA +DLDSQRKGKC V+KTSTRQT FLPV+GLVD
Sbjct: 67 NKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVD 126
Query: 475 AEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIXELIEA 654
+ LKPGDLVGVNKDSYLIL+TLP+EYD+RVKAMEVDE+PTE Y+DIGGL+KQI EL+EA
Sbjct: 127 PDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEA 186
Query: 655 VVLP 666
+VLP
Sbjct: 187 IVLP 190
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 253 bits (619), Expect = 9e-68
Identities = 117/176 (66%), Positives = 150/176 (85%), Gaps = 1/176 (0%)
Frame = +1
Query: 142 EEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLV 321
+++ M TD+I +RLL NEI+I+K E R + +L++ +KIKEN EKIK+NK LPYLV
Sbjct: 14 DQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPYLV 73
Query: 322 SNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 498
N++E+L++ P+++ EEDGA +DLDSQRKGKC V+KTSTRQT FLPV+GLVD + LKPGD
Sbjct: 74 GNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGD 133
Query: 499 LVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIXELIEAVVLP 666
LVGVNKDSYLIL+TLP+EYD+RVKAMEVDE+PTE Y+DIGGL+KQI EL+EA+VLP
Sbjct: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLP 189
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 68.5 bits (160), Expect = 4e-12
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 6/181 (3%)
Frame = +1
Query: 142 EEVLRMPT--DEIVSRTRLLDNE-IK---IMKSEVMRISHELQAQNDKIKENTEKIKVNK 303
E R+PT + RLL E IK +M+ E + L+ Q +K +E+ K+ +
Sbjct: 47 EAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLR 106
Query: 304 TLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEK 483
P V N+ EL+D + A++ +S Y++ ++ VD ++
Sbjct: 107 GTPMSVGNLEELIDENH--------------------AIVSSSVGPEYYVGILSFVDKDQ 146
Query: 484 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIXELIEAVVL 663
L+PG + ++ ++ L E D V M+V++ P E Y+DIGGL+ QI E+ EAV L
Sbjct: 147 LEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVEL 206
Query: 664 P 666
P
Sbjct: 207 P 207
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 68.5 bits (160), Expect = 4e-12
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 6/181 (3%)
Frame = +1
Query: 142 EEVLRMPT--DEIVSRTRLLDNE-IK---IMKSEVMRISHELQAQNDKIKENTEKIKVNK 303
E R+PT + RLL E IK +M+ E + L+ Q +K +E+ K+ +
Sbjct: 47 EAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLR 106
Query: 304 TLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEK 483
P V N+ EL+D + A++ +S Y++ ++ VD ++
Sbjct: 107 GTPMSVGNLEELIDENH--------------------AIVSSSVGPEYYVGILSFVDKDQ 146
Query: 484 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIXELIEAVVL 663
L+PG + ++ ++ L E D V M+V++ P E Y+DIGGL+ QI E+ EAV L
Sbjct: 147 LEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVEL 206
Query: 664 P 666
P
Sbjct: 207 P 207
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 66.5 bits (155), Expect = 1e-11
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Frame = +1
Query: 214 MKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLD 393
+K ++ HELQ Q + N +++ + +++ + +L + Q +E G+ V
Sbjct: 32 LKQYYLQHIHELQRQLRQKTNNLNRLEAQRNE---LNSRVRMLREELQLLQEPGSYVGEV 88
Query: 394 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVK 570
+ GK V +K Y + + +D K+ P V + DSY++ LP++ D V
Sbjct: 89 VKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVN 148
