Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o23
         (325 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L00968-1|AAA29012.1|  493|Drosophila melanogaster UMP synthase; ...    38   0.003
AY058714-1|AAL13943.1|  493|Drosophila melanogaster LD45235p pro...    38   0.003
AE014297-2922|AAF55842.1|  493|Drosophila melanogaster CG3593-PA...    38   0.003
AE013599-432|AAF59242.1|  866|Drosophila melanogaster CG1616-PA ...    28   3.2  
U31961-16|AAA84415.1|  335|Drosophila melanogaster protein ( Dro...    26   9.7  
AY122180-1|AAM52692.1|  359|Drosophila melanogaster LD37858p pro...    26   9.7  
AE014297-2253|AAF55351.1|  359|Drosophila melanogaster CG14906-P...    26   9.7  

>L00968-1|AAA29012.1|  493|Drosophila melanogaster UMP synthase; r-l
           gene product protein.
          Length = 493

 Score = 37.9 bits (84), Expect = 0.003
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 1   DVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRIS 105
           D+ VVGRGI  A +P+  A  Y+D LW  Y  R++
Sbjct: 458 DIGVVGRGILKASSPKQAAQTYRDRLWAAYQDRVA 492


>AY058714-1|AAL13943.1|  493|Drosophila melanogaster LD45235p
           protein.
          Length = 493

 Score = 37.9 bits (84), Expect = 0.003
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 1   DVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRIS 105
           D+ VVGRGI  A +P+  A  Y+D LW  Y  R++
Sbjct: 458 DIGVVGRGILKASSPKQAAQTYRDRLWAAYQDRVA 492


>AE014297-2922|AAF55842.1|  493|Drosophila melanogaster CG3593-PA
           protein.
          Length = 493

 Score = 37.9 bits (84), Expect = 0.003
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 1   DVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRIS 105
           D+ VVGRGI  A +P+  A  Y+D LW  Y  R++
Sbjct: 458 DIGVVGRGILKASSPKQAAQTYRDRLWAAYQDRVA 492


>AE013599-432|AAF59242.1|  866|Drosophila melanogaster CG1616-PA
           protein.
          Length = 866

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = -1

Query: 292 LITKFGM--LVLDPIMEDFNSAFKKHIVSGYFVSQ 194
           L+++F +  LVLDP  E F+     H+VS Y+V++
Sbjct: 642 LLSRFDLIFLVLDPQDEIFDKRLASHLVSLYYVTR 676


>U31961-16|AAA84415.1|  335|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 335

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 304 EDFILITKFGMLVLDPIMEDFNSAFKKHIVSGYFVSQI 191
           ED  L+ ++  L+  P+  + +S  K+H   GY V Q+
Sbjct: 104 EDLHLVNEYLELLSKPVEPEDSSPMKRHWEDGYNVPQL 141


>AY122180-1|AAM52692.1|  359|Drosophila melanogaster LD37858p
           protein.
          Length = 359

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 304 EDFILITKFGMLVLDPIMEDFNSAFKKHIVSGYFVSQI 191
           ED  L+ ++  L+  P+  + +S  K+H   GY V Q+
Sbjct: 69  EDLHLVNEYLELLSKPVEPEDSSPMKRHWEDGYNVPQL 106


>AE014297-2253|AAF55351.1|  359|Drosophila melanogaster CG14906-PA
           protein.
          Length = 359

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 304 EDFILITKFGMLVLDPIMEDFNSAFKKHIVSGYFVSQI 191
           ED  L+ ++  L+  P+  + +S  K+H   GY V Q+
Sbjct: 69  EDLHLVNEYLELLSKPVEPEDSSPMKRHWEDGYNVPQL 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,782,191
Number of Sequences: 53049
Number of extensions: 180394
Number of successful extensions: 370
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)