Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p13
(662 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g22795.1 68415.m02704 expressed protein 34 0.097
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 30 1.6
At4g21340.1 68417.m03083 ethylene-responsive protein-related con... 29 3.6
At5g39740.1 68418.m04813 60S ribosomal protein L5 (RPL5B) riboso... 28 4.8
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 28 4.8
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 28 4.8
At3g26445.1 68416.m03297 glycosyl transferase family 17 protein ... 28 4.8
At1g67580.1 68414.m07699 protein kinase family protein contains ... 28 6.4
At4g20860.1 68417.m03026 FAD-binding domain-containing protein s... 27 8.4
At2g32900.1 68415.m04033 centromere/kinetochore protein, putativ... 27 8.4
At2g30400.1 68415.m03702 ovate family protein 57% similar to ova... 27 8.4
At1g67230.1 68414.m07652 expressed protein 27 8.4
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 33.9 bits (74), Expect = 0.097
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Frame = +2
Query: 32 EAVNSDCETLDVXXXXXXKEASP--TEDDPSTCTSEPSMSCDKKNPISEEIEEELQFHND 205
E+ + ET D +E+ TE +S + DK+ E++E Q N+
Sbjct: 427 ESKGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQEKNE 486
Query: 206 YFKTEREERISLNNSFRSVRSAKTTEPSHSLDSTKTRHGSLRYDFKSSASLEQVSYRCLV 385
+TE+ E L + K E S S + T+ + + D + S+S E+ +
Sbjct: 487 DKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETK-DNEESSSQEETKDK--- 542
Query: 386 NNNKVDKRK 412
N K++K +
Sbjct: 543 ENEKIEKEE 551
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 29.9 bits (64), Expect = 1.6
Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Frame = +2
Query: 86 KEASPTEDDPSTCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREERISLNN------ 247
+E S TE DP E S +K+ EE EEE + + E EE+ N
Sbjct: 70 EEPSLTEQDPENVEEEESEEEEKEEEEKEEEEEEEGEEEEEEEEEEEEKEEEENVGGEES 129
Query: 248 SFRSVRSAKTTEPSHSLDSTKTRHGSLRYDFKSSASLEQVSYRCLVNNNKVDKRKVRYRS 427
S S RS P + RH L++ F+ ++ + + + + Y
Sbjct: 130 SDDSTRSLGKRPPPMRI--WMRRH-QLQWKFRRLCNMNECLLQEIDEETEAVPPLSMYFP 186
Query: 428 SVTYSLSLELS--CFI-KIXXXXXXXXXXXXXXNKVCFSEHSSYSHMF 562
Y ++LS C+I ++ ++ F H S+ H+F
Sbjct: 187 PSEYVKKIKLSTRCYIHELLTTFDKLEPPMSKSERLWFENHPSFQHIF 234
>At4g21340.1 68417.m03083 ethylene-responsive protein-related
contains similarity to ethylene-inducible ER33 protein
[Lycopersicon esculentum] gi|5669656|gb|AAD46413
Length = 301
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 162 QYPKKSKKNCSSTTITSRPREKNGSV*IIRSVQFVQRKR 278
Q PK+ + C S T R EK+G + I S Q ++R R
Sbjct: 141 QKPKEDMQACKSLTTCKRASEKSGELEDIESSQPLKRPR 179
>At5g39740.1 68418.m04813 60S ribosomal protein L5 (RPL5B) ribosomal
protein L5, rice
Length = 301
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +2
Query: 164 ISEEIEEELQFHNDYFKTEREERISLNNSFRSVRSAKTTEPSHSLDSTKTRHGSLRYDFK 343
+ E+ E+LQ H + + E S+ ++ V +A EP+H RY+ K
Sbjct: 210 LGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLK 269
