Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p02
(761 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97016-2|ABC71840.1| 216|Caenorhabditis elegans Hypothetical pr... 128 4e-30
U97016-1|ABC71839.1| 234|Caenorhabditis elegans Hypothetical pr... 128 4e-30
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 31 0.68
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z71264-1|CAA95828.1| 998|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46812-4|CAN86624.1| 405|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL031630-18|CAA21002.1| 278|Caenorhabditis elegans Hypothetical... 29 4.8
Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical pr... 28 6.3
U41007-12|AAA82272.1| 485|Caenorhabditis elegans Nucleoside tri... 28 6.3
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 28 8.3
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 28 8.3
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 28 8.3
AF025453-1|AAK31407.1| 520|Caenorhabditis elegans Hypothetical ... 28 8.3
>U97016-2|ABC71840.1| 216|Caenorhabditis elegans Hypothetical
protein B0261.4b protein.
Length = 216
Score = 128 bits (309), Expect = 4e-30
Identities = 64/147 (43%), Positives = 93/147 (63%), Gaps = 5/147 (3%)
Frame = +1
Query: 187 TKPTQDLMEFFDAKKNWPETNIRV----GRAWKLDELRLKSNTDLHKLWYVLLKERNMLY 354
T+ + + +FFD + N+ + +R GR+W +ELRLKSN+DLHKLWYV LKERNML
Sbjct: 21 TRFSSTMKQFFDDEANFGKAELRPKHRPGRSWTAEELRLKSNSDLHKLWYVCLKERNMLI 80
Query: 355 TMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLETGETGERPVKDVINLI 534
TM+ R R PNPER+D+V E+M+ IESV+ ERN A ++LETGE+ + + +
Sbjct: 81 TMKKAHTSRARNMPNPERLDRVHETMDRIESVVHERNDAVFRLETGESAAPRKRTITSFA 140
Query: 535 GMPEKYQPSEYDTPKFMNTR-WVRPYL 612
G + Q +E+ P + + + PYL
Sbjct: 141 GFTYQKQATEHFAPPQLGQKEYETPYL 167
>U97016-1|ABC71839.1| 234|Caenorhabditis elegans Hypothetical
protein B0261.4a protein.
Length = 234
Score = 128 bits (309), Expect = 4e-30
Identities = 64/147 (43%), Positives = 93/147 (63%), Gaps = 5/147 (3%)
Frame = +1
Query: 187 TKPTQDLMEFFDAKKNWPETNIRV----GRAWKLDELRLKSNTDLHKLWYVLLKERNMLY 354
T+ + + +FFD + N+ + +R GR+W +ELRLKSN+DLHKLWYV LKERNML
Sbjct: 39 TRFSSTMKQFFDDEANFGKAELRPKHRPGRSWTAEELRLKSNSDLHKLWYVCLKERNMLI 98
Query: 355 TMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLETGETGERPVKDVINLI 534
TM+ R R PNPER+D+V E+M+ IESV+ ERN A ++LETGE+ + + +
Sbjct: 99 TMKKAHTSRARNMPNPERLDRVHETMDRIESVVHERNDAVFRLETGESAAPRKRTITSFA 158
Query: 535 GMPEKYQPSEYDTPKFMNTR-WVRPYL 612
G + Q +E+ P + + + PYL
Sbjct: 159 GFTYQKQATEHFAPPQLGQKEYETPYL 185
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 31.5 bits (68), Expect = 0.68
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Frame = +1
Query: 229 KNWPETNIRVGRAWKLDELRLKSNTDLHKLWYVLLKER--NML---------YTMEH--E 369
K W T +R+ ++++ ++ TDL K Y L + N++ YT E +
Sbjct: 743 KTWKNTTVRLFAIAQMEDNNVQMKTDLEKFLYHLRIDAAVNVIEMTDSDISDYTYERTMK 802
Query: 370 CNERVRLFPNPERIDKVEESMNNIESVIRERNIA 471
ER + N + D+ ++ N++E V RER ++
Sbjct: 803 MEERNQYLKNLNKSDRDKDIQNHLEIVTRERKLS 836
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical
protein W05B2.4 protein.
Length = 2265
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 313 KLWYVLLKERNMLYTMEHECNERVRLFPNPERI-DKVEESMNNIESVIRERNIAYYKLET 489
KLWY +LK+ + +E +L P ERI ++EE M+ E N+A
Sbjct: 99 KLWYYVLKKHPLKPRVEWSFQRVHKLSPKNERIAQELEELMDCAERYALIENVA------ 152
Query: 490 GETGERPVKDVINLIGMPEKY 552
+ ++ VKD + + EKY
Sbjct: 153 -DGYQKRVKDELARLNKIEKY 172
>Z71264-1|CAA95828.1| 998|Caenorhabditis elegans Hypothetical
protein K07G5.1 protein.