Query: 571 AMEVDERPTEQYSDIGGLDKQIXELIEAVVLP 666
M+V++ P Y IGGLD+QI E+ E + LP
Sbjct: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/98 (30%), Positives = 55/98 (56%)
Frame = +1
Query: 373 GAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAE 552
G +++ Q G ++ ++T Y++ ++ ++ E LKP V +++ S +++ LP E
Sbjct: 80 GQFMEMVDQNNG---IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPE 136
Query: 553 YDARVKAMEVDERPTEQYSDIGGLDKQIXELIEAVVLP 666
D+ + + E+P Y+DIGG D Q E+ EAV LP
Sbjct: 137 ADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELP 174
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Frame = +1
Query: 331 IELLDVDPQEEEEDGAVVDLDSQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVG 507
+ +L + Q +E G+ V + GK V +K Y + + +D KL P V
Sbjct: 68 VRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVA 127
Query: 508 VNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIXELIEAVVLP 666
+ DSY++ LP++ D V M+V++ P Y IGGLD+QI E+ E + LP
Sbjct: 128 LRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +1
Query: 457 VIGLVDAEK---LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLD 627
V+GL D ++ G VGV++ Y I LP + D V M V+E+P YSDIGG
Sbjct: 152 VVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCK 211
Query: 628 KQIXELIEAVVLP 666
+QI ++ E V LP
Sbjct: 212 EQIEKIREVVELP 224
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +1
Query: 457 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGG 621
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
Query: 622 LDKQIXELIEAVVLP 666
+QI ++ E V LP
Sbjct: 173 CKEQIEKMREVVELP 187
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 35.5 bits (78), Expect = 0.032
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 199 NEIKIMKSEVMRISHELQAQNDKIKENTEKI-KVNKTLPYLVSNVIELLDVDPQEEEEDG 375
NE++I+K E + EL+ + DK+ E + K K L LV + + ++D E+E G
Sbjct: 267 NEMEIVKIEQKGVIEELERKLDKLNETVRSLTKEEKVLRDLVIGLEK--NLDESMEKESG 324
Query: 376 AVVDLDSQRKGKCAVIKTS 432
+V++D+ GK IK S
Sbjct: 325 MMVEIDA--LGKERTIKES 341
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/71 (26%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +1
Query: 103 DKSIWEDGE--EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE 276
DK++ E+ E L EVL+ ++++V++T ++KI + + ++L++Q++ +K
Sbjct: 445 DKALDEEKRNGEDLKAEVLK--SEKMVAKTLEELEKVKIERKSLFSAKNDLESQSESLK- 501
Query: 277 NTEKIKVNKTL 309
+E +K+ K L
Sbjct: 502 -SENVKLEKEL 511
>At2g12100.1 68415.m01300 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28270, At2g05450,
At1g45090, At2g16180, At2g06750
Length = 1224
Score = 33.9 bits (74), Expect = 0.098
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +1
Query: 106 KSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHEL-QAQNDKIKENT 282
++I +GEEAL E+ DE + T L + + S + +S L Q ++D + EN
Sbjct: 775 ETICGEGEEALKEDKSPTVVDEALEDTALPEANLSDPSSPTVVVSKVLTQLKDDILAENV 834
Query: 283 EKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTY 447
KI +P V+ L D EE+ V + I STR+ Y
Sbjct: 835 SKIPEKVAVP---EEVLTQLKDDVLEEKVSEKVAIPEEVSILSRVPINISTRRAY 886
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 32.3 bits (70), Expect = 0.30
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +1
Query: 481 KLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIXELIEAVV 660
K KP D G KD + ++ A + + V E+P ++SD+ GL+ L EAV+
