Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10o20
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000697-1|AAH00697.1|  656|Homo sapiens nucleoporin 85kDa protein.    70   5e-12
AK022611-1|BAB14130.1|  656|Homo sapiens protein ( Homo sapiens ...    70   5e-12
AF514995-1|AAM76706.1|  656|Homo sapiens nucleoporin Nup75 protein.    70   5e-12
AF498261-1|AAM18528.1|  656|Homo sapiens frount protein protein.       70   5e-12

>BC000697-1|AAH00697.1|  656|Homo sapiens nucleoporin 85kDa protein.
          Length = 656

 Score = 70.1 bits (164), Expect = 5e-12
 Identities = 32/65 (49%), Positives = 41/65 (63%)
 Frame = +2

Query: 2   YCEFHRMYKNKEFRKAAQLLISLITSKIAPDFFWETXXXXXXXXXESDEAMFTADDTYDM 181
           Y EFHRMY  K F  AA LL+SL+TS+IAP  FW T         E  + +F+A+ TY++
Sbjct: 541 YREFHRMYGEKRFADAASLLLSLMTSRIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL 600

Query: 182 MLCLE 196
           M CLE
Sbjct: 601 MRCLE 605


>AK022611-1|BAB14130.1|  656|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12549 fis, clone NT2RM4000689. ).
          Length = 656

 Score = 70.1 bits (164), Expect = 5e-12
 Identities = 32/65 (49%), Positives = 41/65 (63%)
 Frame = +2

Query: 2   YCEFHRMYKNKEFRKAAQLLISLITSKIAPDFFWETXXXXXXXXXESDEAMFTADDTYDM 181
           Y EFHRMY  K F  AA LL+SL+TS+IAP  FW T         E  + +F+A+ TY++
Sbjct: 541 YREFHRMYGEKRFADAASLLLSLMTSRIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL 600

Query: 182 MLCLE 196
           M CLE
Sbjct: 601 MRCLE 605


>AF514995-1|AAM76706.1|  656|Homo sapiens nucleoporin Nup75 protein.
          Length = 656

 Score = 70.1 bits (164), Expect = 5e-12
 Identities = 32/65 (49%), Positives = 41/65 (63%)
 Frame = +2

Query: 2   YCEFHRMYKNKEFRKAAQLLISLITSKIAPDFFWETXXXXXXXXXESDEAMFTADDTYDM 181
           Y EFHRMY  K F  AA LL+SL+TS+IAP  FW T         E  + +F+A+ TY++
Sbjct: 541 YREFHRMYGEKRFADAASLLLSLMTSRIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL 600

Query: 182 MLCLE 196
           M CLE
Sbjct: 601 MRCLE 605


>AF498261-1|AAM18528.1|  656|Homo sapiens frount protein protein.
          Length = 656

 Score = 70.1 bits (164), Expect = 5e-12
 Identities = 32/65 (49%), Positives = 41/65 (63%)
 Frame = +2

Query: 2   YCEFHRMYKNKEFRKAAQLLISLITSKIAPDFFWETXXXXXXXXXESDEAMFTADDTYDM 181
           Y EFHRMY  K F  AA LL+SL+TS+IAP  FW T         E  + +F+A+ TY++
Sbjct: 541 YREFHRMYGEKRFADAASLLLSLMTSRIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL 600

Query: 182 MLCLE 196
           M CLE
Sbjct: 601 MRCLE 605


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,510,865
Number of Sequences: 237096
Number of extensions: 1222474
Number of successful extensions: 1310
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)