Length = 998
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -1
Query: 416 LSILSGFGNSRTLSLHSCSIV*SILRSFKSTYH---NLCKSVLDFNRN 282
LS++ N + L L SCS+ + S +H N C LD +RN
Sbjct: 243 LSVIRKSQNLKKLQLRSCSLPKDFITLLASAFHNNQNACLEYLDLSRN 290
>Z46812-4|CAN86624.1| 405|Caenorhabditis elegans Hypothetical
protein ZK675.3a protein.
Length = 405
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 719 TWLKSLLCAFLTSLWIFSLYNLLNFFTAKLLMKPCFRYGLT---QRVFINLGVSYSDG*Y 549
T+LK LL + SLW +LL F T ++ +R+G+T Q FI V DG +
Sbjct: 8 TFLK-LLFRWKGSLWKAIWKHLLIFLTMYYIINAYYRFGMTKEQQNEFIKY-VMLVDG-W 64
Query: 548 FSGIPIRFITSF 513
IP+ F+ F
Sbjct: 65 TKEIPLTFLLGF 76
>AL031630-18|CAA21002.1| 278|Caenorhabditis elegans Hypothetical
protein Y38H6C.21 protein.
Length = 278
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 604 PYLKHGFINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHL 729
P L + + L + K RR NEK HS+ +KAH FN + ++
Sbjct: 26 PILNNLTFSLLFLHKRRRKSNEK-HSDFQKAHTPIFNQLYYI 66
>Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical
protein C14A4.1 protein.
Length = 298
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +1
Query: 331 LKERNMLYT----MEHECNERVRLFPNPERIDKVEESMNNIESVIRE 459
LK+R +L T + HEC E + N E + +++ +N+ E V+RE
Sbjct: 230 LKDRLLLSTENCMVRHECAEALGAIANEECTEILKQYVNDEERVVRE 276
>U41007-12|AAA82272.1| 485|Caenorhabditis elegans Nucleoside
triphosphatase protein 1 protein.
Length = 485
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 667 EKIHSEVRKAHNRDFNHVQHLLKR--FPNLDMD 759
+K EVRK +D+N +Q KR FPN D++
Sbjct: 337 QKFTDEVRKYCQKDWNDIQDGFKRNEFPNADIE 369
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/103 (17%), Positives = 46/103 (44%)
Frame = +1
Query: 307 LHKLWYVLLKERNMLYTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLE 486
+H ++ + L E E + V + + ++ + S+++ + E+ + +YK
Sbjct: 7 IHSGHFMCSNPHDDLVQDEDEEDVEVDVVEDDDKSMEASSSVHHKNKALDEKPVTFYKFG 66
Query: 487 TGETGERPVKDVINLIGMPEKYQPSEYDTPKFMNTRWVRPYLK 615
G+T + +N + K ++ TPK+ + + +R + K
Sbjct: 67 VGKTQSIAIDVSLNKLNKCIKVAYNKMTTPKWKDFKGLRLHWK 109
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/103 (17%), Positives = 46/103 (44%)
Frame = +1
Query: 307 LHKLWYVLLKERNMLYTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLE 486
+H ++ + L E E + V + + ++ + S+++ + E+ + +YK
Sbjct: 7 IHSGHFMCSNPHDDLVQDEDEEDVEVDVVEDDDKSMEASSSVHHKNKALDEKPVTFYKFG 66
Query: 487 TGETGERPVKDVINLIGMPEKYQPSEYDTPKFMNTRWVRPYLK 615
G+T + +N + K ++ TPK+ + + +R + K
Sbjct: 67 VGKTQSIAIDVSLNKLNKCIKVAYNKMTTPKWKDFKGLRLHWK 109
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/103 (17%), Positives = 46/103 (44%)
Frame = +1
Query: 307 LHKLWYVLLKERNMLYTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLE 486
+H ++ + L E E + V + + ++ + S+++ + E+ + +YK
Sbjct: 7 IHSGHFMCSNPHDDLVQDEDEEDVEVDVVEDDDKSMEASSSVHHKNKALDEKPVTFYKFG 66
Query: 487 TGETGERPVKDVINLIGMPEKYQPSEYDTPKFMNTRWVRPYLK 615
G+T + +N + K ++ TPK+ + + +R + K
Sbjct: 67 VGKTQSIAIDVSLNKLNKCIKVAYNKMTTPKWKDFKGLRLHWK 109
>AF025453-1|AAK31407.1| 520|Caenorhabditis elegans Hypothetical
protein C08F1.4a protein.
Length = 520
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +1
Query: 169 KRDFHTTKPTQDLMEFFDAKKNWPETNIRVGRAWKLDELR 288
+R F+ T ++ F D +K W T +R W++ R
Sbjct: 192 ERCFYITCKVNNVSRFQDGEKQWGNTELRYDIPWRIQTKR 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,992,384
Number of Sequences: 27780
Number of extensions: 413443
Number of successful extensions: 1536
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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