Sbjct: 93 KTKPKDGEGGGKDGE---DPEQSKLRAGLNSAIVREKPNIKWSDVAGLESAKQALQEAVI 149
Query: 661 LP 666
LP
Sbjct: 150 LP 151
>At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast /
transaminase A (ASP3) (YLS4) identical to SP|P46644
Aspartate aminotransferase, chloroplast precursor (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana};
identical to cDNA YLS4 mRNA for aspartate
aminotransferase (ASP3), partial cds GI:13122285
Length = 449
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 367 EDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 513
E+G + L+ RK + +I TR +LP++GLV+ KL ++G +
Sbjct: 86 EEGKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLVEFNKLSAKLILGAD 134
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/92 (22%), Positives = 45/92 (48%)
Frame = +1
Query: 127 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 306
++ ++ +R E + + + ++K+M + + + E QA + +I E +EK+K K
Sbjct: 218 DKVIANAAMRAKIKESMGQKDDIQGQVKLMGAGLDGVKKERQAISARINELSEKLKATKD 277
Query: 307 LPYLVSNVIELLDVDPQEEEEDGAVVDLDSQR 402
++ N EL V + ++ + DL QR
Sbjct: 278 EITVLEN--ELKTVSEKRDKAYSNIHDLRRQR 307
>At5g27500.1 68418.m03287 hypothetical protein hypothetical proteins
- Arabidopsis thaliana
Length = 187
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 103 DKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENT 282
D S W++ ++ + + V ++++ ++ NEI +SEV I +EL A ++KE+
Sbjct: 47 DPSSWKNKKDWVEDAVYE-EVEDVLPNLGIMANEIVKARSEVNEIVNELSASIQELKEDA 105
Query: 283 --EKIKVNK 303
K+++ K
Sbjct: 106 MCSKMEIRK 114
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 343 DVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDA 477
D + +EEEE+ VV++ ++KGK + +ST F + A
Sbjct: 279 DEEEEEEEEEEVVVEVKKKKKGKAKIEHSSTAPPEFRRAVAKTSA 323
>At2g05180.1 68415.m00545 cytochrome P450 family protein similar to
Cytochrome P450 93A1 (SP:Q42798) {Glycine max}
Length = 442
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 31 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVLRMP 162
QE +K +Y EKT I + D WED +E E LR P
Sbjct: 384 QERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAP 429
>At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic
isozyme 1 / transaminase A (ASP2) identical to SP|P46645
Aspartate aminotransferase, cytoplasmic isozyme 1 (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana}
Length = 405
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 367 EDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILET 540
E+G + LD RK + ++ +R ++P++G+ D KL ++G DS I E+
Sbjct: 42 EEGKPLVLDVVRKAEQQLVNDPSRVKEYIPIVGISDFNKLSAKLILGA--DSPAITES 97
>At3g24350.1 68416.m03057 syntaxin, putative (SYP32) similar to
SP|Q9FFK1 Syntaxin 31 (AtSYP31) (AtSED5) {Arabidopsis
thaliana}, syntaxin 5A GB:NP_003155 from [Homo sapiens]
(J. Mol. Neurosci. (1997) 8 (2), 159-161)
Length = 347
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/88 (21%), Positives = 43/88 (48%)
Frame = +1
Query: 31 QELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIK 210
++L+N ++ ++ +H I +A + + + + A V PT EI T ++ EI
Sbjct: 50 EDLINKSEFNKRASH-IGLAINQTSQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEIS 108
Query: 211 IMKSEVMRISHELQAQNDKIKENTEKIK 294
+ S ++ + +QND+ + ++ K
Sbjct: 109 ALNSALVDLQLFRSSQNDEGNNSRDRDK 136
