Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p07
(670 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g18110.1 68415.m02105 elongation factor 1-beta, putative / EF... 119 2e-27
At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta id... 117 8e-27
At5g19510.1 68418.m02324 elongation factor 1B alpha-subunit 2 (e... 116 1e-26
At5g12110.1 68418.m01422 elongation factor 1B alpha-subunit 1 (e... 114 6e-26
At2g40660.1 68415.m05017 tRNA-binding region domain-containing p... 35 0.056
At1g70330.1 68414.m08091 equilibrative nucleoside transporter fa... 31 0.69
At5g64960.1 68418.m08171 cyclin-dependent kinase, putative / CDK... 30 1.6
At5g38990.1 68418.m04717 protein kinase family protein contains ... 29 3.7
At5g08415.1 68418.m00991 lipoic acid synthase family protein sim... 29 3.7
At2g05170.1 68415.m00544 vacuolar protein sorting 11 family prot... 28 4.9
At5g38040.1 68418.m04584 UDP-glucoronosyl/UDP-glucosyl transfera... 28 6.5
At5g39000.1 68418.m04718 protein kinase family protein contains ... 27 8.5
At3g46390.1 68416.m05029 hypothetical protein 27 8.5
At2g36190.1 68415.m04442 beta-fructosidase, putative / beta-fruc... 27 8.5
At2g34400.1 68415.m04215 pentatricopeptide (PPR) repeat-containi... 27 8.5
At1g04400.2 68414.m00431 cryptochrome 2 apoprotein (CRY2) / blue... 27 8.5
At1g04400.1 68414.m00430 cryptochrome 2 apoprotein (CRY2) / blue... 27 8.5
>At2g18110.1 68415.m02105 elongation factor 1-beta, putative /
EF-1-beta, putative nearly identical to eEF-1beta
[Arabidopsis thaliana] GI:398606
Length = 231
Score = 119 bits (286), Expect = 2e-27
Identities = 73/196 (37%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Frame = +2
Query: 71 AVGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQI-- 244
A ++ + GL L+++L +SY++GY S+ D+ VF + K P + +V RW+N I
Sbjct: 3 AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDA 62
Query: 245 ---ASYTPAERK-TWSQGTSPLXXXXXXXXXXXXXXXXXXXX-----VDLFGSGXXXXXX 397
S AE +G+SP+ VDLFG
Sbjct: 63 LLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKK 122
Query: 398 XXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWG 577
+A + K S K KSS+L+D+KPWDDETDMK++E VR+I+MEGL WG
Sbjct: 123 AAEE------RAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWG 176
Query: 578 ASKLVPVGYGINKLQL 625
ASKLVPVGYGI KL +
Sbjct: 177 ASKLVPVGYGIKKLHI 192
>At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta
identical to SP|P48006 Elongation factor 1-beta
(EF-1-beta) {Arabidopsis thaliana}
Length = 231
Score = 117 bits (281), Expect = 8e-27
Identities = 72/196 (36%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Frame = +2
Query: 71 AVGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQI-- 244
A ++ + GL L+++L +SY++GY S+ D+ VF + K P + + RWYN I
Sbjct: 3 AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDA 62
Query: 245 ---ASYTPAERK-TWSQGTSPLXXXXXXXXXXXXXXXXXXXX-----VDLFGSGXXXXXX 397
S AE +G++P+ VDLFG
Sbjct: 63 LLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKK 122
Query: 398 XXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWG 577
+A + K S K KSS+L+D+KPWDDETDMK++E V++I+MEGL WG
Sbjct: 123 AAEE------RAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWG 176
Query: 578 ASKLVPVGYGINKLQL 625
ASKLVPVGYGI KLQ+
Sbjct: 177 ASKLVPVGYGIKKLQI 192
>At5g19510.1 68418.m02324 elongation factor 1B alpha-subunit 2
(eEF1Balpha2) identical to elongation factor 1B
alpha-subunit [Arabidopsis thaliana] GI:6686821
Length = 224
Score = 116 bits (280), Expect = 1e-26
Identities = 68/185 (36%), Positives = 92/185 (49%), Gaps = 3/185 (1%)
Frame = +2
Query: 80 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 259
D+ T +G+ + ++LA K+Y+SG S DV+V+ V P+ P+ +WY +AS
Sbjct: 7 DLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLA 66
Query: 260 AE---RKTWSQGTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXXLK 430
