Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p05
(745 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 104 1e-22
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 90 3e-18
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 78 1e-14
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 72 1e-12
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 67 2e-11
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 61 1e-09
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 58 2e-08
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 57 3e-08
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 55 9e-08
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 54 3e-07
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 53 4e-07
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 48 1e-05
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 48 1e-05
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 47 3e-05
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 46 4e-05
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 46 5e-05
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 46 5e-05
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 45 1e-04
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 40 0.003
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 34 0.24
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 34 0.24
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 34 0.24
M62472-1|AAA62769.1| 679|Drosophila melanogaster recombination ... 32 0.95
AY118605-1|AAM49974.1| 679|Drosophila melanogaster LP05366p pro... 32 0.95
AF073994-2|AAC27621.1| 679|Drosophila melanogaster recombinatio... 32 0.95
AE014134-522|AAF51175.1| 679|Drosophila melanogaster CG3178-PA ... 32 0.95
AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone rece... 29 8.8
AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ... 29 8.8
AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC... 29 8.8
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 104 bits (250), Expect = 1e-22
Identities = 75/227 (33%), Positives = 111/227 (48%), Gaps = 5/227 (2%)
Frame = -1
Query: 694 TTLQWNCRSINSKKSDIYHLINLYKPVIIAIQETWLKPGYNFKVS-QYLCVREDRTDGYA 518
T +QWN + + S + LI Y P II++QET ++ N Y + T+ +
Sbjct: 4 TIIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQYTNNIPTPINYKLLTNIATNRFG 63
Query: 517 GVALLVHNTIPFDHIPIANHSIDFSIIAVSIN---KICFVSVYIPHPTSSIFDE-IEVII 350
GV LLVH +I H + N +ID IA++I K+ S YI PT +I ++ +
Sbjct: 64 GVRLLVHKSI--QHT-VLNITIDIEAIAINIESKLKLNIFSTYIS-PTKNITNQTLHNTF 119
Query: 349 SQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQPHEGIS 170
+ P LI GDFN H WGS ++ G +D+ + +LN T + H +
Sbjct: 120 NIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFST-HNTYT 178
Query: 169 APDLSLTTPGLASLLTWKTLSSTYDSDHYPILITLPKKLVRTKFRRP 29
DL+L +P LA WK L+ + SDH+PI+ TL KF RP
Sbjct: 179 HIDLTLCSPILAPHAKWKILNDLHGSDHFPIITTLFPTTNPQKFYRP 225
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 89.8 bits (213), Expect = 3e-18
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 6/214 (2%)
Frame = -1
Query: 694 TTLQWNCRSINSKKSDIYHLINLYKPVIIAIQETWLK-PGYNF----KVSQYLCVREDRT 530
T LQWN I + +++ LI + P I+ +QET L NF + S Y T
Sbjct: 4 TILQWNIHGIFNNYNELTLLIKDHAPDIVFLQETKLPCNSTNFICPKEYSGYFHNFSYNT 63
Query: 529 DGYAGVALLVHNTIPFDHIPIANHSIDFSIIAVSINKIC-FVSVYIPHPTSSIFDEIEVI 353
G+ +L+ +P + I N SI S + ++ ++ V+ YIP +I I
Sbjct: 64 SAKQGIGVLIKRNVPHTYRNI-NSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISEI 122