>At5g46410.1 68418.m05712 NLI interacting factor (NIF) family
protein contains Pfam profile PF03031: NLI interacting
factor
Length = 453
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 253 AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQ 399
A D IK +T+KI ++ +L N +V+P + E D D Q
Sbjct: 206 ANKDDIKSDTDKINLDNHDLFLAFNRTRSYNVEPDDRAESEVAEDFDPQ 254
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +1
Query: 199 NEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 378
N+I IM S++ R L+A D+ K EK+ ++ + ++SN + + D +EE G
Sbjct: 577 NKIIIMISDLDRRVESLEAFKDEQKAKEEKVHIDNCV--ILSNTMITRNQDEMNQEEAGD 634
Query: 379 VVDLDSQ 399
+ D +
Sbjct: 635 SREKDQE 641
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 29.9 bits (64), Expect = 1.6
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Frame = +1
Query: 379 VVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLV----GVNKDSYLILETLP 546
++ LD +G I + + YFL ++ GDL G+ + ++ET P
Sbjct: 121 ILPLDDTIEGVSGNIFDAYLKPYFLEAY-----RPVRKGDLFLVRGGMRSIEFKVIETDP 175
Query: 547 AEYDARVKAMEV----------DERPTEQ--YSDIGGLDKQIXELIEAVVLP 666
AEY E+ DE ++ Y D+GG+ KQ+ ++ E V LP
Sbjct: 176 AEYCVVAPDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELP 227
>At2g44180.1 68415.m05496 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to SP|P50579 Methionine aminopeptidase
2 (EC 3.4.11.18) (MetAP 2) {Homo sapiens}; contains Pfam
profile PF00557: metallopeptidase family M24
Length = 441
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Frame = +1
Query: 271 KENTEKIKVNKTLPYLVSNVIELLDV--------DPQEEEEDGAVVDLDS---QRKGKCA 417
KENTE N L S++ + LD+ D +EEEDG + + ++K K
Sbjct: 13 KENTEAESSNGNESQLSSDLTKSLDLAEVKEDEKDNNQEEEDGLKAEASTKKKKKKSKSK 72
Query: 418 VIKTSTRQT--YFLPVIGLVDAEKLKPGDLVGVNKDS 522
K+S +QT +PV+ L + G++ N D+
Sbjct: 73 KKKSSLQQTDPPSIPVLELFPSGDFPQGEIQQYNDDN 109
>At2g30500.1 68415.m03715 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 517
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/103 (20%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +1
Query: 118 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 297
EDG+EAL + + + ++ +LL + + + + H++ ++KE EK+++
Sbjct: 156 EDGDEALIRRMAELELELQETKQKLLLQQESVDGDNNVDLLHKITTYEGELKEANEKMRM 215
Query: 298 NK-TLPYLVSNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAV 420
++ + L + + + D ++ + VDLD + + AV
Sbjct: 216 HEDEIANLKNQLQSFMSFDTEDHLGAEQKSVDLDKEDTKEDAV 258
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/78 (23%), Positives = 32/78 (41%)
Frame = +1
Query: 226 VMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRK 405
V + +L+ K+K E +K++K + +EL+ P E ++ S +
Sbjct: 42 VQNVDFDLEKNEIKVKGKIEVVKIHKQIEKWSKKKVELISPKPSEVKKTTTTTTTTSVVE 101
Query: 406 GKCAVIKTSTRQTYFLPV 459
K IK +T L V
Sbjct: 102 KKTTEIKKDVIRTTVLKV 119
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = +1
Query: 505 GVNKDSYLILETLPAEYDARVKAMEV----------DERPTEQ--YSDIGGLDKQIXELI 648
G+ + ++ET PAEY E+ DE ++ Y D+GG+ KQ+ ++
Sbjct: 161 GMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIR 220
Query: 649 EAVVLP 666
E V LP
Sbjct: 221 ELVELP 226
>At3g53540.1 68416.m05912 expressed protein
Length = 924
Score = 29.1 bits (62), Expect = 2.8
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +1
