Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o23
         (325 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35641-4|CAA84708.1|  497|Caenorhabditis elegans Hypothetical pr...    32   0.11 
Z29443-13|CAA82579.1|  497|Caenorhabditis elegans Hypothetical p...    32   0.11 
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr...    27   4.1  
Z35603-2|CAA84674.1|  418|Caenorhabditis elegans Hypothetical pr...    27   4.1  
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical...    26   7.2  
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical...    26   7.2  
Z78200-7|CAB01586.1|  284|Caenorhabditis elegans Hypothetical pr...    25   9.5  
Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical p...    25   9.5  
AL023853-1|CAA19558.1|  370|Caenorhabditis elegans Hypothetical ...    25   9.5  

>Z35641-4|CAA84708.1|  497|Caenorhabditis elegans Hypothetical
           protein T07C4.1 protein.
          Length = 497

 Score = 31.9 bits (69), Expect = 0.11
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 1   DVIVVGRGITAAKNPEVQAVAYKDALW 81
           D+I+VGRG+T++  P  Q   Y+   W
Sbjct: 461 DIIIVGRGVTSSSEPVQQLKRYRQIAW 487


>Z29443-13|CAA82579.1|  497|Caenorhabditis elegans Hypothetical
           protein T07C4.1 protein.
          Length = 497

 Score = 31.9 bits (69), Expect = 0.11
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 1   DVIVVGRGITAAKNPEVQAVAYKDALW 81
           D+I+VGRG+T++  P  Q   Y+   W
Sbjct: 461 DIIIVGRGVTSSSEPVQQLKRYRQIAW 487


>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
           protein AC3.5 protein.
          Length = 1090

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 4   VIVVGRGITAAKNPEVQAVAYKDALWKCYIKRISGKLE 117
           V V  + I +  +    A  Y D LWK + K + GKL+
Sbjct: 596 VNVFNKAIRSFVSSYRSAYPYDDGLWKSFEKALGGKLK 633


>Z35603-2|CAA84674.1|  418|Caenorhabditis elegans Hypothetical
           protein T02C12.2 protein.
          Length = 418

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 9/30 (30%), Positives = 21/30 (70%)
 Frame = -1

Query: 313 SLKEDFILITKFGMLVLDPIMEDFNSAFKK 224
           ++KE+ + + + G +++D  M+DF+S  +K
Sbjct: 21  TVKEEMLEVRELGEVIIDRTMDDFDSKTEK 50


>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
           protein Y105E8A.23b protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/38 (34%), Positives = 25/38 (65%)
 Frame = -1

Query: 304 EDFILITKFGMLVLDPIMEDFNSAFKKHIVSGYFVSQI 191
           ++ I  ++F   VL+PI+++  +AFKK +  GY  ++I
Sbjct: 369 QNLIGASQFQFDVLEPILKELGNAFKKEM--GYDENEI 404


>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
           protein Y105E8A.23a protein.
          Length = 1138

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/38 (34%), Positives = 25/38 (65%)
 Frame = -1

Query: 304 EDFILITKFGMLVLDPIMEDFNSAFKKHIVSGYFVSQI 191
           ++ I  ++F   VL+PI+++  +AFKK +  GY  ++I
Sbjct: 369 QNLIGASQFQFDVLEPILKELGNAFKKEM--GYDENEI 404


>Z78200-7|CAB01586.1|  284|Caenorhabditis elegans Hypothetical
           protein T04H1.10 protein.
          Length = 284

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +3

Query: 198 DTKYPLTMC---FLKAELKSSIIGSNTSIPNFVIRIKSSFK 311
           DT Y + +    FLKA+L  SII    +IP+  I  +SS +
Sbjct: 8   DTLYSIILLSDYFLKAQLILSIISLVLTIPHIFILTRSSIR 48


>Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical
           protein T04A8.13 protein.
          Length = 791

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 165 PKCQYCKNYICDTKYPLTMCFLKAELKSSIIG 260
           P  +Y  N+ICD ++ + +CF   E + +++G
Sbjct: 471 PGKRYFLNFICDWQHDIAICF--CEERRTLLG 500


>AL023853-1|CAA19558.1|  370|Caenorhabditis elegans Hypothetical
           protein Y71A12C.1 protein.
          Length = 370

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 171 CQYCKNYICDTKYPLTMC 224
           CQ C N  C++KY   +C
Sbjct: 6   CQICSNPKCESKYGFFLC 23


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,415,302
Number of Sequences: 27780
Number of extensions: 106683
Number of successful extensions: 273
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)