Query: 352 ISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQPHEGI 173
+ L ++LGD N+ WGS ++ G +I ++ N+ +LN G T H
Sbjct: 123 LQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPT-HLSTHNTF 181
Query: 172 SAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILI 71
+ D+SL +P +A + +W + + SDH+PI I
Sbjct: 182 THIDISLISPQIAHMCSWSISDNLHGSDHFPITI 215
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 78.2 bits (184), Expect = 1e-14
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 22/241 (9%)
Frame = -1
Query: 703 DPSTTLQWNCRSINSKKSDIYHLINLYKPVIIAIQETWLKPGYNFKVSQYLCVREDRTDG 524
D + WN R++ +K+ ++ + I I ETWL F + +Y R DR +
Sbjct: 10 DNLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRFNIPEYTIYRNDRKES 69
Query: 523 Y-AGVALLVHNTIPFDHIP-IANHSID---FSIIAVSINKICFVSVYIPHPTS------- 380
GVA+ V NT+ + IP I +H I+ I S + + S+Y TS
Sbjct: 70 RGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSIYFAGNTSKCIPSSC 129
Query: 379 ----------SIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNN 230
S++ + ISQ+ LI GDFN++H+AW T ++ +G + ++ D
Sbjct: 130 DLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGK 189
Query: 229 FCILNTGVATRRTQPHEGISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITLPKKLV 50
F IL T H+ A L L + + L + SDH P++I +
Sbjct: 190 FSILYPTQPTYIPHNHKA-KASTLDLCLTNIPNQLANPAVMQELSSDHLPVVIKYSTNFM 248
Query: 49 R 47
R
Sbjct: 249 R 249
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 71.7 bits (168), Expect = 1e-12
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 6/218 (2%)
Frame = -1
Query: 700 PSTTLQWNCRSINSKKSDIYHLINLYKPVIIAIQETWLKPGYNFKVSQYLC-VREDRTDG 524
P L WN +++K ++ + ++ ++ + ET K K+ ++ D + G
Sbjct: 3 PLRILVWNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGAETPKLFGFVAYTANDPSGG 62
Query: 523 YA--GVALLVHNTIP-FDHIPIANHSIDFS--IIAVSINKICFVSVYIPHPTSSIFDEIE 359
A G A+L+ N++ F PIA + + +I ++ I F +VY P + DE +
Sbjct: 63 NAKGGAAILIKNSLAHFPLTPIATAKVQLAPAVIETALGPISFGAVYCPPRFAWTTDEFK 122
Query: 358 VIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQPHE 179
I+ + ++ GD+NA H WG+ S+ G + +++ ++ L TG TR
Sbjct: 123 DILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCR 182
Query: 178 GISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 65
G T G+ + + SDH P++ITL
Sbjct: 183 GSPGYIDFALTKGVLGIHANISAVVELSSDHLPLVITL 220
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 67.3 bits (157), Expect = 2e-11
Identities = 62/221 (28%), Positives = 92/221 (41%), Gaps = 8/221 (3%)
Frame = -1
Query: 703 DPSTTLQWNCRSINSKKSDIYHLINLYKPVIIAIQETWLKPGYNFKVSQYLCVREDR--- 533
+P L WN I+ K D+ + K I+ + E LK G K+ Y R
Sbjct: 2 NPLKILIWNANGISRKAKDVELFAHNKKVDILLVTELRLKRGETVKIYGYAYYPAYRPSL 61
Query: 532 -TDGYAGVALLVHNTIP-FDHIPIANHSIDFSIIAVS--INKICFVSVYIPHPTSSIFDE 365
+ GVA+ V T+ F I I S + V+ + + F ++Y T
Sbjct: 62 NNNSVGGVAVFVRTTLRHFPQRVIETRHIQLSSVKVATGLGDLQFSAIYCSPSTRIEERH 121
Query: 364 IEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQ- 188
II + L+ GD+NA+H WG T +S G + + L IL TG TR
Sbjct: 122 FTDIIRACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYV 181
Query: 187 PHEGISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 65
P S D ++ G+ L T S DSDH P++I++
Sbjct: 182 PSHTPSCIDFAV-YHGIPDHLATITQSWDLDSDHLPLIISI 221
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 61.3 bits (142), Expect = 1e-09
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 6/228 (2%)
Frame = -1
Query: 682 WNCRSINSKKSDIYHLINLYKPVIIAIQETWLKPGYNFKVSQYLCVREDRTDGYA--GVA 509