Query: 58 YEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRI 237
+ ++HNI MATT + S++ED E+ S + T + R L D + + + ++
Sbjct: 789 FSDSDHNIVMATTPVEPSLFEDLEKKYSS----VKTSTRLERKLLFDQISREVLHMLKQL 844
Query: 238 SH-ELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 369
S ++ K+ + K+ +TL LV+ E EE+E
Sbjct: 845 SDPHPWVKSTKVCPKWDANKIQETLRDLVTRKDEKPSKYDVEEKE 889
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Frame = +1
Query: 40 LNL-KDYYEK-----TNHNITMATTLEDKSIWEDGEEALSEEVLRMPT---DEIVSRTRL 192
LN+ K YEK + N ++A LE+ E G+ ++ V+ +E R ++
Sbjct: 1464 LNMTKRKYEKEKDELSKQNQSLAKQLEEAK-EEAGKRTTTDAVVEQSVKEREEKEKRIQI 1522
Query: 193 LDNEIKIMKSEVMRISHELQAQNDKI-KENTEKIKVNK 303
LD + +K EV + + +L+ +++++ KE +E+ V K
Sbjct: 1523 LDKYVHQLKDEVRKKTEDLKKKDEELTKERSERKSVEK 1560
>At5g58320.2 68418.m07301 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 558
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 118 EDGEEALSE-EVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIK 294
E+ E+ SE EVL + E L ++ ++SE+ R+ E++A++D+ E ++++
Sbjct: 447 EEEEKLKSEIEVLTLEKVEKGRCIETLSRKVSELESEISRLGSEIKARDDRTMEMEKEVE 506
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 166 DEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKI 291
DEI +++ L+ ++K + + R+S E++ Q +KE + I
Sbjct: 255 DEIEDKSKKLEYQVKEQEDIIQRLSMEIKDQKKLLKEQKDAI 296
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 12/66 (18%)
Frame = +1
Query: 505 GVNKDSYLILETLPAEYDARVKAMEV----------DERPTEQ--YSDIGGLDKQIXELI 648
G+ + ++ET PAEY E+ DE + Y D+GG+ KQ+ ++
Sbjct: 161 GMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIR 220
Query: 649 EAVVLP 666
E V LP
Sbjct: 221 ELVELP 226
>At1g33960.1 68414.m04209 avirulence-responsive protein / avirulence
induced gene (AIG1) identical to AIG1 (exhibits RPS2-
and avrRpt2-dependent induction early after infection
with Pseudomonas) SP:U40856 [Arabidopsis thaliana]
(Plant Cell 8 (2), 241-249 (1996))
Length = 353
Score = 28.3 bits (60), Expect = 4.9
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +1
Query: 28 VQELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEI 207
V ELL L D K N+NI + I E+ E E+ + L E+
Sbjct: 220 VHELLKLIDLVRKQNNNIPYTDEMY-HMIKEENERHKKEQEELESKGHSEEQLAALMKEL 278
Query: 208 KIMKSEVMRISHELQAQNDKI-KENTEKI 291
+IM ++ E+ +N KI E EK+
Sbjct: 279 QIMNERNLKAMAEMMEKNMKIAMEAQEKL 307
>At1g28020.1 68414.m03431 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 612
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 484 LKPGDLVGVNKDSYLILETLPAEYDARVKAM 576
LK D+VG ++ Y + E+LP E+D R+ M
Sbjct: 326 LKVDDIVGA-EEIYKVWESLPLEFDHRIPTM 355
>At5g06850.1 68418.m00774 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 669
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 256 QNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 369
Q + ++ K+ V+ L YL NVIE DV+P + +
Sbjct: 74 QGEGVQSVRSKVYVSPKLWYLRVNVIEAQDVEPSDRSQ 111
>At3g20950.1 68416.m02648 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max];
Length = 526
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 31 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVL 153
QE LK +Y EKT + + + D +WED EE E +
Sbjct: 388 QERCELKGFYIPEKTLLVVNVYAIMRDPKLWEDPEEFKPERFI 430
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/72 (18%), Positives = 40/72 (55%)
Frame = +1