+ Q +DLFG +
Sbjct: 67 KSFPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKAAEE------R 120
Query: 431 AYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGI 610
A K +KKP KSS+L+DVKPWDDETDMK++E VR +EM GL WGASKLVPVGYGI
Sbjct: 121 EAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGI 180
Query: 611 NKLQL 625
KL +
Sbjct: 181 KKLTI 185
>At5g12110.1 68418.m01422 elongation factor 1B alpha-subunit 1
(eEF1Balpha1) identical to elongation factor 1B
alpha-subunit [Arabidopsis thaliana] GI:6686819
Length = 228
Score = 114 bits (274), Expect = 6e-26
Identities = 68/192 (35%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Frame = +2
Query: 80 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 259
D+ T +GL L ++LA K+Y+SG S DV+V+ V + P P+ +WY+ +AS+
Sbjct: 7 DLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLA 66
Query: 260 AERKTWSQGTS-------PLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXX 418
+ G P +DLF
Sbjct: 67 KSFPGKADGVRVGGGVAPPSEAHPHTEEPAADGDGDDDDDIDLFADETEDEKKAAEE--- 123
Query: 419 XXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPV 598
+ A K +KK KSS+LL+VKPWDDETDMK++E VR+++M GL WGASKLVPV
Sbjct: 124 ---REAAKKDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPV 180
Query: 599 GYGINKLQLCVS 634
GYGI KL + ++
Sbjct: 181 GYGIKKLTIMMT 192
>At2g40660.1 68415.m05017 tRNA-binding region domain-containing
protein similar to SP|Q12904 Multisynthetase complex
auxiliary component p43 [Contains: Endothelial-monocyte
activating polypeptide II (EMAP-II) (Small inducible
cytokine subfamily E member 1)] {Homo sapiens}; contains
Pfam profile PF01588: Putative tRNA binding domain
Length = 389
Score = 34.7 bits (76), Expect = 0.056
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Frame = +2
Query: 101 LNDLNQYLAEKSYV--SGYTPSQADVQVFEQV-------GKAPAANLPHVLRWYNQI 244
L LN LA KS + +G TPS ADV VF + + +PHV+RW N I
Sbjct: 76 LEKLNLELATKSVLLGNGLTPSAADVAVFSALHSSVLGLSDSDKEKVPHVIRWVNYI 132
>At1g70330.1 68414.m08091 equilibrative nucleoside transporter
family protein contains similarity to SWISS-PROT:Q14542
equilibrative nucleoside transporter 2 (Equilibrative
nitrobenzylmercaptopurine riboside-insensitive
nucleoside transporter, Equilibrative NBMPR-insensitive
nucleoside transporter, Nucleoside transporter, ei-type,
36 kDa nucleolar protein HNP36, Hydrophobic nucleolar
protein, 36 kDa, Delayed-early response protein 12)
[Homo sapiens]
Length = 450
Score = 31.1 bits (67), Expect = 0.69
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -1
Query: 577 SPEKAFHFNSAYLVFHFLHIGFIIPW 500
+P ++HF AY+++ L +GF++PW
Sbjct: 56 APSDSYHF--AYIIYFTLGVGFLLPW 79
>At5g64960.1 68418.m08171 cyclin-dependent kinase, putative / CDK,
putative similar to cyclin dependent kinase C
[Lycopersicon esculentum] gi|15215944|emb|CAC51391
Length = 513
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 116 QYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLR--WYNQIASYTPAERK 271
+ L K + G T ++ +++E G +N P V + WYNQ+ S P +R+
Sbjct: 233 ELLNGKPILPGKTENEQLNKIYELCGSPDESNWPGVSKMPWYNQMKSSRPLKRR 286
>At5g38990.1 68418.m04717 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 880
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 213 FPTYYDGIIKLLHTLRLNAKLGLRAPAH*PPVLNPRLPPQ 332
+PTYYD I+ + L+L+ G A + P L+P PPQ
Sbjct: 387 YPTYYDAILSGVEILKLSNSDGNLAGLNPIPQLSP--PPQ 424
>At5g08415.1 68418.m00991 lipoic acid synthase family protein
similar to lipoic acid synthase from Arabidopsis
thaliana [gi:3928758], from Mus musculus [gi:14669826]
Pfam profile PF04055: radical SAM domain protein
Length = 394
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 446 KSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWG 577
K KP +I K+SI+L + D+E +KE +R I+++ L G
Sbjct: 287 KISKPGMITKTSIMLGLGETDEE--LKEAMADLRAIDVDILTLG 328