WN R + ++ ++ + ++ ET ++ G + YL G + G A
Sbjct: 11 WNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRIYLPGYLMYHAHHPSGNSRGGSA 70
Query: 508 LLVHNTI---PFDHIPIANHSIDFSIIAVSINKICFVSVYIPHPTSSIFDEIEVIISQLP 338
+++ + + P I + I + S+ + +VY+P I D+ + + + L
Sbjct: 71 VIIKSRLCHSPLTPISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKSMFAALG 130
Query: 337 KPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRT-QPHEGISAPD 161
+ GD+NA+H WG+ S G + +++ + +L TG T + P SA D
Sbjct: 131 NKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLLTPSALD 190
Query: 160 LSLTTPGLASLLTWKTLSSTYDSDHYPILITLPKKLVRTKFRRPPRLK 17
+T L +TL SDH PIL L T ++P R++
Sbjct: 191 FFITCGYGMGRLDVQTLQE-LSSDHLPILAVLH----ATPLKKPQRVR 233
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 57.6 bits (133), Expect = 2e-08
Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 22/197 (11%)
Frame = -1
Query: 571 FKVSQYLCVREDRTDGYAG-VALLVHNTIPFDHIP-IANHSID---FSIIAVSINKICFV 407
F + +Y R DR + G VA+ V NT+ + IP I +H I+ I S + +
Sbjct: 2 FNIPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIY 61
Query: 406 SVYIPHPTS-----------------SIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTN 278
S+Y TS S++ + ISQ+ LI GDFN++H+AW T
Sbjct: 62 SIYFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTR 121
Query: 277 SSYYGARILDILDSNNFCILNTGVATRRTQPHEGISAPDLSLTTPGLASLLTWKTLSSTY 98
++ +G + ++ D F IL T H+ A L L + + L +
Sbjct: 122 ANGWGKILNELSDLGKFSILYPTQPTYIPHNHKA-KASTLDLCLTNIPNQLANPAVMQEL 180
Query: 97 DSDHYPILITLPKKLVR 47
SDH P++I +R
Sbjct: 181 SSDHLPVVIKYSTNFMR 197
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 56.8 bits (131), Expect = 3e-08
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 8/235 (3%)
Frame = -1
Query: 682 WNCRSINSKKSDIYHLINLYKPVIIAIQETWLKPGYNFKVSQYLCVREDRTDGYA--GVA 509
WN ++ ++ I ++ + ET L NF + YL + DG A G
Sbjct: 9 WNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKNNFHIPGYLFYGTNHPDGKAHGGTG 68
Query: 508 LLVHNTIPFDHIP-IANHSIDFSIIAVSINK--ICFVSVYIPHPTSSIFDEIEVIISQLP 338
+L+ N I H+ + + + IA+ +N +VY P D+ + L
Sbjct: 69 ILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPPRFPISEDQFMEFFNTLG 128
Query: 337 KPVLILGDFNAQHQAWGSTNSSYYGARILDIL--DSNNFCILNTGVATR-RTQPHEGISA 167
+ GD+NA+H WGS S G ++ + L N ++ G T P +
Sbjct: 129 DRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDL 188
Query: 166 PDLSLTTPGLASLLTWKTLSSTYDSDHYPILITLPKKLVRTKFRRPPRLKYKICN 2
D ++T +++T + L+ SDH P+ + + L R PP Y++ N
Sbjct: 189 IDFAITKHVPRNMVTAEALAD-LSSDHSPVFLNM---LTRPHIVDPP---YRLTN 236
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 55.2 bits (127), Expect = 9e-08
Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 8/235 (3%)
Frame = -1
Query: 682 WNCRSINSKKSDIYHLINLYKPVIIAIQETWLKPGYNFKVSQYLCVREDRTDGYA--GVA 509
WN ++ ++ I ++ + ET L NF + YL + DG A G
Sbjct: 9 WNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKNNFHIPGYLFYGTNHPDGKAHGGTG 68
Query: 508 LLVHNTIPFDHIP-IANHSIDFSIIAVSINK--ICFVSVYIPHPTSSIFDEIEVIISQLP 338
+L+ N I H+ + + + IA+ +N +VY P D+ + L
Sbjct: 69 ILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPPRFPISEDQFMEFFNTLG 128
Query: 337 KPVLILGDFNAQHQAWGSTNSSYYGARILDIL--DSNNFCILNTGVATR-RTQPHEGISA 167
+ GD+NA+H WGS + G ++ + L N ++ G T P +
Sbjct: 129 DRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDL 188
Query: 166 PDLSLTTPGLASLLTWKTLSSTYDSDHYPILITLPKKLVRTKFRRPPRLKYKICN 2
D ++T +++T + L+ SDH P+ + + L R PP Y++ N
Sbjct: 189 IDFAITKHVPRNMVTAEALAD-LSSDHSPVFLNM---LTRHHIVDPP---YRLTN 236
