Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p13
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    29   0.026
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    26   0.24 
S73230-1|AAB30812.1|   35|Tribolium castaneum twist protein.           25   0.55 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   5.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.0  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 29.5 bits (63), Expect = 0.026
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 218 EREERISLNNSFRSVRSAKTTEPSHSLDSTKTRHGSLRY-DF 340
           ER+   SLN +F S+R +  T PS  L   +T   + RY DF
Sbjct: 105 ERQRTQSLNEAFASLRKSIPTMPSDKLSKIQTLKLAARYIDF 146


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 156 FLSQLMLGSLVHVDGSSSVGEASFELELDETSRVSQSELTASNRF 22
           FL +   G  ++ DG   + E    ++ D+ S VSQSE    +RF
Sbjct: 3   FLGESPNGIYLYHDGRVKLLEGRRVVDCDDVSSVSQSEAGDEDRF 47


>S73230-1|AAB30812.1|   35|Tribolium castaneum twist protein.
          Length = 35

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 218 EREERISLNNSFRSVRSAKTTEPSHSL 298
           ER+   SLN +F S+R +  T PS  L
Sbjct: 5   ERQRTQSLNEAFASLRKSIPTMPSDKL 31


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +2

Query: 164 ISEEIEEELQFHNDYFKTEREER-ISLNNSFRSVRSAKTTEPSHSLDSTKTRHGSLRYDF 340
           +SE+  +    H D +++ERE+  +      R V  A T   +  LD    +H  + YD 
Sbjct: 429 LSEQNIQSTSIHGDRYQSEREKALLDFKTGHRKVLVA-TGVAARGLDIKDVQH-VINYDL 486

Query: 341 KSS 349
             S
Sbjct: 487 PKS 489


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 131 EPSMSCDKKNPISEEIEEE 187
           E S S  KK  + EEIE+E
Sbjct: 206 EKSASIPKKKEVKEEIEDE 224


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 119 STGRLQWARPPSS 81
           +T R +WARPPS+
Sbjct: 406 TTPRPEWARPPST 418


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 424 AVTYLPLIDFVVINEA 377
           A  +LPL+DF V+ EA
Sbjct: 244 AAQFLPLMDFSVLVEA 259


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 424 AVTYLPLIDFVVINEA 377
           A  +LPL+DF V+ EA
Sbjct: 244 AAQFLPLMDFSVLVEA 259


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 178 DFFGYWILFVATHA 137
           D FG+ ILF+ T+A
Sbjct: 223 DIFGWQILFLITYA 236


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 178 DFFGYWILFVATHA 137
           D FG+ ILF+ T+A
Sbjct: 223 DIFGWQILFLITYA 236


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 221 REERISLNNSFRSVRSAKTTEPSHSL 298
           R  R  + NSF SV  A+ T   H L
Sbjct: 342 RRYRFRMINSFASVCPAQLTIQGHDL 367


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 221 REERISLNNSFRSVRSAKTTEPSHSL 298
           R  R  + NSF SV  A+ T   H L
Sbjct: 342 RRYRFRMINSFASVCPAQLTIQGHDL 367


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 176 IEEELQFHNDYFKTEREERISLNNSFRS 259
           + ++++F N Y + + E RIS    F S
Sbjct: 195 LNKQIRFLNQYLRLKPEGRISNRRVFIS 222


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 176 IEEELQFHNDYFKTEREERISLNNSFRS 259
           + ++++F N Y + + E RIS    F S
Sbjct: 213 LNKQIRFLNQYLRLKPEGRISNRRVFIS 240


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 155 KNPISEEIEEELQFHNDYFKTEREERISLN 244
           K    +  E+E  FH++  K E E++ S++
Sbjct: 885 KREAEDRDEDERSFHSNGAKEEDEDKPSVS 914


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,725
Number of Sequences: 336
Number of extensions: 2650
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)