Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o21
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.32 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   1.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 79  YDYHYMYLMIILPNALYRIFINFSIHNLTVGNLYVF 186
           Y ++Y +++++     Y  FI F++H L +  +Y F
Sbjct: 101 YYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 309 DHENQLHEYISKILQNLLDPR**PFWEVQYLISLI 205
           D   ++ +Y+S  L+N+ D R  P  E  YL  LI
Sbjct: 8   DFAKEMIDYVSGYLENIRDRRVLPTVEPGYLRPLI 42


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 274 FRNILVQLILVVPLYFFTLAVQNYL-MAIAGAPT 372
           F+N   QL+L + +Y  ++    Y+ +A  G PT
Sbjct: 130 FKNAYFQLVLSISVYSSSVGYTQYVRIAAKGLPT 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,191
Number of Sequences: 336
Number of extensions: 3443
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)