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 53.6 bits (123), Expect = 3e-07
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 5/166 (3%)
Frame = -1
Query: 682 WNCRSINSKKSDIYHLINLYKPVIIAIQETWLKPGYNFKVSQYLCVREDRTDGYA--GVA 509
WN R + ++ ++ + ++ ET ++ G + YL G + G A
Sbjct: 11 WNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRIYLPGYLMYHAHHPSGNSRGGSA 70
Query: 508 LLVHNTI---PFDHIPIANHSIDFSIIAVSINKICFVSVYIPHPTSSIFDEIEVIISQLP 338
+++ + + P I + I + S+ + +VY+P I D+ + + + L
Sbjct: 71 VIIKSRLCHSPLTPISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKSMFAALG 130
Query: 337 KPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVAT 200
+ GD+NA+H WG+ S G + +++ + +L TG T
Sbjct: 131 NKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPT 176
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 53.2 bits (122), Expect = 4e-07
Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 8/214 (3%)
Frame = -1
Query: 682 WNCRSINSKKSDIYHLINLYKPVIIAIQETWLKPGYNFKVSQYLCVREDRTDG--YAGVA 509
WN ++ +K ++ ++ ++ + ET L YNF++ Y + DG + G A
Sbjct: 9 WNANGVSQRKLELAQFLHEKHIDVMLLSETHLTSKYNFQIRDYHFYGTNHPDGKAHGGTA 68
Query: 508 LLVHNTIPFD-HIPIANHSIDFSIIAVSINK---ICFVSVYIPHPTSSIFDEIEVIISQL 341
+L+ N + + A + + + I + ++ + +VY P + + + L
Sbjct: 69 ILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQFLDFFQAL 128
Query: 340 PKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQPHEGISAPD 161
+ GD+NA+H WGS + G ++ + + + + P + PD
Sbjct: 129 GPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLNKLPD 188
Query: 160 L--SLTTPGLASLLTWKTLSSTYDSDHYPILITL 65
L T ++ L SDH P+LI L
Sbjct: 189 LIDFAVTKNISRSLVKAECLPDLSSDHSPVLIHL 222
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 48.0 bits (109), Expect = 1e-05
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 21/227 (9%)
Frame = -1
Query: 682 WNCRSINSKKSDI-YHLINLYKPVIIAIQETWLKPGYNFKVSQYLC--VREDRTDGYAGV 512
WN IN+K ++ ++N+ ++I + ++ Y + + GV
Sbjct: 15 WNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKRGGV 74
Query: 511 ALLVHNTIPFDHI-PIANHSIDFS-IIAVSINK-----ICFVSVYIP-------HPTSSI 374
A +V+++I + PI I + I+ + N I SVY P H + +
Sbjct: 75 ATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHFTDV 134
Query: 373 FDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-ILNTGVATR 197
+ E + K +L GD+NA+H+ WG T + G + + + ++ I+ TG AT
Sbjct: 135 LNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATH 193
Query: 196 RTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 65
PH+ SA D S+ GL L + S+ SDH PIL+ +
Sbjct: 194 --FPHDTRKNPSAIDFSI-CKGLGRLEKRISSSADLSSDHLPILLEI 237
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 48.0 bits (109), Expect = 1e-05
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 21/227 (9%)
Frame = -1
Query: 682 WNCRSINSKKSDI-YHLINLYKPVIIAIQETWLKPGYNFKVSQYLC--VREDRTDGYAGV 512
WN IN+K ++ ++N+ ++I + ++ Y + + GV
Sbjct: 15 WNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKRGGV 74
Query: 511 ALLVHNTIPFDHI-PIANHSIDFS-IIAVSINK-----ICFVSVYIP-------HPTSSI 374
A +V+++I + PI I + I+ + N I SVY P H + +
Sbjct: 75 ATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHFTDV 134
Query: 373 FDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-ILNTGVATR 197
+ E + K +L GD+NA+H+ WG T + G + + + ++ I+ TG AT
Sbjct: 135 LNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATH 193
Query: 196 RTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 65
PH+ SA D S+ GL L + S+ SDH PIL+ +
Sbjct: 194 --FPHDTRKNPSAIDFSI-CKGLGRLEKRISSSADLSSDHLPILLEI 237
