Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p13
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70034-7|CAA93856.1| 855|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 30 1.3
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 29 2.2
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81084-5|CAI79227.1| 447|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81084-4|CAB03109.2| 476|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical... 29 3.9
AF067208-1|AAC16975.1| 298|Caenorhabditis elegans Hypothetical ... 29 3.9
Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical pr... 28 5.1
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 5.1
AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane... 28 5.1
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41279-15|AAK31417.2| 316|Caenorhabditis elegans Hypothetical p... 28 6.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 6.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 6.8
Z80216-4|CAB02281.1| 395|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z70312-7|CAH04716.1| 263|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z70311-13|CAA94375.2| 263|Caenorhabditis elegans Hypothetical p... 27 9.0
Z70311-7|CAH04719.1| 154|Caenorhabditis elegans Hypothetical pr... 27 9.0
DQ907010-1|ABI83734.1| 405|Caenorhabditis elegans EAK-6B isofor... 27 9.0
DQ907009-1|ABI83733.1| 388|Caenorhabditis elegans EAK-6A isofor... 27 9.0
>Z70034-7|CAA93856.1| 855|Caenorhabditis elegans Hypothetical
protein C18E9.7 protein.
Length = 855
Score = 30.7 bits (66), Expect = 0.96
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 296 LDSTKTRHGSLRYDFKSSASLEQVSYRCLVNNNKVDKRKVRYRSSVTYSLSLE 454
+D+T T G+ YD+ SSA EQ S + L N + + +S YS +E
Sbjct: 138 IDTTFTTQGTANYDYSSSA--EQYSVKTLPPNFNIGLQTTTEMTSYEYSREVE 188
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +1
Query: 109 RPVDMYQRTEHELRQKESNIRRNRRRTAVPQRLLQDRERRTDQSK*FVPFSSFSENDRTE 288
R +++ + ++ +Q +S R+N RR +VPQ Q +++ + +S S+ND +
Sbjct: 351 RAIELRNQQVYQKQQIQSQNRKNERRPSVPQYHQQQHQQQQHE------YSQHSQNDSYD 404
Query: 289 SF 294
S+
Sbjct: 405 SY 406
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +1
Query: 109 RPVDMYQRTEHELRQKESNIRRNRRRTAVPQRLLQDRERRTDQSK*FVPFSSFSENDRTE 288
R +++ + ++ +Q +S R+N RR +VPQ Q +++ + +S S+ND +
Sbjct: 351 RAIELRNQQVYQKQQIQSQNRKNERRPSVPQYHQQQHQQQQHE------YSQHSQNDSYD 404
Query: 289 SF 294
S+
Sbjct: 405 SY 406
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 127 QRTEHELRQKESNIRRNRRRTAVPQRLLQDR--ERRTDQSK*FVPFSSFSENDRTESFAR 300
+R E E +K ++ + R R A R +DR ER D+S V S S++ + S R
Sbjct: 525 KRREKESSKKRRSVEKERPRRADEHRRDRDRDRERDRDRSHRDVRSSGRSKDIKASSSHR 584
Query: 301 FD*DEAR 321
D D+AR
Sbjct: 585 RDRDDAR 591
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 156 RIQYPKKSKKNCSSTTITSRPREKNGS 236
++ PKKSKKN S T++P EK +
Sbjct: 306 KLSKPKKSKKNRKSEQTTAKPEEKESN 332
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Frame = +2
Query: 101 TEDDPSTCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREERISLNNSFRSVRSAK-- 274
TE++ S T E S ++ EE EEE + D++ E+ + + N + V
Sbjct: 13 TEEESSVQTLEESEEDEQGGEEDEEDEEEEEIDEDHWVVEKVQEMRYNGKLKRVEFLVLW 72
Query: 275 TTEPSHSLDSTKTRHGSL------RYDFKSSASLEQVSYRCLVNNNKVDKRK 412
+ S S + + HG R+ + E V+ + V N K +K
Sbjct: 73 QADKSTSWEPIENFHGGYENLEIQRFQTEHPKRFEDVTNKATVANKKGRPKK 124
>Z81084-5|CAI79227.1| 447|Caenorhabditis elegans Hypothetical
protein F46A9.3b protein.