>At2g05170.1 68415.m00544 vacuolar protein sorting 11 family protein
/ VPS11 family protein similar to Vacuolar protein
sorting 11 (hVPS11) (PP3476) (Swiss-Prot:Q9H270) [Homo
sapiens]; similar to Vacuolar biogenesis protein END1
(PEP5 protein) (Vacuolar protein sorting 11)
(Swiss-Prot:P12868) [Saccharomyces cerevisiae]
Length = 932
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +2
Query: 101 LNDLNQYLAEKSYVSGYTPSQADVQVFEQVGK 196
L DL Y YVS PSQA V + EQ GK
Sbjct: 495 LEDLGNYDEALQYVSSLEPSQAGVTI-EQYGK 525
>At5g38040.1 68418.m04584 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 449
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 536 NQVRTIEMEGLLWGASKL-VPVGYGINKLQLCVSSRTTKFL 655
N VR +EM L W +L +PV Y I L + VS+ T L
Sbjct: 211 NTVRCLEMSSLEWLQQELEIPV-YSIGPLHMVVSAPPTSLL 250
>At5g39000.1 68418.m04718 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 873
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 216 PTYYDGIIKLLHTLRLNAKLGLRAPAH*PPVLNPRLPPQQRKTTMTTTLIYLVLVT 383
P YYD I+ + L++N G A + P+++P L P + + +++ +T
Sbjct: 390 PKYYDAILNGVEILKMNDPDGNLAGPNPDPLVSPDLIPNRATPRIRKNKSHILPIT 445
>At3g46390.1 68416.m05029 hypothetical protein
Length = 69
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 425 LKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGA--SKLVPV 598
+K Y+ K K+ + +I +D+K +M + E + I M G++W S L+ V
Sbjct: 1 MKRYSTKHFKRILIANNVNIDIDLKTGIVAKNMAKKEKIEQVISMGGIMWEGLNSSLIKV 60
Query: 599 GYGINKLQL 625
+ K Q+
Sbjct: 61 DEALLKQQI 69
>At2g36190.1 68415.m04442 beta-fructosidase, putative /
beta-fructofuranosidase, putative similar to
beta-fructofuranosidase GI:18324 from [Daucus carota]
Length = 591
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 101 LNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANL 214
+N+ + + ++ V G TP+QADV+V VG A +
Sbjct: 386 MNNHDIKMGQRIEVKGITPAQADVEVTFYVGSLEKAEI 423
>At2g34400.1 68415.m04215 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 617
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +2
Query: 467 IAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLW 574
+ S++L D+K WD+ M+ + ++ G W
Sbjct: 535 VISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSW 570
>At1g04400.2 68414.m00431 cryptochrome 2 apoprotein (CRY2) / blue
light photoreceptor (PHH1) 97% identical to photolysase
(PHH1) (SP:Q96524) and cryptochrome 2 apoprotein (CRY2)
(SP:U43397). ESTs gb|W43661 and gb|Z25638 come from this
gene; contains Pfam profiles PF03441: FAD binding domain
of DNA photolyase and PF00875: deoxyribodipyrimidine
photolyase; identical to cDNA Cvi cryptochrome 2 (CRY2)
GI:18026275
Length = 612
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 500 PWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQLCVSSRTTKFLLI 661
PWD + D + Q RT + G +L G+ N++++ VSS KFLL+
Sbjct: 320 PWDADVDKFKAWRQGRT-GYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLL 372
>At1g04400.1 68414.m00430 cryptochrome 2 apoprotein (CRY2) / blue
light photoreceptor (PHH1) 97% identical to photolysase
(PHH1) (SP:Q96524) and cryptochrome 2 apoprotein (CRY2)
(SP:U43397). ESTs gb|W43661 and gb|Z25638 come from this
gene; contains Pfam profiles PF03441: FAD binding domain
of DNA photolyase and PF00875: deoxyribodipyrimidine
photolyase; identical to cDNA Cvi cryptochrome 2 (CRY2)
GI:18026275
Length = 612
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 500 PWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQLCVSSRTTKFLLI 661
PWD + D + Q RT + G +L G+ N++++ VSS KFLL+
Sbjct: 320 PWDADVDKFKAWRQGRT-GYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLL 372
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,808,450
Number of Sequences: 28952
Number of extensions: 274005
Number of successful extensions: 813
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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