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 46.8 bits (106), Expect = 3e-05
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Frame = -1
Query: 682 WNCRSINSKKSDI-YHLINLYKPVIIAIQETWLKPGYNFKVSQYLC--VREDRTDGYAGV 512
WN IN+K ++ ++N+ ++I + ++ Y + + GV
Sbjct: 15 WNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKRGGV 74
Query: 511 ALLVHNTIPFDHI-PIANHSIDFS-IIAVSINK-----ICFVSVYIP-------HPTSSI 374
A +V+++I + PI I + I+ + N I SVY P H + +
Sbjct: 75 ATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHFTDV 134
Query: 373 FDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-ILNTGVATR 197
+ E + K +L GD+NA+H+ WG T + G + + + ++ I+ TG AT
Sbjct: 135 LNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATH 193
Query: 196 RTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYD--SDHYPILITL 65
PH+ SA D S+ GL L K +SS D SDH PIL+ +
Sbjct: 194 --FPHDTRKNPSAIDFSI-CKGLGRL--EKRISSVADLSSDHLPILLEI 237
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 46.4 bits (105), Expect = 4e-05
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 21/227 (9%)
Frame = -1
Query: 682 WNCRSINSKKSDI-YHLINLYKPVIIAIQETWLKPGYNFKVSQYLC--VREDRTDGYAGV 512
WN IN+K ++ ++N+ +II + ++ Y + + GV
Sbjct: 15 WNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPVSSKRGGV 74
Query: 511 ALLVHNTIPFDHI-PIANHSIDFS-IIAVSINK-----ICFVSVY-------IPHPTSSI 374
A +V+++I + PI I + I+ + N I SVY +PH + +
Sbjct: 75 ATIVNSSIRHMALKPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLRWLPHHFTDV 134
Query: 373 FDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-ILNTGVATR 197
+ E + K +L GD+NA+H+ WG T + G + + + +++ I+ TG AT
Sbjct: 135 LNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADSTAEIIATGCATH 193
Query: 196 RTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 65
PH+ SA D S+ GL + + SDH PIL+ +
Sbjct: 194 --FPHDTRKNPSAIDFSI-CKGLGRFEKRISSGADLSSDHLPILLEI 237
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 46.0 bits (104), Expect = 5e-05
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -1
Query: 394 PHPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 218
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 12 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 70
Query: 217 NTGVATRRTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 65
TG AT PH+ SA D S+ GL L + S+ SDH PIL+ +
Sbjct: 71 ATGCATH--FPHDTRKNPSAIDFSI-CKGLGRLEKRISSSADLSSDHLPILLEI 121
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 46.0 bits (104), Expect = 5e-05
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -1
Query: 394 PHPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 218
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 90 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 148
Query: 217 NTGVATRRTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 65
TG AT PH+ SA D S+ GL L + S+ SDH PIL+ +
Sbjct: 149 ATGCATH--FPHDTRKNPSAIDFSI-CKGLGRLEKRISSSADLSSDHLPILLEI 199
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 44.8 bits (101), Expect = 1e-04
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 21/227 (9%)
Frame = -1
Query: 682 WNCRSINSKKSDI-YHLINLYKPVIIAIQETWLKPGYNFKVSQYLC--VREDRTDGYAGV 512
WN IN+K ++ ++N+ +II + ++ Y + + GV
Sbjct: 27 WNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPASSKRGGV 86
Query: 511 ALLVHNTIPFDHI-PIANHSIDFS-IIAVSINK-----ICFVSVYIP-------HPTSSI 374
A +V++++ + PI I + I+ + N I SVY P H + +
Sbjct: 87 ATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHFTDV 146