Query: 145 EVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVS 324
EVL+ ++ S+ + + +++I+++++ + +L+ ++ E+++ ++S
Sbjct: 1042 EVLQKEVNDFQSKENVTEKQVEILETQMEELQDKLRDTTMDNEQLQEQLRGKDMELLIIS 1101
Query: 325 NVIELLDVDPQE 360
N +ELL + +E
Sbjct: 1102 NEMELLTSELEE 1113
>At2g43990.1 68415.m05470 expressed protein
Length = 632
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = -3
Query: 662 NTTASINSXICLSRPPISEYCSVGLSSTSIAFTLASYSAGSVSKIK*ESLLTPTKSPGLS 483
++++S +S R P+ S+ ++ L S+ ++K +S LT + S
Sbjct: 82 SSSSSSSSLGVFPRRPVRSVAKNPKSAPVVSKPLIRKKPSSLEEVKLKSTLTEKPNLLKS 141
Query: 482 FSASTKPMTGKKYVCRV 432
T P++GK+ C++
Sbjct: 142 QRCKTNPVSGKRPTCKI 158
>At5g64330.1 68418.m08080 non-phototropic hypocotyl 3 (NPH3)
identical to non-phototropic hypocotyl 3 [Arabidopsis
thaliana] gi|6224712|gb|AAF05914, PMID:10542152
Length = 746
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 205 IKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVV 384
++++ SE ++IS+ L N +KE+T + T ++ N L++ PQ +E A
Sbjct: 596 VQVLFSEQVKISNALA--NTSLKESTTLGEAMGTYQPMIPNRKTLIEATPQSFQEGWAAA 653
Query: 385 DLD-SQRKGKCAVIKT 429
D + K + +KT
Sbjct: 654 KKDINTLKFELETVKT 669
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 27.5 bits (58), Expect = 8.5
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +1
Query: 217 KSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELL-----DVDPQEEEEDGAV 381
+S S ++Q+ K K + +KV L N ++ + +PQEEEE+
Sbjct: 662 RSAAQSSSQPKESQSSK-KNKGKAVKVVDPKETLADNFMDTVRRLQSSQNPQEEEEEAIS 720
Query: 382 VDLDSQR--KGKCAVIKTSTRQT 444
D ++ R KGK V+ T + T
Sbjct: 721 KDKNTYRSDKGKSQVVGTDSSST 743
>At3g45580.1 68416.m04923 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature
Length = 408
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 361 EEEDGAVVDLDSQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILE 537
EEE V D + G+ + IK + + YF ++ E L + +KD L+ +
Sbjct: 2 EEESTLVRAEDPKHVGRVSSEIKPDSYRLYFKGLVSEETVELLAGFGVAICDKDDNLLFQ 61
Query: 538 TLPAEYDARVKAMEVD 585
+D+RV +EV+
Sbjct: 62 MKEQVHDSRVTVLEVE 77
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 27.5 bits (58), Expect = 8.5
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Frame = +1
Query: 100 EDKSIWEDGEEALS---EEVLRMPTD-EIVSRTRLLDNEIKIMKS---EVMRISHELQAQ 258
E+K+IW E+AL+ EE +R+ + +I S ++ + E K ++S E + ++ L+
Sbjct: 1010 EEKAIWSSKEKALTEAVEEKIRLYKNIQIESLSKEMSEEKKELESCRLECVTLADRLRCS 1069
Query: 259 NDKIKENTE-KIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVD-LDSQRKGKCAVIKTS 432
+ K++ E ++ + + L + V Q +E + +D L S+ + C + T
Sbjct: 1070 EENAKQDKESSLEKSLEIDRLGDELRSADAVSKQSQEVLKSDIDILKSEVQHACKMSDTF 1129
Query: 433 TRQ 441
R+
Sbjct: 1130 QRE 1132
>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
GTP-binding protein ERG SP:O82653 from [Arabidopsis
thaliana]
Length = 437
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 106 KSIWEDGEEALSEEVLRMPTDEIVSRTRLLDN 201
K WE+ +SEEVL+ + E+V R RLLD+
Sbjct: 330 KKPWEEDAFTMSEEVLKNISLEVV-RERLLDH 360
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.133 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,278,490
Number of Sequences: 28952
Number of extensions: 231576
Number of successful extensions: 705
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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