Length = 447
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 275 TTEPSHSLDSTKTRHGSLRYDFKSSASLEQVSYRCLVNNNKVDKRKVRYRSSVTYSLSL 451
T E ++S R LR ++S ++ RCL N K D+ + ++S+ YSL +
Sbjct: 57 TLEKRLCIESLLNRDNRLRLT-RASDVAAAIAERCLTENVKDDRMQWSFKSAALYSLGI 114
>Z81084-4|CAB03109.2| 476|Caenorhabditis elegans Hypothetical
protein F46A9.3a protein.
Length = 476
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 275 TTEPSHSLDSTKTRHGSLRYDFKSSASLEQVSYRCLVNNNKVDKRKVRYRSSVTYSLSL 451
T E ++S R LR ++S ++ RCL N K D+ + ++S+ YSL +
Sbjct: 86 TLEKRLCIESLLNRDNRLRLT-RASDVAAAIAERCLTENVKDDRMQWSFKSAALYSLGI 143
>Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical
protein C07A9.8 protein.
Length = 453
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 296 LDSTKTRHGSLRYDFKSSASLEQVSY 373
LDS TR SL+Y F S+A +E++SY
Sbjct: 388 LDSDDTR--SLKYHFGSAAQMEEISY 411
>AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical
protein Y48A6B.10 protein.
Length = 489
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +2
Query: 95 SPTEDDPSTCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREERISLNNSFRSVRSAK 274
SP DP + + ++ EE EEE N+ ERE R + N R ++ K
Sbjct: 333 SPPPPDPENQKKKKKLKKADESEDHEEAEEEEDKENEISVEEREARRAKNRKIREKKARK 392
>AF067208-1|AAC16975.1| 298|Caenorhabditis elegans Hypothetical
protein C46F2.1 protein.
Length = 298
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2
Query: 194 FHNDYFKTEREERI---SLNNSFRSVRSAKTTEPSH 292
F++ Y ++ERE R S N +FR +R+ + + PSH
Sbjct: 90 FNSGYKESEREFRNLQRSRNRAFREIRAQRRSSPSH 125
>Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical
protein T24C2.1 protein.
Length = 711
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 116 STCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREER----ISLNNSFRSVRSA-KTT 280
S SEP ++ K+ + +E ++ H D KTE+ E+ + + N R+ +A +TT
Sbjct: 404 SNLNSEPIVNVQKEMHLQKEPVHKVFTHKDPLKTEKTEKFMKLVQIENEDRNHGAALETT 463
Query: 281 EPSHSLDST 307
+ S +T
Sbjct: 464 QQSRMFTTT 472
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 109 RPVDMYQRTEHELRQKESNIRRNRRRTAVPQRLLQDRERRTDQ 237
+P+ RT+ E+R K+ +R + R + ++ E++ DQ
Sbjct: 841 KPLLQVTRTDDEIRAKDDELRATKERLLKMEHDFRENEKKLDQ 883
>AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane
protein RAM-5 protein.
Length = 711
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 116 STCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREER----ISLNNSFRSVRSA-KTT 280
S SEP ++ K+ + +E ++ H D KTE+ E+ + + N R+ +A +TT
Sbjct: 404 SNLNSEPIVNVQKEMHLQKEPVHKVFTHKDPLKTEKTEKFMKLVQIENEDRNHGAALETT 463
Query: 281 EPSHSLDST 307
+ S +T
Sbjct: 464 QQSRMFTTT 472
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 101 TEDDPSTCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREERISLNNSFRSVRSAKTT 280
T+DDP TS S++ +E+I E + ER+E + + R + + +
Sbjct: 219 TDDDPIPFTSRRSITGSVSYNYAEQIAERRRVEQQQEDRERQEMLEVERQRRVLEDRRNS 278
Query: 281 E 283
E
Sbjct: 279 E 279
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 101 TEDDPSTCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREERISLNNSFRSVRSAKTT 280
T+DDP TS S++ +E+I E + ER+E + + R + + +
Sbjct: 219 TDDDPIPFTSRRSITGSVSYNYAEQIAERRRVEQQQEDRERQEMLEVERQRRVLEDRRNS 278
Query: 281 E 283
E
Sbjct: 279 E 279
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 101 TEDDPSTCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREERISLNNSFRSVRSAKTT 280
T+DDP TS S++ +E+I E + ER+E + + R + + +
Sbjct: 219 TDDDPIPFTSRRSITGSVSYNYAEQIAERRRVEQQQEDRERQEMLEVERQRRVLEDRRNS 278
Query: 281 E 283
E
Sbjct: 279 E 279
>Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical
protein C11G6.1 protein.