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = -1
Query: 632 STLDSREHAAFHNAT*NKMHGHKQTCGNNLNVRKSKLY*KTKENKTKSINNHKF**NRTI 453
S+ S A F + N H H+ +N+ S ++ SI+N NR+I
Sbjct: 50 SSFSSPSTAFFSSHNQNNHHQHRSASPTRVNLFTSA---PMTQSFRYSIDNRSISPNRSI 106
Query: 452 LNSGSKLRNCGNVPSSYRLC 393
S +K N +P S R C
Sbjct: 107 AVSSNKPSNHHKIPDSRRRC 126
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = -1
Query: 632 STLDSREHAAFHNAT*NKMHGHKQTCGNNLNVRKSKLY*KTKENKTKSINNHKF**NRTI 453
S+ S A F + N H H+ +N+ S ++ SI+N NR+I
Sbjct: 50 SSFSSPSTAFFSSHNQNNHHQHRSASPTRVNLFTSA---PMTQSFRYSIDNRSISPNRSI 106
Query: 452 LNSGSKLRNCGNVPSSYRLC 393
S +K N +P S R C
Sbjct: 107 AVSSNKPSNHHKIPDSRRRC 126
>At3g26445.1 68416.m03297 glycosyl transferase family 17 protein
contains Pfam profile PF04724: Glycosyltransferase
family 17
Length = 118
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 434 LRNCGNVPSSYRLCCY*RGID 372
L + G V S YRLCC RG+D
Sbjct: 10 LADSGTVFSIYRLCCVLRGVD 30
>At1g67580.1 68414.m07699 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 752
Score = 27.9 bits (59), Expect = 6.4
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 136 EHELRQKESNIRRNRRRTAVPQRLLQD-RERRTDQSK*FVPFSSFSENDRTESFAR 300
+HELR +ESN R +RR +A R D K V + DR +S AR
Sbjct: 11 DHELRDQESNSRFSRRDSAYANEDYNHVRNGAIDNGKGRVSNLRHGDRDRIKSGAR 66
>At4g20860.1 68417.m03026 FAD-binding domain-containing protein
simlar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 530
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 92 ASPTEDDPSTCTSEPSMSCDKKNPISEEIEE-ELQFHNDYFKTEREERISLNNSFRSVRS 268
++PT + C S + KNPI+ + + H D+ ++ LN +F S++
Sbjct: 22 STPTREQFQNCLSTKQFNSTLKNPINLTTHTLDSRVHTDFSESSSPNSSFLNLNFTSLKP 81
Query: 269 AKTTEP 286
+P
Sbjct: 82 ILIVKP 87
>At2g32900.1 68415.m04033 centromere/kinetochore protein, putative
(ZW10) identical to centromere/kinetochore protein zw10
homolog SP:O48626 from [Arabidopsis thaliana]
Length = 742
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 197 GTAVLLRFLRILDSFCRNSC--SVRWYMSTGRLQWAR 93
G A+ L+++ C + C +V W S GRL W R
Sbjct: 296 GDAMYSGILKVVKFICSSLCFGNVTWIHSFGRLTWPR 332
>At2g30400.1 68415.m03702 ovate family protein 57% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 320
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/63 (22%), Positives = 25/63 (39%)
Frame = +2
Query: 86 KEASPTEDDPSTCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREERISLNNSFRSVR 265
K+ + + +S S +C KK P S+ + + F N S NS + +
Sbjct: 21 KDVTKHSKPKNKASSSSSNTCSKKKPSSDSLPQHSYFSNSLVANNPPHHNSPRNSLHTKK 80
Query: 266 SAK 274
+K
Sbjct: 81 MSK 83
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 164 ISEEIEEELQFHNDYFKTEREERISLNNSFRSV 262
I EE E ELQ F+ ERE+ +S N R V
Sbjct: 625 ILEEKERELQAKKKLFEEEREKELSNINYLRDV 657
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,833,364
Number of Sequences: 28952
Number of extensions: 242606
Number of successful extensions: 881
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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