Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o22
         (579 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   2.3  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   9.5  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   9.5  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    23   9.5  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 360 HGVERDHRGRQSGFEKRQRKP 422
           HGV R    R+ G + R+RKP
Sbjct: 208 HGVNRPLAMRKDGIQTRKRKP 228


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 7   SLKVLGLLVCYIHKSFVFYY 66
           S+ + GL   Y H  +++YY
Sbjct: 135 SVLIFGLCAIYPHTGYLYYY 154


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
 Frame = +1

Query: 265 ELARVEDEIATLRTVLQS---KIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQK 435
           +LA V+DE+  LRT ++    +IR    L  K   T+     +  ++  + V   + Y  
Sbjct: 327 QLAAVDDELKKLRTSIEEQEHRIRNREALVAKTDSTIDTYRADIESKKQEYVALKEAYGT 386

Query: 436 TESVIKTTAEKTSSIIGGI 492
               ++    K ++I  G+
Sbjct: 387 VRRTLQDVQAKQAAIERGM 405


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 133 NMSGVQTAEEAMSGTGVAGDIHTPDELAGLTPEQ 234
           N  G     +++ GTG +     P  L  +TP+Q
Sbjct: 195 NSLGTSLDAQSIEGTGASEPTKLPIPLRPITPDQ 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,628
Number of Sequences: 2352
Number of extensions: 9681
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)