Length = 643
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 149 DKKNPISEEIEEELQFHNDYFKTEREERISLNNSFRSVRSAKTTEP 286
+K++ SEE +E + + + EREER S N + + KT+ P
Sbjct: 582 EKRDKSSEEYKEYKRLKKEKRRKEREERKSAENCVK-IEKEKTSTP 626
>U41279-15|AAK31417.2| 316|Caenorhabditis elegans Hypothetical
protein C17C3.3 protein.
Length = 316
Score = 27.9 bits (59), Expect = 6.8
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 192 SSTTITSRPREKNGSV*IIRSVQFVQRKRPNRVIR---SIRLRRGTVASDMTLRVP-PRW 359
S+ I R K+G IIR+V+ VQ R V++ I + G + D+ +VP P
Sbjct: 76 STPAIYKVKRIKDGKTFIIRTVEAVQNDRICFVLQVSFHISEKSGMIHQDIMPKVPNPES 135
Query: 360 SRSLIDASLITTKSI 404
S+ DA + T K +
Sbjct: 136 LMSMKDAVISTKKLV 150
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 270 RKRPNRVIRSIRLRRGTVASDMTLRVPPRWSRSLIDASLITTKSI 404
+KR R I+ + RR A +T +PPR+ + L D I +++
Sbjct: 12413 KKRKKRRIKRVVERRNPNAPRLTQLIPPRFDKILSDHDAIEGENV 12457
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 270 RKRPNRVIRSIRLRRGTVASDMTLRVPPRWSRSLIDASLITTKSI 404
+KR R I+ + RR A +T +PPR+ + L D I +++
Sbjct: 12413 KKRKKRRIKRVVERRNPNAPRLTQLIPPRFDKILSDHDAIEGENV 12457
>Z80216-4|CAB02281.1| 395|Caenorhabditis elegans Hypothetical
protein F10G8.4 protein.
Length = 395
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 203 RCGTAVLLRFL-RILDSFCRNSCSVRWYM 120
RCG +++ L ++D+ +NS S+ W+M
Sbjct: 261 RCGVFIIIDILINLIDNRIKNSYSIEWWM 289
>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
protein B0240.3 protein.
Length = 1093
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2
Query: 95 SPTEDDPSTCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREERISLNNSFRSVR 265
SP E+D S + + + + P+ I E ++ HND K L N F SVR
Sbjct: 642 SPREEDDSVLIDDENDAIASRFPLPIIIPEGIEMHNDLIK-------MLENCFGSVR 691
>Z70312-7|CAH04716.1| 263|Caenorhabditis elegans Hypothetical
protein T25B9.3a protein.
Length = 263
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 134 PSMSCDKK--NPISEEIEEELQFHNDYFKTEREER 232
P + C K +P+S+++ + FH D K +E+R
Sbjct: 167 PELRCSKGVLSPVSQQVIQHASFHFDLSKLPKEDR 201
>Z70311-13|CAA94375.2| 263|Caenorhabditis elegans Hypothetical
protein T25B9.3a protein.
Length = 263
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 134 PSMSCDKK--NPISEEIEEELQFHNDYFKTEREER 232
P + C K +P+S+++ + FH D K +E+R
Sbjct: 167 PELRCSKGVLSPVSQQVIQHASFHFDLSKLPKEDR 201
>Z70311-7|CAH04719.1| 154|Caenorhabditis elegans Hypothetical
protein T25B9.3b protein.
Length = 154
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 134 PSMSCDKK--NPISEEIEEELQFHNDYFKTEREER 232
P + C K +P+S+++ + FH D K +E+R
Sbjct: 58 PELRCSKGVLSPVSQQVIQHASFHFDLSKLPKEDR 92
>DQ907010-1|ABI83734.1| 405|Caenorhabditis elegans EAK-6B isoform
protein.
Length = 405
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 203 RCGTAVLLRFL-RILDSFCRNSCSVRWYM 120
RCG +++ L ++D+ +NS S+ W+M
Sbjct: 254 RCGVFIIIDILINLIDNRIKNSYSIEWWM 282
>DQ907009-1|ABI83733.1| 388|Caenorhabditis elegans EAK-6A isoform
protein.
Length = 388
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 203 RCGTAVLLRFL-RILDSFCRNSCSVRWYM 120
RCG +++ L ++D+ +NS S+ W+M
Sbjct: 254 RCGVFIIIDILINLIDNRIKNSYSIEWWM 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,730,061
Number of Sequences: 27780
Number of extensions: 264876
Number of successful extensions: 1277
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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