Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p08
         (596 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p pro...   199   3e-51
AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA...   199   3e-51
X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal  pro...   191   7e-49
BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p pro...    77   1e-14
AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p pro...    66   3e-11
BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p pro...    64   1e-10
BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p pro...    64   1e-10
BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p pro...    64   1e-10
AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA...    64   1e-10
AY051415-1|AAK92839.1|  382|Drosophila melanogaster GH09360p pro...    30   2.1  
AE014297-77|AAF52133.1|  382|Drosophila melanogaster CG9855-PA p...    30   2.1  
AE014297-4130|AAF56715.1|  448|Drosophila melanogaster CG13972-P...    29   3.6  

>AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p
           protein.
          Length = 252

 Score =  199 bits (485), Expect = 3e-51
 Identities = 99/158 (62%), Positives = 117/158 (74%)
 Frame = +2

Query: 122 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 301
           PV  K  +KKLPAVPES LK             +  LK+ +    +K+E   RAE+Y  E
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63

Query: 302 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNG 481
           Y   E+ EI+L R A+ R  +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNG
Sbjct: 64  YIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNG 123

Query: 482 VFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 595
           VF++LNKAT+NMLRIAEPYI WGYPNLKSVREL+YKRG
Sbjct: 124 VFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRG 161


>AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA
           protein.
          Length = 252

 Score =  199 bits (485), Expect = 3e-51
 Identities = 99/158 (62%), Positives = 117/158 (74%)
 Frame = +2

Query: 122 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 301
           PV  K  +KKLPAVPES LK             +  LK+ +    +K+E   RAE+Y  E
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63

Query: 302 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNG 481
           Y   E+ EI+L R A+ R  +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNG
Sbjct: 64  YIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNG 123

Query: 482 VFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 595
           VF++LNKAT+NMLRIAEPYI WGYPNLKSVREL+YKRG
Sbjct: 124 VFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRG 161


>X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal
           protein protein.
          Length = 239

 Score =  191 bits (465), Expect = 7e-49
 Identities = 94/148 (63%), Positives = 111/148 (75%)
 Frame = +2

Query: 152 LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIR 331
           LPAVPES LK             +  LK+ +    +K+E   RAE+Y  EY   E+ EI+
Sbjct: 1   LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIK 60

Query: 332 LARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATV 511
           L R A+ R  +YVP EAKLAFV+RIRGIN+V+PKVRKVLQLFRLRQINNGVF++LNKAT+
Sbjct: 61  LRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATI 120

Query: 512 NMLRIAEPYIAWGYPNLKSVRELVYKRG 595
           NMLRIAEPYI WGYPNLKSVREL+YKRG
Sbjct: 121 NMLRIAEPYITWGYPNLKSVRELIYKRG 148


>BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p
           protein.
          Length = 227

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
 Frame = -2

Query: 595 STFVY*LTDTL*VGVSPSNVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDLR*NLV 416
           ST V  L   L +G++P +V LGD  H+   L+Q  +HT+V L Q++QLQN  DL  +LV
Sbjct: 36  STLVDQLPHGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLGSHLV 95

Query: 415 DTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFLDVL 287
           DT D+DDK QFG  G+V +  +   +   D   F LD + L +L
Sbjct: 96  DTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLL 139


>AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p
           protein.
          Length = 257

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
 Frame = +2

Query: 149 KLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREI-----FKRAEQYVKEYRIK 313
           KLP    SVLKH             V  ++R+  IKK+        F+RAE +V  Y   
Sbjct: 10  KLPGKTVSVLKHRKRRILQDE---SVVTQKRNDRIKKRTATKNHHKFRRAESFVMGYLKA 66

Query: 314 ERDEIRLARQARNRGNYYVPGEA------KLAFVIRIRGINQVSPKVRKVLQLFRLRQIN 475
           ER   R+ +            +A      KL FV+R+ G          + +  R+   +
Sbjct: 67  ERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRLAGKKIFDKTTADIFRTLRMGSRH 126

Query: 476 NGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 595
           N VF+   K    +LR+ EP++ +G P+L S+RELV+K+G
Sbjct: 127 NAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKG 166


>BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p
           protein.
          Length = 257

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
 Frame = +2

Query: 149 KLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREI-----FKRAEQYVKEYRIK 313
           KLP    SVLKH             V  ++R+  IKK+        F+RAE +V  Y   
Sbjct: 10  KLPGKTVSVLKHRKRRILQDE---SVVTQKRNDRIKKRTATKNHHKFRRAESFVMGYLKA 66

