Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10p03
         (619 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032651-1|CAB60580.1|  681|Caenorhabditis elegans Hypothetical ...    28   4.6  
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ...    28   4.6  
EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long is...    27   8.1  
AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobuli...    27   8.1  
AC024817-50|AAP68915.1|  143|Caenorhabditis elegans L1 cam adhes...    27   8.1  
AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhes...    27   8.1  

>AL032651-1|CAB60580.1|  681|Caenorhabditis elegans Hypothetical
           protein Y6D1A.1 protein.
          Length = 681

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 400 NQEREFPKHTNKPHQNTPSSRIHQQMYR 483
           +Q RE P H+    Q  P +R++  +YR
Sbjct: 553 DQRREQPNHSRHQQQGEPKNRVNNGLYR 580


>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
           protein H11E01.3 protein.
          Length = 1464

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
 Frame = +3

Query: 315 ALTRTPAAAAELVARHVERVLARETQPQEPRTRVSQAHK---QTTP-EHTELPD-TPTDV 479
           A     AAA    A +++ ++ +E +P  PRT V +  K   +T+P +  ++PD  P ++
Sbjct: 306 AAAAATAAAIGTAAINMDTLIDKEPEPSPPRTPVLETQKTFDRTSPTDGVQVPDEVPPEI 365

Query: 480 QD 485
            D
Sbjct: 366 LD 367


>EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long isoform
            protein.
          Length = 1187

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 524  LNYDYNYVLSETYVLYICWCIRELGVFWCGLF-VCL 420
            LN DY   L E  +    W I  LGV   GLF +CL
Sbjct: 1109 LNRDYANRLKEDSLRSAAWFIAVLGVLGIGLFTICL 1144


>AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobulin
            domain-containingprotein Y54G2A.25 protein.
          Length = 1187

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 524  LNYDYNYVLSETYVLYICWCIRELGVFWCGLF-VCL 420
            LN DY   L E  +    W I  LGV   GLF +CL
Sbjct: 1109 LNRDYANRLKEDSLRSAAWFIAVLGVLGIGLFTICL 1144


>AC024817-50|AAP68915.1|  143|Caenorhabditis elegans L1 cam adhesion
           molecule homologprotein 2, isoform c protein.
          Length = 143

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 524 LNYDYNYVLSETYVLYICWCIRELGVFWCGLF-VCL 420
           LN DY   L E  +    W I  LGV   GLF +CL
Sbjct: 65  LNRDYANRLKEDSLRSAAWFIAVLGVLGIGLFTICL 100


>AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhesion
            molecule homologprotein 2, isoform a protein.
          Length = 1187

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 524  LNYDYNYVLSETYVLYICWCIRELGVFWCGLF-VCL 420
            LN DY   L E  +    W I  LGV   GLF +CL
Sbjct: 1109 LNRDYANRLKEDSLRSAAWFIAVLGVLGIGLFTICL 1144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,958,841
Number of Sequences: 27780
Number of extensions: 266241
Number of successful extensions: 1035
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)