Query: 373 FDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-ILNTGVATR 197
+ E + K +++ GD+NA+H+ WG + GA + D + +++ I+ TG AT
Sbjct: 147 LNFAEKTMGGQTK-LILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSATH 205
Query: 196 RTQPHEGISAP---DLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 65
PH+ +P D S+ L + S+ SDH PIL+ +
Sbjct: 206 --FPHDTRKSPSAIDFSI-CKRLGRYEKRISSSAHLSSDHLPILLEI 249
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 40.3 bits (90), Expect = 0.003
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Frame = -1
Query: 442 IIAVSINKICFVSVYIPHPTS--SIFDEIEVIISQLP--KPVLILGDFNAQHQAWGSTNS 275
I I I F S Y P S D +E +++ +P +I GD NA WGS S
Sbjct: 79 IAYAKIRGIHFYSCYAPPSDSPEQFEDMLEKLVNHASGRRPTVIGGDLNAWATEWGSRIS 138
Query: 274 SYYGARILDILDSNNFCILNTGVATRRTQPHEGISAPDLSLTTPGLASLLTWKTLSSTYD 95
+ G ++D ++ + +LN G G S D++ + L + W
Sbjct: 139 NTRGRAVIDAMNLLDLVLLNDGFKPTFNN-DRGTSFIDVTFVSRVLVAGSNWMVHEDITL 197
Query: 94 SDHYPILITLPKKLVR 47
SDH LIT + +R
Sbjct: 198 SDHN--LITFGARTMR 211
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.9 bits (74), Expect = 0.24
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = -1
Query: 382 SSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARI-LDILDSNNFCILNTGV 206
S +F+ E+++ K +L GD+N +H+ WG+ S G + IL + I+ TG
Sbjct: 136 SKLFNHFEMLLDGKSKFILG-GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGH 194
Query: 205 ATR-RTQPHEGISAPDLSLTTP-GLASLLTWKTLSSTYDSDHYPILITL 65
AT + SA D ++ L T+ T SDH PI I L
Sbjct: 195 ATHFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQIVL 241
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.9 bits (74), Expect = 0.24
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = -1
Query: 382 SSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARI-LDILDSNNFCILNTGV 206
S +F+ E+++ K +L GD+N +H+ WG+ S G + IL + I+ TG
Sbjct: 136 SKLFNHFEMLLDGKSKFILG-GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGH 194
Query: 205 ATR-RTQPHEGISAPDLSLTTP-GLASLLTWKTLSSTYDSDHYPILITL 65
AT + SA D ++ L T+ T SDH PI I L
Sbjct: 195 ATHFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQIVL 241
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.9 bits (74), Expect = 0.24
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = -1
Query: 382 SSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARI-LDILDSNNFCILNTGV 206
S +F+ E+++ K +L GD+N +H+ WG+ S G + IL + I+ TG
Sbjct: 136 SKLFNHFEMLLDGKSKFILG-GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGH 194
Query: 205 ATR-RTQPHEGISAPDLSLTTP-GLASLLTWKTLSSTYDSDHYPILITL 65
AT + SA D ++ L T+ T SDH PI I L
Sbjct: 195 ATHFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQIVL 241
>M62472-1|AAA62769.1| 679|Drosophila melanogaster recombination
repair protein protein.
Length = 679
Score = 31.9 bits (69), Expect = 0.95
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Frame = -1
Query: 682 WNCRSINS-KKSDIYHLINLYKPVIIAIQETWLK-----------PGYNFKVSQYLCVRE 539
WN + + K D LI+L +P I +QET PGY+ +LC+
Sbjct: 432 WNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYH---PYWLCM-- 486
Query: 538 DRTDGYAGVALLVHNTIPFDHIP--IANHSIDF--SIIAVSINKICFVSVYIPHPTSSIF 371
GYAGVA +++ I H+ I N D +I K ++VY+P+ +
Sbjct: 487 --PGGYAGVA--IYSKIMPIHVEYGIGNEEFDDVGRMITAEYEKFYLINVYVPNSGRKLV 542
Query: 370 DE---------IEVIISQLP--KPVLILGDFNAQH 299
+ + + +L KPV+I GD N H
Sbjct: 543 NLEPRMRWEKLFQAYVKKLDALKPVVICGDMNVSH 577
>AY118605-1|AAM49974.1| 679|Drosophila melanogaster LP05366p
protein.