Query: 314 ERDEIRLARQARNRGNYYVPGEA------KLAFVIRIRGINQVSPKVRKVLQLFRLRQIN 475
           ER   R+ +            +A      KL FV+R  G          + +  R+   +
Sbjct: 67  ERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKKIFDKTTADIFRTLRMGSRH 126

Query: 476 NGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 595
           N VF+   K    +LR+ EP++ +G P+L S+RELV+K+G
Sbjct: 127 NAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKG 166


>BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p
           protein.
          Length = 257

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
 Frame = +2

Query: 149 KLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREI-----FKRAEQYVKEYRIK 313
           KLP    SVLKH             V  ++R+  IKK+        F+RAE +V  Y   
Sbjct: 10  KLPGKTVSVLKHRKRRILQDE---SVVTQKRNDRIKKRTATKNHHKFRRAESFVMGYLKA 66

Query: 314 ERDEIRLARQARNRGNYYVPGEA------KLAFVIRIRGINQVSPKVRKVLQLFRLRQIN 475
           ER   R+ +            +A      KL FV+R  G          + +  R+   +
Sbjct: 67  ERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKKIFDKTTADIFRTLRMGSRH 126

Query: 476 NGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 595
           N VF+   K    +LR+ EP++ +G P+L S+RELV+K+G
Sbjct: 127 NAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKG 166


>BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p
           protein.
          Length = 257

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
 Frame = +2

Query: 149 KLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREI-----FKRAEQYVKEYRIK 313
           KLP    SVLKH             V  ++R+  IKK+        F+RAE +V  Y   
Sbjct: 10  KLPGKTVSVLKHRKRRILQDE---SVVTQKRNDRIKKRTATKNHHKFRRAESFVMGYLKA 66

Query: 314 ERDEIRLARQARNRGNYYVPGEA------KLAFVIRIRGINQVSPKVRKVLQLFRLRQIN 475
           ER   R+ +            +A      KL FV+R  G          + +  R+   +
Sbjct: 67  ERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKKIFDKTTADIFRTLRMGSRH 126

Query: 476 NGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 595
           N VF+   K    +LR+ EP++ +G P+L S+RELV+K+G
Sbjct: 127 NAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKG 166


>AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA
           protein.
          Length = 257

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
 Frame = +2

Query: 149 KLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREI-----FKRAEQYVKEYRIK 313
           KLP    SVLKH             V  ++R+  IKK+        F+RAE +V  Y   
Sbjct: 10  KLPGKTVSVLKHRKRRILQDE---SVVTQKRNDRIKKRTATKNHHKFRRAESFVMGYLKA 66

Query: 314 ERDEIRLARQARNRGNYYVPGEA------KLAFVIRIRGINQVSPKVRKVLQLFRLRQIN 475
           ER   R+ +            +A      KL FV+R  G          + +  R+   +
Sbjct: 67  ERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKKIFDKTTADIFRTLRMGSRH 126

Query: 476 NGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 595
           N VF+   K    +LR+ EP++ +G P+L S+RELV+K+G
Sbjct: 127 NAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKG 166


>AY051415-1|AAK92839.1|  382|Drosophila melanogaster GH09360p
           protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 218 LQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYV-PGEAKLAF 394
           L++ LK++    +KKR I    E+ ++ +  +  +    ARQ R      V P E + A 
Sbjct: 310 LKIYLKQKQYGRRKKRRIVDYTEENIRNFMHRNNNSAAAARQERLPEQRPVPPAERRDAV 369

Query: 395 VIRIRG 412
           + R RG
Sbjct: 370 ITRQRG 375


>AE014297-77|AAF52133.1|  382|Drosophila melanogaster CG9855-PA
           protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 218 LQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYV-PGEAKLAF 394
           L++ LK++    +KKR I    E+ ++ +  +  +    ARQ R      V P E + A 
Sbjct: 310 LKIYLKQKQYGRRKKRRIVDYTEENIRNFMHRNNNSAAAARQERLPEQRPVPPAERRDAV 369

Query: 395 VIRIRG 412
           + R RG
Sbjct: 370 ITRQRG 375


>AE014297-4130|AAF56715.1|  448|Drosophila melanogaster CG13972-PA
           protein.
          Length = 448

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/38 (28%), Positives = 24/38 (63%)
 Frame = +2

Query: 221 QVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRL 334
           ++ +  +   ++K +EI++    YV+EYR ++ +E RL
Sbjct: 367 ELRILEQKKLLQKHKEIYEERMTYVQEYRAQKEEEQRL 404


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,235,833
Number of Sequences: 53049
Number of extensions: 452534
Number of successful extensions: 1157
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)