Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o20
         (599 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818...    28   6.6  

>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
            26481936-26482081,26482185-26482341,26482489-26482547,
            26482787-26482946,26483020-26483169,26483279-26483415,
            26483518-26483664,26483733-26483834,26483917-26483974,
            26484084-26484185,26484322-26484379,26484717-26484775,
            26486488-26486525,26486688-26486814,26486900-26487067,
            26487879-26488010,26488089-26488198,26488273-26488333,
            26488761-26488938,26489041-26489246,26489431-26489550,
            26489631-26489729,26489968-26490156,26490291-26490430,
            26491149-26491316,26491438-26491605,26491764-26491931,
            26492250-26492417,26492533-26492700,26492853-26493020,
            26493118-26493285,26493471-26493638,26493756-26493920,
            26494679-26494850,26495012-26495175,26495296-26495405,
            26495481-26495596,26495686-26495766,26495849-26496034,
            26496203-26496547,26496637-26496777,26496869-26496916,
            26497162-26497242,26497350-26497406,26497495-26497575,
            26497675-26497757,26497842-26497968
          Length = 2159

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -1

Query: 410  LNSLSTLAVLLRLSFPD*SASIDSRRITQHT*HFITEYFLQVSRLVQS 267
            L++LSTL+VLL+LSF    A+I     T H   F  E   Q S+   S
Sbjct: 1851 LSNLSTLSVLLQLSFKTTRAAIS----TPHRRRFSYERIFQASQTSNS 1894


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,581,888
Number of Sequences: 37544
Number of extensions: 200818
Number of successful extensions: 346
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)