BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov10p10 (706 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_03_0156 - 11963580-11963914,11964422-11964517,11964618-119646... 34 0.096 08_02_1358 - 26372559-26372887,26373183-26373262,26373287-263734... 33 0.22 06_03_0852 - 25371461-25371783,25372080-25372159,25372472-253725... 33 0.29 09_01_0014 + 357398-357583,360213-360323,360520-360676,361067-36... 29 4.8 06_03_0391 - 20287755-20288084,20288174-20288414,20288519-202888... 29 4.8 02_05_1332 + 35758657-35758728,35758959-35760689 28 8.3 >04_03_0156 - 11963580-11963914,11964422-11964517,11964618-11964697, 11965250-11965290,11965402-11965548,11965922-11966035, 11968842-11968961,11969491-11969631,11969892-11970014, 11970357-11970566 Length = 468 Score = 34.3 bits (75), Expect = 0.096 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = +3 Query: 621 YPVEEHTVATDDGYHLTVLRIP 686 Y EEHTV T+DGY L++ RIP Sbjct: 64 YACEEHTVTTEDGYILSLQRIP 85 >08_02_1358 - 26372559-26372887,26373183-26373262,26373287-26373420, 26373546-26373689,26373809-26373919,26374165-26374305, 26376839-26376964,26377072-26377263 Length = 418 Score = 33.1 bits (72), Expect = 0.22 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +3 Query: 621 YPVEEHTVATDDGYHLTVLRIP 686 YP EEH V T DGY L + RIP Sbjct: 58 YPCEEHEVTTQDGYILGLQRIP 79 >06_03_0852 - 25371461-25371783,25372080-25372159,25372472-25372554, 25372597-25372740,25372836-25372946,25373238-25373354, 25373436-25373562,25374160-25374296 Length = 373 Score = 32.7 bits (71), Expect = 0.29 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +3 Query: 621 YPVEEHTVATDDGYHLTVLRIP 686 YP EE+ V T+DGY L++ RIP Sbjct: 82 YPCEEYKVTTEDGYILSLKRIP 103 >09_01_0014 + 357398-357583,360213-360323,360520-360676,361067-361233, 362012-362122,362206-362349,362436-362476,364134-364174, 364175-364261,365402-365724 Length = 455 Score = 28.7 bits (61), Expect = 4.8 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 Query: 600 ELLKKHQYPVEEHTVATDDGYHLTVLRIP 686 +LL YP EH V T DG+ L++ IP Sbjct: 49 QLLLPLGYPCTEHNVETKDGFLLSLQHIP 77 >06_03_0391 - 20287755-20288084,20288174-20288414,20288519-20288844, 20288954-20289097,20289260-20289380,20289645-20289733, 20289821-20289891,20290165-20290309,20290390-20290479, 20290991-20291239 Length = 601 Score = 28.7 bits (61), Expect = 4.8 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Frame = +3 Query: 402 SVVWKNIEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKK----NTFHDAISETQRE 569 SVV K + M++ P+ PVQ E D + + W+ A+K H E E Sbjct: 109 SVVTKLLLMSNFPSLPVQNESDSDSV---KFSLWEEPYKQARKWKPCAAKHSLPDEVPEE 165 Query: 570 NNEDFHL 590 NN F L Sbjct: 166 NNNGFIL 172 >02_05_1332 + 35758657-35758728,35758959-35760689 Length = 600 Score = 27.9 bits (59), Expect = 8.3 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 5/96 (5%) Frame = +3 Query: 390 NHGDSVVWKNIEMASGPNSPVQTEQDIEDIFGDSLKTWDHF----TDDAKKNTFHDAISE 557 N D +V N E +G + Q E D+ ++GDSL D DDA + E Sbjct: 500 NIEDDIVGMNTE-GNGEEA-FQPEDDV--VYGDSLSPADDIAAEAADDASRELEEQQDVE 555 Query: 558 TQRENNEDF-HLNATELLKKHQYPVEEHTVATDDGY 662 T E + + +NA E +Y E+ + DD + Sbjct: 556 TAEEYDYEMDDVNAAEENDYQEYEDEDDDLEDDDDF 591 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,174,278 Number of Sequences: 37544 Number of extensions: 316760 Number of successful extensions: 789 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 769 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 789 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1815633512 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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