Length = 679
Score = 31.9 bits (69), Expect = 0.95
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Frame = -1
Query: 682 WNCRSINS-KKSDIYHLINLYKPVIIAIQETWLK-----------PGYNFKVSQYLCVRE 539
WN + + K D LI+L +P I +QET PGY+ +LC+
Sbjct: 432 WNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYH---PYWLCM-- 486
Query: 538 DRTDGYAGVALLVHNTIPFDHIP--IANHSIDF--SIIAVSINKICFVSVYIPHPTSSIF 371
GYAGVA +++ I H+ I N D +I K ++VY+P+ +
Sbjct: 487 --PGGYAGVA--IYSKIMPIHVEYGIGNEEFDDVGRMITAEYEKFYLINVYVPNSGRKLV 542
Query: 370 DE---------IEVIISQLP--KPVLILGDFNAQH 299
+ + + +L KPV+I GD N H
Sbjct: 543 NLEPRMRWEKLFQAYVKKLDALKPVVICGDMNVSH 577
>AF073994-2|AAC27621.1| 679|Drosophila melanogaster recombination
repair protein 1 protein.
Length = 679
Score = 31.9 bits (69), Expect = 0.95
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Frame = -1
Query: 682 WNCRSINS-KKSDIYHLINLYKPVIIAIQETWLK-----------PGYNFKVSQYLCVRE 539
WN + + K D LI+L +P I +QET PGY+ +LC+
Sbjct: 432 WNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYH---PYWLCM-- 486
Query: 538 DRTDGYAGVALLVHNTIPFDHIP--IANHSIDF--SIIAVSINKICFVSVYIPHPTSSIF 371
GYAGVA +++ I H+ I N D +I K ++VY+P+ +
Sbjct: 487 --PGGYAGVA--IYSKIMPIHVEYGIGNEEFDDVGRMITAEYEKFYLINVYVPNSGRKLV 542
Query: 370 DE---------IEVIISQLP--KPVLILGDFNAQH 299
+ + + +L KPV+I GD N H
Sbjct: 543 NLEPRMRWEKLFQAYVKKLDALKPVVICGDMNVSH 577
>AE014134-522|AAF51175.1| 679|Drosophila melanogaster CG3178-PA
protein.
Length = 679
Score = 31.9 bits (69), Expect = 0.95
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Frame = -1
Query: 682 WNCRSINS-KKSDIYHLINLYKPVIIAIQETWLK-----------PGYNFKVSQYLCVRE 539
WN + + K D LI+L +P I +QET PGY+ +LC+
Sbjct: 432 WNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYH---PYWLCM-- 486
Query: 538 DRTDGYAGVALLVHNTIPFDHIP--IANHSIDF--SIIAVSINKICFVSVYIPHPTSSIF 371
GYAGVA +++ I H+ I N D +I K ++VY+P+ +
Sbjct: 487 --PGGYAGVA--IYSKIMPIHVEYGIGNEEFDDVGRMITAEYEKFYLINVYVPNSGRKLV 542
Query: 370 DE---------IEVIISQLP--KPVLILGDFNAQH 299
+ + + +L KPV+I GD N H
Sbjct: 543 NLEPRMRWEKLFQAYVKKLDALKPVVICGDMNVSH 577
>AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone
receptor 4 protein.
Length = 1518
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 349 SQLPKPVLILGDFNAQHQAWGSTNSSYYG 263
SQLP L + +AQ Q WGS+NS+ G
Sbjct: 866 SQLPPGQLQALNLSAQQQQWGSSNSTGLG 894
>AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2
protein.
Length = 1464
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 349 SQLPKPVLILGDFNAQHQAWGSTNSSYYG 263
SQLP L + +AQ Q WGS+NS+ G
Sbjct: 811 SQLPPGQLQALNLSAQQQQWGSSNSTGLG 839
>AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC
protein.
Length = 1518
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 349 SQLPKPVLILGDFNAQHQAWGSTNSSYYG 263
SQLP L + +AQ Q WGS+NS+ G
Sbjct: 866 SQLPPGQLQALNLSAQQQQWGSSNSTGLG 894
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,917,640
Number of Sequences: 53049
Number of extensions: 690660
Number of successful extensions: 1591
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1585
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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