Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10p01
(274 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g10370.1 68416.m01243 glycerol-3-phosphate dehydrogenase, put... 28 0.77
At3g13760.1 68416.m01736 DC1 domain-containing protein contains ... 27 2.3
At5g49670.1 68418.m06150 hypothetical protein 26 3.1
At4g19710.2 68417.m02895 bifunctional aspartate kinase/homoserin... 26 3.1
At4g19710.1 68417.m02894 bifunctional aspartate kinase/homoserin... 26 3.1
At3g14540.1 68416.m01842 terpene synthase/cyclase family protein... 26 4.1
At1g22100.1 68414.m02763 hypothetical protein 25 5.4
At4g28880.1 68417.m04127 casein kinase, putative similar to simi... 25 7.2
At4g23230.1 68417.m03350 protein kinase family protein contains ... 25 7.2
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 25 7.2
At1g66830.1 68414.m07596 leucine-rich repeat transmembrane prote... 25 7.2
At4g28100.1 68417.m04031 expressed protein 25 9.5
At1g03930.1 68414.m00378 protein kinase (ADK1) identical to dual... 25 9.5
>At3g10370.1 68416.m01243 glycerol-3-phosphate dehydrogenase,
putative similar to glycerol-3-phosphate dehydrogenase
GB:BAA08926 from Mus musculus [SP|Q64521], Homo sapiens
[GI:1020315], Rattus norvegicus [SP|P35571]; contains
Pfam profile PF01266 FAD dependent oxidoreductase
Length = 629
Score = 28.3 bits (60), Expect = 0.77
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 50 ESQLKGLAKYFNSQTNRGRLNTARA-TYAVMGAVIL 154
+ L+G Y++ Q N RLN A T A+ GA +L
Sbjct: 217 DKNLRGTVVYYDGQMNDSRLNVGLACTAALAGAAVL 252
>At3g13760.1 68416.m01736 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 220 YRNMLINFACNSFLGFRFQCEVK 152
YRNM + +F GFR++C K
Sbjct: 422 YRNMHCSTCSRAFTGFRYKCSEK 444
>At5g49670.1 68418.m06150 hypothetical protein
Length = 1184
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 138 ITAYVALAVFNLPLFV*LLKYFAKPLSW 55
+ A++ + +F + LFV LL F K L W
Sbjct: 1 MAAFLVMFIFTIALFVALLWVFFKSLPW 28
>At4g19710.2 68417.m02895 bifunctional aspartate kinase/homoserine
dehydrogenase, putative / AK-HSDH, putative similar to
gb|X71364 [PIR|S46497] aspartate kinase / homoserine
dehydrogenase from Arabidopsis thaliana
Length = 916
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 67 LSKILQQSDKQRKIKYGQSHICSNGSSHPLLHTET*IQEMNYKQNLLACFCKGLLSYIVH 246
L + L+ D QRK + + G+ P++ T + E K + C G LSY+ +
Sbjct: 680 LDQYLKLRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGICSGTLSYLFN 739
Query: 247 N 249
N
Sbjct: 740 N 740
>At4g19710.1 68417.m02894 bifunctional aspartate kinase/homoserine
dehydrogenase, putative / AK-HSDH, putative similar to
gb|X71364 [PIR|S46497] aspartate kinase / homoserine
dehydrogenase from Arabidopsis thaliana
Length = 859
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 67 LSKILQQSDKQRKIKYGQSHICSNGSSHPLLHTET*IQEMNYKQNLLACFCKGLLSYIVH 246
L + L+ D QRK + + G+ P++ T + E K + C G LSY+ +
Sbjct: 680 LDQYLKLRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGICSGTLSYLFN 739
Query: 247 N 249
N
Sbjct: 740 N 740
>At3g14540.1 68416.m01842 terpene synthase/cyclase family protein
similar to terpene synthase GB:CAA72074 from
[Arabidopsis thaliana]
Length = 602
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 35 DSSVDESQLKGLAKYFNSQTNRGRLNTARATYAVMGA 145
D SV ES L GL YF Q + GR+ A+ ++ A
Sbjct: 317 DRSV-ESHLGGLGPYFEPQYSLGRIIVAKTIMIIVVA 352
>At1g22100.1 68414.m02763 hypothetical protein
Length = 457
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 133 SNGSSHPLLHTET*IQEMNYKQNLL 207
S SSH LH ET QE YK + +
Sbjct: 395 SKSSSHSNLHLETTKQEFEYKVHFI 419
>At4g28880.1 68417.m04127 casein kinase, putative similar to similar
to casein kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 415
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 47 DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 160
+ L G A+Y + T+ G + R +G V+LYF
Sbjct: 169 ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF 206
>At4g23230.1 68417.m03350 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 507
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 20 IRMAGDSSVDESQLKGLAKYFNSQTNRGRLNTA 118
IRM G+ S+D++Q+ + +S N+ + A
Sbjct: 20 IRMNGNISIDQNQMNRFKDFVSSTMNQAAVKAA 52
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 235 NLTIPYRNMLINFACNSFLGFRFQCEVK 152
NL+IP NML N ++ L +F C +K
Sbjct: 828 NLSIPCTNMLSNLFRSADLDSQFACMLK 855
>At1g66830.1 68414.m07596 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00069:
Eukaryotic protein kinase domain, multiple PF00560:
Leucine Rich Repeat
Length = 685
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 256 DFNYVLYNLTIPYRNMLINFACNSFLGFRFQC--EVKDDCS 140
D +Y + IP N+L+N N+F G F C +K CS
Sbjct: 242 DLSYNNLSGPIPKFNVLLNAGPNAFQGNPFLCGLPIKISCS 282
>At4g28100.1 68417.m04031 expressed protein
Length = 304
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +1
Query: 82 QQSDKQRKIKYGQSHICSNGSSHPLLHTET*IQEMNYKQNLLACFC 219
+ SD +K S C N LL + I + N + + CFC
Sbjct: 98 ESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFC 143
>At1g03930.1 68414.m00378 protein kinase (ADK1) identical to dual
specificity kinase 1 (ADK1) [Arabidopsis thaliana]
gi|1216484|gb|AAB47968; supported by cDNA gi:18700076
and gi:1216483. Note: differences between cDNAs in the
11th exon, possibly due to errors or alternative
splicing.
Length = 471
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 47 DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 160
+ L G A+Y + T+ G + R +G V++YF
Sbjct: 169 ENKNLTGTARYASVNTHLGVEQSRRDDLEALGYVLMYF 206
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,999,496
Number of Sequences: 28952
Number of extensions: 78228
Number of successful extensions: 177
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 12,070,560
effective HSP length: 68
effective length of database: 10,101,824
effective search space used: 222240128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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