Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o23
         (325 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    24   0.40 
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    24   0.40 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   2.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   6.5  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 24.2 bits (50), Expect = 0.40
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 268 VLDPIMEDFNSAFKK 224
           + DPI+ED++  FKK
Sbjct: 64  LFDPIIEDYHGGFKK 78


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.40
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 268 VLDPIMEDFNSAFKK 224
           + DPI+ED++  FKK
Sbjct: 80  LFDPIIEDYHGGFKK 94


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 63  SYSLNFWILCCCDTSSDNNYV 1
           SYS N   LC CD  +   Y+
Sbjct: 662 SYSSNNKTLCKCDAQNCRRYL 682


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -3

Query: 308 ERRFYSYHK 282
           ERRF+S+H+
Sbjct: 503 ERRFFSFHQ 511


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,190
Number of Sequences: 438
Number of extensions: 1286
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)